Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g2456 | ATGGATTCGCCTCAGCCATCCCCACCAGAGCTTCATCTTCACAGTCTCACACCCCTCAAAGTTCTCGGAAAAGGAGCCATGGGAACCGTCTTCCTCGTCCACGACCGCCTTTCCGATGAGCCGGCTCATTTCCCCTTTGCTCTCAAAGTCGTCGAGAAATCCTCTTTCGTCTCCAAACTCGACGCCGACCGGCGAGCTCGTTGGGAGATTCAGGTTCTTTCTCGTTTGTCCTTCCCTAAACCCCACCCTTTCCTCCCCCGCATTATTGGTTTCTTCGAATCCCATGAGTTTTTGGGCTGGGCCGTTCCGTACTGTCCCGGCGGCGATCTTAACGTCTTGCGTTACCGTCAATTGGACCGGGTTTTCTCGCCGGCAGTCATTCGGTTCTATTTGGCCGAGATCGTCTGTGCGCTCGACCATCTTCATAGCATGGGCATCGTCTACCGAGATTTGAAGCCAGAGAATGTTTTGATTCAACAATCGGGTCACGTCACTCTCACGGACTTTGATTTGTCTCGTAGTTTGACACGCAGAACAGTAAAAGACGTCGTCTCGCTTGATAACTCCAACCACGAGAAGCCGCCGATCGCCGTCCGCCCAAAACACGGGCGAAAGTTGACGCGATGGATTATGACGACCTCCAATGTTAAAGGCGGGTTAAAAAAGGCTAAATCGGCTCGGGTTAGTCCTGTGAGTCGCCGGAAGCCGAGTTTCACGAATGGCGAGCGGTCAAATTCGTTCGTCGGAACGGAGGAGTATGTCTCACCGGAGGTTGTTCGAGGCGACGGTCATGAATTCGCCGTCGACTGGTGGGCCCTGGGGATTCTCACGTACGAGATGCTCTATGGGACGACGCCGTTTAAGGGGAAAAACAGGAAAGAGACGTTCCGAAACGTTTTGGTCAAAGCTCCGGAGTTGATTGGAAAGCGTTCGGATTTAACGGATTTGATCGAACGGTTGCTGGTAAAAGACCCCACGAAGCGGTTGGGGTACGTACGGGGCGCGTGCGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCAAGCGACCGCCGTTTTTACCTCCTCGTGAAGAAACGGAATGGGCGGAGAATTTAACGCTCGGTTGTGTGAGTATAACGGAATACTTTCTCAGACAGAGATCGCCACCTTCGTTTCCACCGTCGCCGTCGTCAACTCCGTCGACCTCCTTCAGTTGGCAGAATAACATGTCATTGACGGAGTTCTGA | 1251 | 52.76 | MDSPQPSPPELHLHSLTPLKVLGKGAMGTVFLVHDRLSDEPAHFPFALKVVEKSSFVSKLDADRRARWEIQVLSRLSFPKPHPFLPRIIGFFESHEFLGWAVPYCPGGDLNVLRYRQLDRVFSPAVIRFYLAEIVCALDHLHSMGIVYRDLKPENVLIQQSGHVTLTDFDLSRSLTRRTVKDVVSLDNSNHEKPPIAVRPKHGRKLTRWIMTTSNVKGGLKKAKSARVSPVSRRKPSFTNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKAPELIGKRSDLTDLIERLLVKDPTKRLGYVRGACEIKEHAFFNGVKWDLLTEVKRPPFLPPREETEWAENLTLGCVSITEYFLRQRSPPSFPPSPSSTPSTSFSWQNNMSLTEF | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 41702933 | 41704183 | + | CePI673135_02g024560.1 | Cec02g2456 | 197509 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g2456 | 416 | MobiDBLite | consensus disorder prediction | 224 | 243 | - | - | |
Cec02g2456 | 416 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g2456 | 416 | ProSiteProfiles | Protein kinase domain profile. | 16 | 344 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2456 | 416 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 108 | - | - | |
Cec02g2456 | 416 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 411 | IPR011009 | - | |
Cec02g2456 | 416 | PANTHER | FLIPPASE KINASE 1-RELATED | 10 | 365 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cec02g2456 | 416 | SMART | serkin_6 | 16 | 344 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2456 | 416 | Gene3D | Transferase(Phosphotransferase) domain 1 | 241 | 363 | - | - | |
Cec02g2456 | 416 | FunFam | Serine/threonine-protein kinase OXI1 | 242 | 363 | - | - | |
Cec02g2456 | 416 | FunFam | Serine/threonine-protein kinase UCNL | 16 | 108 | - | - | |
Cec02g2456 | 416 | Pfam | Protein kinase domain | 19 | 182 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2456 | 416 | Pfam | Protein kinase domain | 239 | 344 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2456 | 416 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 177 | - | - | |
Cec02g2456 | 416 | FunFam | Serine/threonine-protein kinase OXI1 | 109 | 177 | - | - | |
Cec02g2456 | 416 | MobiDBLite | consensus disorder prediction | 389 | 416 | - | - | |
Cec02g2456 | 416 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 49 | IPR017441 | GO:0005524(InterPro) | |
Cec02g2456 | 416 | MobiDBLite | consensus disorder prediction | 399 | 416 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2456 | Cec-Chr2:41702933 | Cec05g0014 | Cec-Chr5:154017 | 1.90E-62 | dispersed | |
Cec09g0841 | Cec-Chr9:7884230 | Cec02g2456 | Cec-Chr2:41702933 | 4.60E-75 | transposed | |
Cec10g1395 | Cec-Chr10:28259783 | Cec02g2456 | Cec-Chr2:41702933 | 1.00E-58 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71790 | PF00069 | Pkinase | 6.50E-31 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g2456 | - | - | - | 0.0 |