Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2456 ATGGATTCGCCTCAGCCATCCCCACCAGAGCTTCATCTTCACAGTCTCACACCCCTCAAAGTTCTCGGAAAAGGAGCCATGGGAACCGTCTTCCTCGTCCACGACCGCCTTTCCGATGAGCCGGCTCATTTCCCCTTTGCTCTCAAAGTCGTCGAGAAATCCTCTTTCGTCTCCAAACTCGACGCCGACCGGCGAGCTCGTTGGGAGATTCAGGTTCTTTCTCGTTTGTCCTTCCCTAAACCCCACCCTTTCCTCCCCCGCATTATTGGTTTCTTCGAATCCCATGAGTTTTTGGGCTGGGCCGTTCCGTACTGTCCCGGCGGCGATCTTAACGTCTTGCGTTACCGTCAATTGGACCGGGTTTTCTCGCCGGCAGTCATTCGGTTCTATTTGGCCGAGATCGTCTGTGCGCTCGACCATCTTCATAGCATGGGCATCGTCTACCGAGATTTGAAGCCAGAGAATGTTTTGATTCAACAATCGGGTCACGTCACTCTCACGGACTTTGATTTGTCTCGTAGTTTGACACGCAGAACAGTAAAAGACGTCGTCTCGCTTGATAACTCCAACCACGAGAAGCCGCCGATCGCCGTCCGCCCAAAACACGGGCGAAAGTTGACGCGATGGATTATGACGACCTCCAATGTTAAAGGCGGGTTAAAAAAGGCTAAATCGGCTCGGGTTAGTCCTGTGAGTCGCCGGAAGCCGAGTTTCACGAATGGCGAGCGGTCAAATTCGTTCGTCGGAACGGAGGAGTATGTCTCACCGGAGGTTGTTCGAGGCGACGGTCATGAATTCGCCGTCGACTGGTGGGCCCTGGGGATTCTCACGTACGAGATGCTCTATGGGACGACGCCGTTTAAGGGGAAAAACAGGAAAGAGACGTTCCGAAACGTTTTGGTCAAAGCTCCGGAGTTGATTGGAAAGCGTTCGGATTTAACGGATTTGATCGAACGGTTGCTGGTAAAAGACCCCACGAAGCGGTTGGGGTACGTACGGGGCGCGTGCGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCAAGCGACCGCCGTTTTTACCTCCTCGTGAAGAAACGGAATGGGCGGAGAATTTAACGCTCGGTTGTGTGAGTATAACGGAATACTTTCTCAGACAGAGATCGCCACCTTCGTTTCCACCGTCGCCGTCGTCAACTCCGTCGACCTCCTTCAGTTGGCAGAATAACATGTCATTGACGGAGTTCTGA 1251 52.76 MDSPQPSPPELHLHSLTPLKVLGKGAMGTVFLVHDRLSDEPAHFPFALKVVEKSSFVSKLDADRRARWEIQVLSRLSFPKPHPFLPRIIGFFESHEFLGWAVPYCPGGDLNVLRYRQLDRVFSPAVIRFYLAEIVCALDHLHSMGIVYRDLKPENVLIQQSGHVTLTDFDLSRSLTRRTVKDVVSLDNSNHEKPPIAVRPKHGRKLTRWIMTTSNVKGGLKKAKSARVSPVSRRKPSFTNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKAPELIGKRSDLTDLIERLLVKDPTKRLGYVRGACEIKEHAFFNGVKWDLLTEVKRPPFLPPREETEWAENLTLGCVSITEYFLRQRSPPSFPPSPSSTPSTSFSWQNNMSLTEF 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 41702933 41704183 + CePI673135_02g024560.1 Cec02g2456 197509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2456 416 MobiDBLite consensus disorder prediction 224 243 - -
Cec02g2456 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g2456 416 ProSiteProfiles Protein kinase domain profile. 16 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2456 416 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
Cec02g2456 416 SUPERFAMILY Protein kinase-like (PK-like) 17 411 IPR011009 -
Cec02g2456 416 PANTHER FLIPPASE KINASE 1-RELATED 10 365 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec02g2456 416 SMART serkin_6 16 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2456 416 Gene3D Transferase(Phosphotransferase) domain 1 241 363 - -
Cec02g2456 416 FunFam Serine/threonine-protein kinase OXI1 242 363 - -
Cec02g2456 416 FunFam Serine/threonine-protein kinase UCNL 16 108 - -
Cec02g2456 416 Pfam Protein kinase domain 19 182 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2456 416 Pfam Protein kinase domain 239 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g2456 416 Gene3D Transferase(Phosphotransferase) domain 1 109 177 - -
Cec02g2456 416 FunFam Serine/threonine-protein kinase OXI1 109 177 - -
Cec02g2456 416 MobiDBLite consensus disorder prediction 389 416 - -
Cec02g2456 416 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524(InterPro)
Cec02g2456 416 MobiDBLite consensus disorder prediction 399 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2456 Cec-Chr2:41702933 Cec05g0014 Cec-Chr5:154017 1.90E-62 dispersed
Cec09g0841 Cec-Chr9:7884230 Cec02g2456 Cec-Chr2:41702933 4.60E-75 transposed
Cec10g1395 Cec-Chr10:28259783 Cec02g2456 Cec-Chr2:41702933 1.00E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71790 PF00069 Pkinase 6.50E-31 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2456 - - - 0.0