Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g2445 | ATGGGATCCATGAATTCAAACAATTGGCTTTCCTTTCCACTTTCACCTACTAATCCTTCTTTACCACCACATCTTCAAACCGCAACTCATTCCCATCATTTCTCTTTGGGAAATTTGGAGAATGATCATAATATGGACATCCCATTTCAAACCCACCATGAGTGGAATCTGATAAGTAATCAAAGTGGTGGTGAAGTTCCAAAAATAGCAGATTTTTTAGGAGTAAGCAAGGCAGAAAATGAGACAGATCTCATTGGGTTTAATGAAATTCATCATCAAAGCAATGATACAGATTATTTGTTTCCAATCACAAGATTAGTTTCTGTTCATCAACAACAACAACAACAACAACAACAACAACAACCCACTGCTCCCCCTCCTAATATAAATCTTGCCTCTTCTACTAACTTTGATCTTCAAGATAATTCCAATTGTTTGCAATCTTTAACCCTTTCAATGGGCAGTGGCAAACCCTCTACTTGTGAACAAACAACCTCCACCCCTGACAATAGTACCTCCAATAATAATAATAATAACAATAATAATACCACTCTTGATGTCACCCCTCGAAGAACTTTGGACACTTTTGGCCAAAGAACTTCCATTTATCGCGGTGTCACCAGGCATAGATGGACAGGAAGGTATGAAGCACATTTGTGGGATAATAGTTGCAGAAGGGAAGGGCAGTCCAGGAAGGGTCGGCAAGGTGGGTATGATAAAGAAGAGAAAGCAGCTAGGGCTTATGATCTTGCTGCATTGAAATACTGGGGAACATCCACCACCACAAATTTTCCTATTAGTAACTACGAGAAGGAAGTGGAGGAAATGAAGCACATGACAAGACAAGAATTTGTGGCTGCAATTAGAAGGAAAAGTAGTGGATTTTCAAGGGGAGCATCAATGTATCGTGGAGTTACAAGGCACCACCAGCATGGAAGATGGCAGGCTAGGATTGGAAGAGTAGCAGGAAACAAAGATCTTTATTTGGGAACTTTCAGTACAGAAGAGGAAGCAGCAGAAGCATATGACATAGCGGCGATAAAATTTAGAGGACTAAACGCAGTGACAAATTTCGACATGAGTCGTTATGACGTGAAAAGCATATTAGAGAGCAACACGCTCCCAATCGGTGGCGGTGCAGCGAAGCGACTAAAAGAGGCTCAAGCCATGGAATCGTCTCGAAAACGAGATGAGATGATTGCCCTAGGTTCCTCTTCCTCCTCATCCTCTTGCTTCCAATATGGAACCTCTTCCTCCTCAACTAATAATTCCTCCCATTACCCTAATTTACTCCAACAACCAAATCTCAATATGGACCATCACCTTCAAACCCAACCTTTGCTCTCTCTTCAAAACCAGCATGATATTTCTCATTACACCCACCATCATTCCTCCTCCTTCCACCACCCTTCGTCTTCTTACATCCACCACTCATCTGATCATTCCGCTTATCCTAACAACAACAGCCATCCATTCTACGGTGGAGGATATCTTCATAATCATCCCGCTTTGCTTCACGGGATGATCAATATGGGCGGTGGAGGTGGCGGAGGCGGCGGAGGAGCTTCTAGTTTGGACACTAATAACAATACTAATACCTTGAATCATTTTGAGAATAATACTAGTGGAGCAGGGTATCTTGGGAATGCATTTGGGATGGGTTCTACCTCGAACAGCAGCGGCGCCGCAGCGGAGGAATATGCGCTCGTTAAGGTTGACTATGACATGCCTAATTCTGGCGGGTACGGTGGTTGGACGGGGGATTCGGTTCAAGGTTCTAACGCTGGGGTTTTCTCTATGTGGAACGATTGA | 1812 | 43.21 | MGSMNSNNWLSFPLSPTNPSLPPHLQTATHSHHFSLGNLENDHNMDIPFQTHHEWNLISNQSGGEVPKIADFLGVSKAENETDLIGFNEIHHQSNDTDYLFPITRLVSVHQQQQQQQQQQQPTAPPPNINLASSTNFDLQDNSNCLQSLTLSMGSGKPSTCEQTTSTPDNSTSNNNNNNNNNTTLDVTPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESNTLPIGGGAAKRLKEAQAMESSRKRDEMIALGSSSSSSSCFQYGTSSSSTNNSSHYPNLLQQPNLNMDHHLQTQPLLSLQNQHDISHYTHHHSSSFHHPSSSYIHHSSDHSAYPNNNSHPFYGGGYLHNHPALLHGMINMGGGGGGGGGGASSLDTNNNTNTLNHFENNTSGAGYLGNAFGMGSTSNSSGAAAEEYALVKVDYDMPNSGGYGGWTGDSVQGSNAGVFSMWND | 603 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 41663069 | 41666412 | + | CePI673135_02g024450.1 | Cec02g2445 | 197498 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g2445 | 603 | Pfam | AP2 domain | 302 | 351 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | MobiDBLite | consensus disorder prediction | 110 | 130 | - | - | |
Cec02g2445 | 603 | SUPERFAMILY | DNA-binding domain | 300 | 361 | IPR016177 | GO:0003677(InterPro) | |
Cec02g2445 | 603 | PRINTS | Ethylene responsive element binding protein signature | 203 | 214 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | PRINTS | Ethylene responsive element binding protein signature | 341 | 361 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 142 | 459 | - | - | |
Cec02g2445 | 603 | Gene3D | AP2/ERF domain | 202 | 267 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | Gene3D | AP2/ERF domain | 301 | 361 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | ProSiteProfiles | AP2/ERF domain profile. | 202 | 265 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | FunFam | AP2-like ethylene-responsive transcription factor | 300 | 361 | - | - | |
Cec02g2445 | 603 | ProSiteProfiles | AP2/ERF domain profile. | 301 | 359 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | MobiDBLite | consensus disorder prediction | 148 | 188 | - | - | |
Cec02g2445 | 603 | CDD | AP2 | 201 | 267 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | SUPERFAMILY | DNA-binding domain | 201 | 267 | IPR016177 | GO:0003677(InterPro) | |
Cec02g2445 | 603 | SMART | rav1_2 | 202 | 271 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | SMART | rav1_2 | 301 | 365 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec02g2445 | 603 | MobiDBLite | consensus disorder prediction | 460 | 482 | - | - | |
Cec02g2445 | 603 | MobiDBLite | consensus disorder prediction | 405 | 425 | - | - | |
Cec02g2445 | 603 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 201 | 267 | - | - | |
Cec02g2445 | 603 | MobiDBLite | consensus disorder prediction | 466 | 482 | - | - | |
Cec02g2445 | 603 | CDD | AP2 | 300 | 361 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2445 | Cec-Chr2:41663069 | Cec11g0922 | Cec-Chr11:14235145 | 2.00E-105 | dispersed | |
Cec02g2445 | Cec-Chr2:41663069 | Cec04g1474 | Cec-Chr4:34282342 | 3.70E-91 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29154 | PF00847 | AP2 | 2.90E-09 | CL0081 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g2445 | K09285 | - | csv:101207097 | 990.334 |