Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2378 ATGAAATATTGCATTGATGCCGTCGGACTTACAAGATTGGTAATTTTCCTAGCAGCTTTTTCAGCCATCTTCGGCGCATCGCCGCCGGTTCCGACCGAAAAGTCGAAATTAGACAGCTGGTTTTCAGAAAATGTGAAGCCCTTCGCTGATCGTAAGGCGGAGCTTGATCCGGCACTTGTGACTGCAGAAGAAAACGCCACCGTGGTAAAAGTAAGGGCCGACGGAAGTGGAGATTTCAAGACAATCACCGAAGCCATTAACAGCGTGCCAGCTGGCAACACGAGACGTGTAGTGATTTGGATTGGAGAAGGAGTTTACAAAGAGAAGCTTAAGATTGATAGAAATAAGCCTTTCGTTACTCTTTATGGCTCTCCTAATAATATGCCTAAATTGACCTTTGATGGCGATGCTGCCAAATACGGCACCGTTTACAGTGCAACCTTGATTGTTGAGTCTGATTATTTCACCGCCGCCAATCTCATCATTGAGAATTCATCCCCAAGGCCAGATGGGAAAAGAAAAGGAGCACAAGCATTAGCAGCAAGACTGTTAGGGACTAAAGCGGCAGTTTACAATTGCAAATTCTATGGATTTCAAGATACCCTTTGCGACGACGACGGTTTGCATCTCTACAAAGATTGCTTCATTCAAGGCACCGTCGACTTCATTTTCGGAAAGGGAACATCTCTTTATTTGAATAGTCAATTGGATGTGGTGGGAGACGGAGGATTGGGAGTGATCACGGCCCATTCAAGGGAACATGAATCAGATGGAAGTGGATATTCGTTCGTTCATTGTAGCATTACGGGAACTGGCGGCAAAAACACTTATTTGGGAAGAGCTTGGATGCCCAGATCTAGGGTTGTCTTCGCCTACACTACAATGGCTGACATCATTCATTCCGAAGGCTGGAATGATATGAACCATGCCGGTTATGATGCTACGGTTTTGTTCGGAGAATACAAGTGTTCGGGGCCGGGATCGGAGCCGAGCGGACGCGTAAAATACAGCAAGCAATTGAGTGATATAGAAGTGAACCCGTTTATTAGTCTTGGTTACGTGCAGAGCGAGAAGTGGCTGCTTCCTCCTCCTAATCCTCAAGCTTAA 1107 45.98 MKYCIDAVGLTRLVIFLAAFSAIFGASPPVPTEKSKLDSWFSENVKPFADRKAELDPALVTAEENATVVKVRADGSGDFKTITEAINSVPAGNTRRVVIWIGEGVYKEKLKIDRNKPFVTLYGSPNNMPKLTFDGDAAKYGTVYSATLIVESDYFTAANLIIENSSPRPDGKRKGAQALAARLLGTKAAVYNCKFYGFQDTLCDDDGLHLYKDCFIQGTVDFIFGKGTSLYLNSQLDVVGDGGLGVITAHSREHESDGSGYSFVHCSITGTGGKNTYLGRAWMPRSRVVFAYTTMADIIHSEGWNDMNHAGYDATVLFGEYKCSGPGSEPSGRVKYSKQLSDIEVNPFISLGYVQSEKWLLPPPNPQA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 41028933 41030714 + CePI673135_02g023780.1 Cec02g2378 197431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2378 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 360 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cec02g2378 368 Pfam Pectinesterase 69 353 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec02g2378 368 Gene3D - 62 363 IPR012334 -
Cec02g2378 368 FunFam Pectinesterase 64 362 - -
Cec02g2378 368 SUPERFAMILY Pectin lyase-like 66 361 IPR011050 -
Cec02g2378 368 ProSitePatterns Pectinesterase signature 2. 216 225 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2374 Cec-Chr2:41014948 Cec02g2378 Cec-Chr2:41028933 3.00E-216 dispersed
Cec02g2378 Cec-Chr2:41028933 Cec03g1540 Cec-Chr3:33510589 6.90E-96 dispersed
Cec02g2377 Cec-Chr2:41024124 Cec02g2378 Cec-Chr2:41028933 2.10E-217 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2378 K01051 - csv:101205095 615.92