Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2499 ATGGCCTCCGCCAATGCCGCAGCCTCCTTTTTCTTTCTGGCTCTTCTCTTCGGAAGCTCTTTAGCTCAACTCTCCGAGACCTTTTACGATCAAACCTGCCCTCGCCTCCCCAACATTGTCCGTGCCTCCGTCAAAAGAGCTATCGAAACCGACATCCGTGCCGGTGCTAAACTTATCCGCCTCCATTTCCATGACTGCTTCGTCAATGGATGTGATGGCTCTGTCTTGCTAGAGGATGCTCCTGGCATAGTCAGTGAGCTCAACTCACCTGGAAATCAGGGAATCCAAGGCCTCGAGATTGTTGACGCCATTAAAGCAGACGTTGAGAGGGAATGCCCCGGCATCGTCTCCTGTGCCGACATTCTAGCTCAAGCTTCCAAGGACTCTGTCGATGTGCAAGGAGGGCCTAGTTGGAGAGTGTTATACGGAAGACGAGACAGTAGAATAGCGAACAAAACAGGGGCGGATAGTGGGTTGGCCAGTCCCTTCGAAACTCTAGACCAACTCAAAGCTAAATTTGCTGCTGTTGGCCTTGGTACCACTGATCTCGTCGCTTTATCAGGAGCGCATACGTTTGGTCGATCGAGATGCAGATTCTTCAGCCACCGATTTGCGAATTTCAACAACACTGGAAGGCCAGACCCATCACTGGATGCTAACTACAGAGGATTCCTTGAAGGGGTTTGCTCAGCAGGTCCAGACACAAGAGCCAATTTCGACCCAGTAACACCCGACGTGTTCGACAAAAACTACTACACAAATCTTCAAGTTGGGAAGGGGCTTCTGCAAAGTGACCAAGAGCTGTTCTCTACTCCAGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCAGCCAGAGAAGGCACCTTCTTCAAGGAGTTCCGGCAGTCCATGATCAACATGGGGAACATCAAGCCTTTGACTGGCAGCCGTGGGGAAATTAGAAGAAACTGCAGGAGGGTTAACTCTGGGTTGGGTGGAGAAGGGCATGATGTTATGTAA 1002 51.1 MASANAAASFFFLALLFGSSLAQLSETFYDQTCPRLPNIVRASVKRAIETDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDQLKAKFAAVGLGTTDLVALSGAHTFGRSRCRFFSHRFANFNNTGRPDPSLDANYRGFLEGVCSAGPDTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRQSMINMGNIKPLTGSRGEIRRNCRRVNSGLGGEGHDVM 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42060433 42061701 + CePI673135_02g024990.1 Cec02g2499 197552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2499 333 PANTHER PEROXIDASE 72-RELATED 13 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 Gene3D - 28 322 - -
Cec02g2499 333 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 FunFam Peroxidase 27 173 - -
Cec02g2499 333 FunFam Peroxidase 160 301 - -
Cec02g2499 333 CDD secretory_peroxidase 23 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec02g2499 333 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cec02g2499 333 ProSiteProfiles Plant heme peroxidase family profile. 23 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 Gene3D Peroxidase, domain 2 160 301 - -
Cec02g2499 333 Pfam Peroxidase 40 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2499 333 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2493 Cec-Chr2:42016362 Cec02g2499 Cec-Chr2:42060433 2.00E-110 dispersed
Cec02g2494 Cec-Chr2:42020596 Cec02g2499 Cec-Chr2:42060433 4.50E-126 dispersed
Cec02g2495 Cec-Chr2:42028603 Cec02g2499 Cec-Chr2:42060433 6.50E-114 dispersed
Cec02g2496 Cec-Chr2:42032865 Cec02g2499 Cec-Chr2:42060433 7.00E-108 dispersed
Cec02g2497 Cec-Chr2:42040470 Cec02g2499 Cec-Chr2:42060433 1.10E-142 dispersed
Cec02g2499 Cec-Chr2:42060433 Cec02g2501 Cec-Chr2:42079444 1.10E-103 dispersed
Cec09g0473 Cec-Chr9:4030683 Cec02g2499 Cec-Chr2:42060433 1.20E-62 dispersed
Cec02g2498 Cec-Chr2:42047292 Cec02g2499 Cec-Chr2:42060433 7.90E-136 tandem
Cec02g2499 Cec-Chr2:42060433 Cec02g2500 Cec-Chr2:42069673 1.20E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2499 K00430 - csv:101217781 592.808