Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2497 ATGGGTTCTTTCAGTTTCTTGCTTTTGTTTGTGGGTGTTTTGTTTGGAAGGTCTTATGCCCAACTCACCGAGAACTTCTACGACCAAACTTGCCCTCGTCTCCCTAACATTGTCCGCCGTGAGGTCAAGAGAGCTATCGAAACCGACATCCGTGCCGGGGCGAAACTCATTCGCTTCCATTTCCACGATTGCTTCGTCCAAGGTTGCGACGGCTCTGTTTTGCTAGAGGATGCTCCTGGCATAGACAGTGAGCTGAATGGACTTGGAAATTTAGGAATCCAAGGATTGGAGATTGTCGATGCTATCAAAGCCGCTGTGGAGAGGGAATGTCCCGGCATAGTCTCATGCGCCGACATCCTAGCCCAAGCCTCTAAAGACTCTGTGGACGTGCAAGGAGGGCCCAGTTGGAGAGTTTTATACGGAAGAAGAGATAGCAGAACAGCTAATAGATCAGGGGCTGATGAACTCCCAAGTCCCTTCGAAAATCTTGACCAACTCAAAAGAAAGTTCCAAGTCGTTGGGTTGAATTCCACTGATCTTGTTGCTCTATCAGGAGCACATACGTTTGGTCGGTCAAGATGCATGTTCTTCAGTGACCGTTTGTCCAACTTCAGTGGGAGTGGGCAACCAGATCCTACCCTAGATCCAACCTACAGGCAAGAACTGGAAAGAGCTTGTACAAGTCCAGAAACACGAGTGAATTTCGATCCAACAACACCGGACACATTTGACAAAAATTACTACACCAATCTTCAAGCCAATCGAGGTCTTCTTAAGAGCGACCAAATTCTGTTCTCTACTGGAGGGGCCGACACAATTGCCATTGTCAACCTTCTTGGATCGCGAGAAGGCACCTTCTTTAGACAATTTCGGCTCTCCATGATTAAGATGGGAAATATTAGACCCTTAACCGGAACCCAAGGGGAAATCAGAAGAAACTGCAGGAGGGTCAATGACTTGGGAGGTGAAGCAGGACATGATGTTATGTAA 990 47.58 MGSFSFLLLFVGVLFGRSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDAPGIDSELNGLGNLGIQGLEIVDAIKAAVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRTANRSGADELPSPFENLDQLKRKFQVVGLNSTDLVALSGAHTFGRSRCMFFSDRLSNFSGSGQPDPTLDPTYRQELERACTSPETRVNFDPTTPDTFDKNYYTNLQANRGLLKSDQILFSTGGADTIAIVNLLGSREGTFFRQFRLSMIKMGNIRPLTGTQGEIRRNCRRVNDLGGEAGHDVM 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42040470 42041644 + CePI673135_02g024970.1 Cec02g2497 197550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2497 329 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PANTHER PEROXIDASE 72-RELATED 10 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 Pfam Peroxidase 38 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Cec02g2497 329 CDD secretory_peroxidase 21 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec02g2497 329 Gene3D Peroxidase, domain 2 157 297 - -
Cec02g2497 329 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 FunFam Peroxidase 157 297 - -
Cec02g2497 329 Gene3D - 26 318 - -
Cec02g2497 329 SUPERFAMILY Heme-dependent peroxidases 21 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2497 329 FunFam Peroxidase 25 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2497 Cec-Chr2:42040470 Cec02g2499 Cec-Chr2:42060433 1.10E-142 dispersed
Cec02g2496 Cec-Chr2:42032865 Cec02g2497 Cec-Chr2:42040470 5.90E-107 tandem
Cec02g2497 Cec-Chr2:42040470 Cec02g2498 Cec-Chr2:42047292 1.40E-177 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2497 K00430 - csv:101212230 492.656