Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2495 ATGGGTTCCCCTAAATTAACAGCCTTAGTTGCGGTGTTAGCTTTGATGCTGGGATCCTCTCAGGCTCAGCTTAACCCTTTCTTCTACACCTTCACATGCCCTCAGCTGCCTTTTGTTGTTCTAAATGTGGTCTCACAAGCTCTCCAAACCGATGATCGAGCAGCTGCCAAGCTCATTCGTCTTCACTTTCACGACTGCTTCGTCAATGGGTGTGACGGGTCTGTGCTACTAGAAGACGTACCGGGAGTCATTGATAGTGAATTAAACGCACCTCCCAACAATGGAATCCAAGGGCTGGACATTGTGGACAACATCAAAGCAGCAGTTGAAAGCGCTTGCCCGGGCGTTGTCTCCTGTGCTGACATCTTAGCGCTCTCAGCTCAAGTTTCTGTCGTATTGTCTGGAGGGCCAGCATGGGTTGTTCCACTGGGACGAAAAGACAGCAGAAGAGCAAACAGAACTGCAGCCGCAAATCTTCCAAGTCCATTCGAAACTCTAGACGTGTTGAAAGCCAAATTTGCGGCACTTGGGCTGGGTTCTACAGATTTGGTGACTCTATCAGGAGCCCACACATTCGGTCGATCTAGATGCCTCTTTTTCACAGGACGGTTCGACAATTTCAATAACACTGGTCTGCCAGACCCTACTCTGGATGCTGCTTACAGGGAGCAGCTCCGTCAAGCTTGTACCACTCCTGGAACGCGAGTAAGCTTTGACCCGATCACACCAGACACCTTTGATAAAAACTACTACATCAATCTTCAAAATCACAAAGGGCTTCTCCAAAGTGATCAAGAGCTTTTCTCAACTCCCGGGGCTGATACAACTGCCATTGTCAATACATTTGCCGCTAGCCAGCTTTTGTTCTTCATTCAATTTGGGAATTCCATGATCAAAATGGGAAATCTGAGCCCTCCACCTGGTATCCCATCTGAAGTCAGATTGAACTGTAGAAAGGTCAACCCACCCACTGTTCTACATGATGTTATCTAA 993 47.83 MGSPKLTALVAVLALMLGSSQAQLNPFFYTFTCPQLPFVVLNVVSQALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDVPGVIDSELNAPPNNGIQGLDIVDNIKAAVESACPGVVSCADILALSAQVSVVLSGGPAWVVPLGRKDSRRANRTAAANLPSPFETLDVLKAKFAALGLGSTDLVTLSGAHTFGRSRCLFFTGRFDNFNNTGLPDPTLDAAYREQLRQACTTPGTRVSFDPITPDTFDKNYYINLQNHKGLLQSDQELFSTPGADTTAIVNTFAASQLLFFIQFGNSMIKMGNLSPPPGIPSEVRLNCRKVNPPTVLHDVI 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42028603 42029855 + CePI673135_02g024950.1 Cec02g2495 197548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2495 330 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 ProSiteProfiles Plant heme peroxidase family profile. 23 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 FunFam Peroxidase 27 172 - -
Cec02g2495 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cec02g2495 330 Gene3D - 28 321 - -
Cec02g2495 330 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 Pfam Peroxidase 41 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 Gene3D Peroxidase, domain 2 160 300 - -
Cec02g2495 330 PANTHER PEROXIDASE 72-RELATED 11 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2495 330 FunFam Peroxidase 160 300 - -
Cec02g2495 330 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cec02g2495 330 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2495 Cec-Chr2:42028603 Cec02g2499 Cec-Chr2:42060433 6.50E-114 dispersed
Cec02g2494 Cec-Chr2:42020596 Cec02g2495 Cec-Chr2:42028603 8.20E-120 tandem
Cec02g2495 Cec-Chr2:42028603 Cec02g2496 Cec-Chr2:42032865 6.50E-138 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2495 K00430 - csv:101211752 600.127