Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2373 ATGATGGAAGGTATGGTTCTCAAGCTTCCATCCTTCCATTCCCAATTCCAATTCATAAACCCTAGTCGCTGCATTTCCTCTTTCTCCTCCACTCTTCCTACTTCCTCTTCCCCTTTTCTCCGATTCCGCAACCGCCGATTTTCCTCTCCCTTCTCAGTATCTGCTTCTGCTTCCACCTCCAGGGAAACCGACAGCTTGCATCTTAACTCTCTTTCGCTTGGCCACACAACCCGTCCTGATTTCCCCATACTCCATCAGGAAGTAAATGGCTCCAAGCTTGTCTACTTGGACAACGCTGCCACCTCTCAGAAACCTATTGCTGTGTTGAAAGCTTTGCAGAATTATTATGAGTCTTACAATTCAAATGTTCATCGTGGCATACACTCCTTGAGTGCGAAAGCAACTGACGAGTATGAGCGGGCAAGAAAGAAAGTTGCGTCTTTTATCAATGCTGGAGAAGCTAAAGAGATTGTTTTTACCAGGAATGCAACTGAAGCTATCAATTTAGTGGCTTATTCTTGGGGCCTAGCAAATATAAAATCAGGAGATGAGATCATACTTACAGTTGCTGAACATCATAGTGCCATTGTACCTTGGCAACTTGTAGCTGAAAGGACTGGTGCTATTCTGAAGTTTGTGAGTTTAGGTGAACATGATGTTCCAAACTTAAAAGACTTAAAGGAGATGTTTTCAACAAAAACGAAGCTTGTGGTTACCCATCATGTCTCAAATGTACTAGCATCTGTTCTTCCAATAGAAGAAATAGTTGGCTTGGCACATCGTTTTGGGGCAAAGGTGCTAGTAGATGCATGCCAGAGTGTTCCACATATGGTTGTTGACGTCCAGGTGCTTGATGCTGACTTTCTTGTTGCTTCTTCTCACAAGATGTGTGGGCCTACAGGCATCGGATTTTTGTATGGAAAGATTGATCTGCTGTCTGCAATGCCTCCATTCTTAGGTGGTGGAGAGATGATCTCAGATGTATTTCTTGACCATTCCACATTTGCACAACCTCCTTCCAGATTTGAGGCTGGGACACCAGCAATTGGAGAAGCAATTGGATTGGGTGCTGCTATTGATTATTTGTCCGGAATTGGAATGCAAAAGATTCATAGTTATGAAGAAGAATTGGCGAATTATCTATATGAAAACCTTCGTGCAGTCCCTAACATTCGGATATATGGCCCAGCTCCCACCGCACATGTTCAACGTGCTGCTCTGTGTTCTTTCAACATTGGAGACACTCATCCAACCGACATAGCAACCTTTCTCGATCAACAGCATGGTGTAGCCATTAGATCAGGACATCACTGTGCGCAGCCCCTCCATCGGGCTCTTGGTGTCAGCTCAAGCGCACGAGTTAGCCTTTACTTCTACAACACAAAAGAGGATGTGGACTACTTTATCCAGGCTCTAAATGACACGCCTCGGGGGAAGCTTCTACTTGAATCATCCATGGATTTTGATCGAACTCAAATCGAAAACGAAAGGAGAAACTTACATGGAGAAAGATTTGGCCAAAACGCAGCTCCTCAATCAAGAATCGCAAGAGTAATATCTCGATCATTGTTCTTCGCTGTGATTCTCCTCTTAATTCCTCACATTGGTCCCATATTCAACGACCAAGGAAAATTCCTCTCCTTCGATTCCACAAACCCTAACTCCATAACAAAACAAGAATTCTATGACTTAATCGACGAATTGAAAACCGTCGAAATTCTCACAAAGGAGAAAAAGAGCCTTGTGTTGATTCCAGGATCGAATTCAATCAACGAAGCCCCGAATCACTATGCAGATTACCTGAGAAGTATGGGAGCCGATGTAGTAATAGAGAACAATTTTTTGTTTGGAGGCTCCTTTAAGAACGAATCGTTTGATATTGTGTTCACGCTAGGGCAATTCGGAGCCGGATTTGTTGACCGTGTTCTTAAAAGTGGCGGCGCAGTGGTTGTTCCGGCGAAGGATATGTCTCTAAATGTGTATCTTGATGAGTTGAATTATACGTGCGTTTATTTAAAGCCTTACAGTCTTGAATCGATCATCATGGTGGTGGTGAAACCAACGCCGTCTGATCAATCAGATGCCGATGAGTTACGCCGCCGCCCAAATTGGCGTCTTGAAGGAGTTTTCGGCAGTAAGGAAGAACTAATGGCGGCTCGGGCTGTTGTTCCTCAGCGACAACTTAGAATCAGAGATGAAGGTAAGCCGAAGGTCGTAGCGGTGGAAGGAAGAACAAGACGAATTCTTAAGGATATAGGAAATCTAGTGCCTGATCGAGCCATAGAAGGGAAACCCGGAACTCAACCAGCAGAGAAGAATAAGAAGGGAATCACCCAAAAGGTGGATGGAGGAGTTGGGAAGGGAGTCAATGCAACGAAGGCTGGAGTAACTGAGAAACCGAAACTGAAGACTGTAATCCGCTCCAGCGACGAGAGATATATGAGCAACGTCAAAGATACTAAATCAAAGGACAAGAAAAAGAGATCTCTGAGTTCAACCCTTAGTGCCAGAAGCAAGGCTGCTTGTGGACTCACCAACAAACCACTGGATTCTTCAGTAGCTAATATTGATGAAGCAGATGCCAACAATGAATTAGCCGTAGTAGAATACATTGATGACATGTATAAGTTTTACAAGCTTGCAGAAGATGAGAGTAGAGTATCAGATTACATGGGAGCACAGCCAGATTTGAATGCTAAGATGAGATCCATTCTCATAGATTGGTTGATAGAAGTTCATCGAAAGTTTGAACTGATGCCGGAAACCCTTTACCTCACTGTAAACATCGTCGACCGATTCCTTTCCTTGAAGACTGTACCTAGGAAGGAACTTCAATTGCTTGGTATCAGCTCTATGCTGATAGCATGCAAATATGAAGAGATTTGGGCCCCAGAGGTCAATGACTTTGTAAGTATATCTGCAAATACTTATCAAAGAGAACAAATTTTGGTGATGGAGAAAGTAGTACTGGGTAGGTTGGAATGGCTTTTAACTGTTCCTACCCCTTATGTTTTTCTTGTTCGATATGTCAAGGCTTCTGAGCCATCTGATGATGAGATGGAGAATATGGTATTTTTTCTAGCTGAGCTTGGTCTGATGAACTATCCAATAGCAATATCATACAGCCCTTCAATGATTGCTTCAGCGGCTGTTTATGCTGCAAGATGCACACTTGAAAAGAGCCCAATCTGGACAGCAACTTTGCATCACCATACAGGCTATGTTGAAGAAGAGTTGAAGGAATGTGCAAAACTCCTTGTGAACTTACACCGTGGAGCTGTAGATTCAAAACTCAAGGCTGTATACAGAAAATATTCAAGTCCCGATCGCCGTGCCGTTTCTCTTCTTCCTCCAGCTAAGAGCTTTACTCCAGATTGTAGTCCAGAAATCTCCTATGCTTTAAGTGGAGATGTTGGTTGCTAG 3423 43.44 MMEGMVLKLPSFHSQFQFINPSRCISSFSSTLPTSSSPFLRFRNRRFSSPFSVSASASTSRETDSLHLNSLSLGHTTRPDFPILHQEVNGSKLVYLDNAATSQKPIAVLKALQNYYESYNSNVHRGIHSLSAKATDEYERARKKVASFINAGEAKEIVFTRNATEAINLVAYSWGLANIKSGDEIILTVAEHHSAIVPWQLVAERTGAILKFVSLGEHDVPNLKDLKEMFSTKTKLVVTHHVSNVLASVLPIEEIVGLAHRFGAKVLVDACQSVPHMVVDVQVLDADFLVASSHKMCGPTGIGFLYGKIDLLSAMPPFLGGGEMISDVFLDHSTFAQPPSRFEAGTPAIGEAIGLGAAIDYLSGIGMQKIHSYEEELANYLYENLRAVPNIRIYGPAPTAHVQRAALCSFNIGDTHPTDIATFLDQQHGVAIRSGHHCAQPLHRALGVSSSARVSLYFYNTKEDVDYFIQALNDTPRGKLLLESSMDFDRTQIENERRNLHGERFGQNAAPQSRIARVISRSLFFAVILLLIPHIGPIFNDQGKFLSFDSTNPNSITKQEFYDLIDELKTVEILTKEKKSLVLIPGSNSINEAPNHYADYLRSMGADVVIENNFLFGGSFKNESFDIVFTLGQFGAGFVDRVLKSGGAVVVPAKDMSLNVYLDELNYTCVYLKPYSLESIIMVVVKPTPSDQSDADELRRRPNWRLEGVFGSKEELMAARAVVPQRQLRIRDEGKPKVVAVEGRTRRILKDIGNLVPDRAIEGKPGTQPAEKNKKGITQKVDGGVGKGVNATKAGVTEKPKLKTVIRSSDERYMSNVKDTKSKDKKKRSLSSTLSARSKAACGLTNKPLDSSVANIDEADANNELAVVEYIDDMYKFYKLAEDESRVSDYMGAQPDLNAKMRSILIDWLIEVHRKFELMPETLYLTVNIVDRFLSLKTVPRKELQLLGISSMLIACKYEEIWAPEVNDFVSISANTYQREQILVMEKVVLGRLEWLLTVPTPYVFLVRYVKASEPSDDEMENMVFFLAELGLMNYPIAISYSPSMIASAAVYAARCTLEKSPIWTATLHHHTGYVEEELKECAKLLVNLHRGAVDSKLKAVYRKYSSPDRRAVSLLPPAKSFTPDCSPEISYALSGDVGC 1140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 41000627 41011551 + CePI673135_02g023730.1 Cec02g2373 197426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2373 1140 CDD SufS_like 94 472 IPR010970 GO:0006534(InterPro)|GO:0030170(InterPro)|GO:0031071(InterPro)
Cec02g2373 1140 SUPERFAMILY PLP-dependent transferases 77 474 IPR015424 -
Cec02g2373 1140 MobiDBLite consensus disorder prediction 813 833 - -
Cec02g2373 1140 FunFam G2/mitotic-specific cyclin-1 995 1114 - -
Cec02g2373 1140 Pfam Cyclin, C-terminal domain 1000 1118 IPR004367 -
Cec02g2373 1140 Gene3D Aspartate Aminotransferase, domain 1 78 472 IPR015422 -
Cec02g2373 1140 FunFam G2/mitotic-specific cyclin 886 994 - -
Cec02g2373 1140 SUPERFAMILY Cyclin-like 1001 1121 IPR036915 -
Cec02g2373 1140 MobiDBLite consensus disorder prediction 813 831 - -
Cec02g2373 1140 Pfam Cyclin, N-terminal domain 873 997 IPR006671 -
Cec02g2373 1140 SUPERFAMILY Cyclin-like 862 995 IPR036915 -
Cec02g2373 1140 Pfam Aminotransferase class-V 94 468 IPR000192 -
Cec02g2373 1140 CDD CYCLIN_AtCycB-like_rpt2 1000 1118 - -
Cec02g2373 1140 CDD CYCLIN_AtCycB-like_rpt1 851 995 - -
Cec02g2373 1140 Gene3D - 873 1115 - -
Cec02g2373 1140 ProSitePatterns Cyclins signature. 902 933 IPR048258 -
Cec02g2373 1140 PANTHER CYSTEINE DESULFURASE 61 475 - -
Cec02g2373 1140 Gene3D - 887 998 - -
Cec02g2373 1140 SMART cyclin_7 907 991 IPR013763 -
Cec02g2373 1140 SMART cyclin_7 1004 1088 IPR013763 -
Cec02g2373 1140 Gene3D - 105 365 IPR015421 -
Cec02g2373 1140 SMART Cyclin_C_2 1000 1119 IPR004367 -
Cec02g2373 1140 MobiDBLite consensus disorder prediction 759 787 - -
Cec02g2373 1140 NCBIfam SufS family cysteine desulfurase 77 475 IPR010970 GO:0006534(InterPro)|GO:0030170(InterPro)|GO:0031071(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2373 Cec-Chr2:41000627 Cec04g0653 Cec-Chr4:25420608 8.00E-111 dispersed
Cec02g2373 Cec-Chr2:41000627 Cec05g1888 Cec-Chr5:30937193 1.20E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2373 K11717 - csv:101222630 852.818