Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2427 ATGCGCTGCTGTCGCTACTTTAAAGATGCGGTCCCCACTTTTGCGCCAAGCGTTTCCCGGACTTTGCTCGTCAAATGCGTGTCACTGGGTGAAGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGGGTCGTTGCTTTACTCCAATTACTGTGCTCTCTCACTTCCCAGCGGTTGTTTCCTGAATCTAGGGCTTTGGATTTCCAGAATTTTCCATCCAAGAAGACCTGAAGAAATTAAAGTTGTAGAGCATTTTACTTCCAAGGAAGTGATAAGCCTCATTCAAGCGAACAATGAGCAATGCTCTGCACAAGGATTGGATACAGTCAAAGCTGATGGCTTCTTCTCTGTTTATCCAACATTTGCTCTGCATGGTATGCAGTCAAAGTCTAAAAGTGTGAATCATCTAGGATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCCCCGCCACCAGCAGGAGGGAATGTGTCCAATTCAACATCACTGGAATGTACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCGATGTCAAATGATGATTTAAATGAAGACGATGATGATGATACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCACGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGTGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTCGAGTTCTACTCTGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCGTCGCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGAAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAACGGCAGTAGCCAATTCCATAATTACAGTAGCTTCCAAGCTTCTCCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCAGGACAGCAGCGAAGTGTCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTACCAAATATATTTCTACTATATGATTCCTGATTTCAGCATCCATTGGAATATTGTTATCCCAGGTGGCAGTGAGGACAGCCATATTCTGGATAAGAGTGTGCCAATACTGGTTGCCAAACACACTGCTCGCACAGTTATCAGCTTCTTCTCTGTGATGACACAACATTATCTTGAAGGCATTTTCATGTGGCAGTGGTTAATTAGCAGCTCCCAGATGCTTTCCCTTCAGTCTCTCTTCAATCAAAACCAGCGGCCGCCATTGATAGCCACCAAGAAATGCTCTGATGATGTTTTGAGGAGGAGGAGTTTTCACCCATTTCGTTATTCTGCTTCTCGTTGTTGCATTGTGTGTGCAAGGGAGACAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATCAGCAGCTTCAATCTTTCTCCAAGAAACAAGTCACTTCTCCCAAGAAGAAAGTTCAAGATATGGAACTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGGGGCCCTTTTAGCAAATTCAGCTGTTGTTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTTTATGCTGTTATAAAGCCTTCCATTGATGGTCCATTACCAAGTTCTATCAGTTCTGACTTTGAGAAGGAATCTACCGAGCCATCAGTTTTGCAGCAGCTTCCACTTTCATCTCTATTTCAGATTCAAAGGCCTTCAGTTCTCCTCTCGGCCAGCTTCTCCGGCTACTCTTCCCAATGTCGTTGTGATTCCTCAATTTCAACTGAAAATCCCAGCACTCCTTCGGCTAAGCCTAAAGGTAAGCACAAGAAAAAGGCCAATCCATTTTCTGCTAAAGATGGCGGGAAGAATGTGAATGGTTCTGGTAACAAGCTTCAAGTGTTGAATGATCCAACTGGTCATGACATTTTGGCTCATTATGATCTTGGTCGCGAGCTTGGTCGAGGTGAATTTGGTGTAACATATCTATGCACAGATACAAATGCAGGTGAAAAGTTTGCTTGTAAATCTATATCAAAGAAGAAGCTTAGGACTGCTGTTGATATTGAGGATGTGCGAAGAGAGGTTCAAATAATGAAGCATTTACCCAAGCATCCGAATATCGTTACGCTGAAGGATACCTATGAGGATGATCAGGCAGTTCACATTGTGATGGAACTGTGCGAGGGTGGGGAATTGTTTGACCGAATTGTTGCAAGGGGACATTACACAGAGCGTGCAGCGGCTGTTGTTATGCGGACAATTGTTGAAGTTGTTCAGGCTTGTCATAAACATGGAGTGATGCATCGTGATCTCAAACCAGAGAATTTTCTTTTTGCAAACAAGAAGGAAACATCTCCATTGAAGGCAATCGATTTTGGACTGTCTATCACATTTAAACCAGGTGAACAATTCAATGAAATAGTAGGCAGTCCTTATTACATGGCCCCAGAGGTCCTGAAAAGGAATTATGGTCCAGAAGTCGACGTTTGGAGCGCCGGGGTTATCCTCTATATTTTACTCTGTGGCATTCCACCATTTTGGGCAGAAACTGAACAGGGTGTAGCACAGGCAATTATTCGCTCGGTTATTGATTTTAGGAGAGACCCATGGCCAAGAGTCTCTGAAAATGCAAAGGATCTCGTAAGAAAAATGCTTAATCCTGATCCTAAACGGCGCCTTACTGCTCAAGAAGTTCTAGACCATCCGTGGTTACAAAATGCTAAGAAGGCTCCAAATGTTCCATTAGGCAAGACGGTAAAAGCAAGACTCAAGCAATTTTCTGTGATGAACAAGCTCAAGAAACGAGCCCTAAGGGTGATCGCCGAGCATTTGTCGGTGGAGGAAGTAGCTGGCATAAAGGAGGCATTTGATATGATGGACATTGAAAAGAGAGGGAAGATAAATCTCGAGGAGCTGAAAAGTGGATTGCAAAAGCTTGGACAACAGATTCCAGAAACAGATCTTCAGATACTTATGGAAGCAGTTGGCGTTCAGGATGATGGAGCTCTTAACTACGGAGAGTTTGTTGCAGTTTCAATCCACCTCAAAAGGATGGCAAATGACGAGCACCTACATAAAGCTTTTGCATTCTTTGATCAAAACCAGAGTGGTTTCATTGAGATTGAAGAGCTTCGAGCTGTGCTGCTACACGATGAAGAAACGAATAGTGAGGATGTCATCAATGCCATTATGCATGATGTTGACACAGATAAGGATGGACGCATAAGCTATGAAGAGTTTGCAGCCATGATGAAGGCGGGAACCGATTGGAGAAAAGCGTCGAGACAATATTCTCGGGAAAGATTCAACAGCCTGAGCTTGAAGTTGTTCAGAGATGGGTCATTGAAACTTACTAGTTAA 3783 44.14 MRCCRYFKDAVPTFAPSVSRTLLVKCVSLGEGTVAVALEFEFPKGSLLYSNYCALSLPSGCFLNLGLWISRIFHPRRPEEIKVVEHFTSKEVISLIQANNEQCSAQGLDTVKADGFFSVYPTFALHGMQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYVNGSSQFHNYSSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIKYQIYFYYMIPDFSIHWNIVIPGGSEDSHILDKSVPILVAKHTARTVISFFSVMTQHYLEGIFMWQWLISSSQMLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFRYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVQDMELPRSQMRGEMTEISGALLANSAVVLFIFSIFYNVLFYAVIKPSIDGPLPSSISSDFEKESTEPSVLQQLPLSSLFQIQRPSVLLSASFSGYSSQCRCDSSISTENPSTPSAKPKGKHKKKANPFSAKDGGKNVNGSGNKLQVLNDPTGHDILAHYDLGRELGRGEFGVTYLCTDTNAGEKFACKSISKKKLRTAVDIEDVRREVQIMKHLPKHPNIVTLKDTYEDDQAVHIVMELCEGGELFDRIVARGHYTERAAAVVMRTIVEVVQACHKHGVMHRDLKPENFLFANKKETSPLKAIDFGLSITFKPGEQFNEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGIPPFWAETEQGVAQAIIRSVIDFRRDPWPRVSENAKDLVRKMLNPDPKRRLTAQEVLDHPWLQNAKKAPNVPLGKTVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEAFDMMDIEKRGKINLEELKSGLQKLGQQIPETDLQILMEAVGVQDDGALNYGEFVAVSIHLKRMANDEHLHKAFAFFDQNQSGFIEIEELRAVLLHDEETNSEDVINAIMHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLFRDGSLKLTS 1260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 41481306 41494132 - CePI673135_02g024270.1 Cec02g2427 197480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2427 1260 SUPERFAMILY EF-hand 1074 1250 IPR011992 -
Cec02g2427 1260 Pfam EF-hand domain pair 1093 1151 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 Pfam EF-hand domain pair 1163 1226 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 ProSitePatterns EF-hand calcium-binding domain. 1173 1185 IPR018247 -
Cec02g2427 1260 CDD STKc_CAMK 786 1044 - -
Cec02g2427 1260 SMART efh_1 1092 1120 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 SMART efh_1 1164 1192 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 SMART efh_1 1200 1228 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 Gene3D Transferase(Phosphotransferase) domain 1 873 1053 - -
Cec02g2427 1260 SUPERFAMILY Protein kinase-like (PK-like) 784 1053 IPR011009 -
Cec02g2427 1260 MobiDBLite consensus disorder prediction 331 347 - -
Cec02g2427 1260 Pfam Protein kinase domain 787 1045 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2427 1260 ProSiteProfiles EF-hand calcium-binding domain profile. 1196 1231 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 Gene3D Phosphorylase Kinase; domain 1 789 872 - -
Cec02g2427 1260 ProSitePatterns Protein kinases ATP-binding region signature. 793 816 IPR017441 GO:0005524(InterPro)
Cec02g2427 1260 Gene3D - 1054 1228 - -
Cec02g2427 1260 SMART serkin_6 787 1045 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2427 1260 MobiDBLite consensus disorder prediction 329 387 - -
Cec02g2427 1260 MobiDBLite consensus disorder prediction 435 455 - -
Cec02g2427 1260 ProSitePatterns Serine/Threonine protein kinases active-site signature. 907 919 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g2427 1260 ProSiteProfiles EF-hand calcium-binding domain profile. 1160 1195 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 Gene3D - 293 355 - -
Cec02g2427 1260 ProSitePatterns NF-YA/HAP2 subunit signature. 298 318 IPR018362 GO:0003677(InterPro)|GO:0016602(InterPro)
Cec02g2427 1260 MobiDBLite consensus disorder prediction 730 767 - -
Cec02g2427 1260 FunFam Calcium-dependent protein kinase 7 1054 1229 - -
Cec02g2427 1260 SMART cbf3 292 353 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2427 1260 FunFam calcium-dependent protein kinase 13 873 1053 - -
Cec02g2427 1260 ProSiteProfiles EF-hand calcium-binding domain profile. 1088 1123 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 ProSiteProfiles NF-YA/HAP2 family profile. 293 353 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2427 1260 ProSiteProfiles Protein kinase domain profile. 787 1045 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2427 1260 MobiDBLite consensus disorder prediction 168 195 - -
Cec02g2427 1260 PRINTS CCAAT-binding transcription factor subunit B signature 327 350 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2427 1260 PRINTS CCAAT-binding transcription factor subunit B signature 296 318 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2427 1260 FunFam Calcium-dependent protein kinase 1 789 872 - -
Cec02g2427 1260 MobiDBLite consensus disorder prediction 352 383 - -
Cec02g2427 1260 PANTHER SERINE/THREONINE-PROTEIN KINASE 755 1225 IPR050205 GO:0004683(PANTHER)|GO:0005516(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0009931(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)|GO:0046777(PANTHER)
Cec02g2427 1260 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 295 350 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g2427 1260 CDD EFh 1164 1226 IPR002048 GO:0005509(InterPro)
Cec02g2427 1260 MobiDBLite consensus disorder prediction 167 213 - -
Cec02g2427 1260 ProSitePatterns EF-hand calcium-binding domain. 1209 1221 IPR018247 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2427 Cec-Chr2:41481306 Cec04g0450 Cec-Chr4:17625659 1.30E-234 dispersed
Cec03g1373 Cec-Chr3:30752786 Cec02g2427 Cec-Chr2:41481306 1.70E-75 transposed
Cec10g1393 Cec-Chr10:28233276 Cec02g2427 Cec-Chr2:41481306 9.50E-12 wgd
Cec02g2427 Cec-Chr2:41481306 Cec03g1371 Cec-Chr3:30698250 2.70E-253 wgd
Cec02g2427 Cec-Chr2:41481306 Cec09g0410 Cec-Chr9:3528581 6.70E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29150 PF00069 Pkinase 1.30E-77 CL0016 Cec TF
71789 PF00069 Pkinase 1.30E-77 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2427 K13412 - csv:101212721 991.875