Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g2500 ATGGCTTCCTTCTTCAAAGTTGTTTCTTTCCTTTTGTTTGTGGGGTTGATGGTTGAAGCTTCTAAAGCTCAGCTCTGTCCCACGTTTTACGACGACTCATGCCCCGACGTATCCAACATTGTGCGCAGTGTAGTGCAGCAAGCTTTGGAAACCGACGACCGTGCTGGTGCCAGACTCATTCGCCTCCATTTCCACGACTGCTTTGTTGATGGGTGCGATGGGTCAGTTTTACTAGTGAACCAAACCGGCGTAGTGAGTGAGCTTGGCGCTCCTGGAAATGCCAATATTACAGGATTTAACATTGTTGATGACATTAAAGCCGCACTTGAGGAGGCTTGTCCTGGTGTTGTTTCTTGTGCCGACATTTTAGCCATAGCTTCTGTGGAAGCAGTTTCCTTGGCAGGAGGACCGTGTTGGGAGGTTCAACTGGGAAGAAGGGACAGCAGAACGGCTAACTTACAAGGCGCAATCGATGGGCTTCCAAGTCCCTTCGAAAATGTTACACAACTTAAACGCAAGTTTGGTAGAGTGGGTCTTGATTCTACCGATCTTGTTGCCTTATCTGGGGCCCACACATTCGGGAGATCAAGATGCCGATTTTTCGACGGACGTTTGAACGTTTCAAATCCAGACGCCACGCTGGACGCCACGTACGCACAGCAGCTCCGTGAGGCTTGCAGTGGGAGCAGAGACACGTTTGTAAACCTGGACCCCACCACTCCCGACGACTTCGACAACAACTACTACACAAACCTTCAGTCCAACTCCGGTCTTCTCACCAGCGACCAAGTCCTCTTCTCCACTCCCGGCGCCGACACCGTGGACACCGTCAACATGTTCGCCGGCAGCCAGCAGCAGTTCTTCGACAGCTTCGGCCAGTCCATGATCAACATGGGAAATATCAGCCCTTTAACCGGTGACCAGGGAGAAATTAGGTCCAATTGCCGAAGGCTCAACTGA 960 51.35 MASFFKVVSFLLFVGLMVEASKAQLCPTFYDDSCPDVSNIVRSVVQQALETDDRAGARLIRLHFHDCFVDGCDGSVLLVNQTGVVSELGAPGNANITGFNIVDDIKAALEEACPGVVSCADILAIASVEAVSLAGGPCWEVQLGRRDSRTANLQGAIDGLPSPFENVTQLKRKFGRVGLDSTDLVALSGAHTFGRSRCRFFDGRLNVSNPDATLDATYAQQLREACSGSRDTFVNLDPTTPDDFDNNYYTNLQSNSGLLTSDQVLFSTPGADTVDTVNMFAGSQQQFFDSFGQSMINMGNISPLTGDQGEIRSNCRRLN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42069673 42071810 + CePI673135_02g025000.1 Cec02g2500 197553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g2500 319 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 Gene3D Peroxidase, domain 2 161 298 - -
Cec02g2500 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cec02g2500 319 Pfam Peroxidase 41 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PANTHER PEROXIDASE 72-RELATED 14 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 FunFam Peroxidase 161 298 - -
Cec02g2500 319 FunFam Peroxidase 28 177 - -
Cec02g2500 319 ProSiteProfiles Plant heme peroxidase family profile. 24 319 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 CDD secretory_peroxidase 24 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec02g2500 319 SUPERFAMILY Heme-dependent peroxidases 24 319 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 Gene3D - 29 319 - -
Cec02g2500 319 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g2500 319 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2498 Cec-Chr2:42047292 Cec02g2500 Cec-Chr2:42069673 1.70E-106 dispersed
Cec02g2500 Cec-Chr2:42069673 Cec11g0607 Cec-Chr11:6671703 4.90E-74 dispersed
Cec02g2499 Cec-Chr2:42060433 Cec02g2500 Cec-Chr2:42069673 1.20E-107 tandem
Cec02g2500 Cec-Chr2:42069673 Cec02g2501 Cec-Chr2:42079444 7.40E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g2500 K00430 - csv:101212717 530.791