Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g2536 | ATGTATGACTCAGTATGTGTAATTGGAGGCCTAACAAAGTTCTGCTGGCTTCACTTGAAGAGGGATCTTCAAACTAATGCAGAGGTCAGGGATTTGTCGAACTTCCCAGAGGAATGCACAGAACACAGTCTTGTATGCCCCTTTCCCGTTCCAGCTCATAAAAGGAGTTTTCTCTTTGGACTTCTTGGAATAGAACATTACAATAGGGAGACTTCTTTATGCTATGTTGTTGATTTGAGCATGATGATATATGTGCAAAGTAAGAATGAGGATCCTCTCGCATTTGTCAACCTACTACCTTTCAGGATGCAAAGAGGGTTAGAATATTTTACATCCATGAGAAGATCAGGTGTAAACCAACCAAAAGTTAAGCGTCTTGTTGGAAAATACGAAATTGGTCGAACAATTGGTGAGGGTACATTTGCGAAGGTGAAAATTGCCAAAAATTCAGAGACTGGGGATCATGTAGCAATAAAGATTCTCGACAAAGAGAAAGTTCTGAAGCACAAGATGGCTGAACAGATCAAGCGGGAAATTGCCACAATGAAACTAATAAAGCATCCACATGTCGTCCAATTATTTGAGGTGATGGGGAGCAAAACCAAGATATTTATTGTTTTGGAATTTGTTACTGGAGGAGAACTTTTTGATAAAATTGTAAATCATGGACGGATGAGTGAAAATGAGGCACGGAGATATTTCCAGCAACTTATAAATGCTGTTGATTATTGTCATAGCAGGGGTGTTTACCACAGGGATCTTAAGCCAGAAAATCTATTGTTAGATGCCTACGGGAATCTTAAAGTGTCTGATTTTGGATTAAGTGCACTGTCACAACAAGTTAAGGATGATGGCCTGCTTCACACTACTTGTGGAACTCCAAACTATGTTGCTCCCGAGGTCCTTAAGGATAGAGGCTACGATGGTGCAACTGCAGACTTATGGTCTTGTGGAGTTATACTCTTTGTACTGCTTGCAGGTTACTTGCCTTTTGATGATTCTAATCTCATCAACCTTTATAAAAAGATCTCGGCTGCTGAATTTACTTGTCCTCCGTGGCTTTCTTTAGATGCCATGAAATTGATAGCTCGAATTTTGGATCCCAACCCAATGACTCGCATCACTATACCTGAAATTTTGGAAGATGAATGGTTTAAGAAAGATTATAAGCCCCCTGTTTTTGAGGAGCCTAAGATTGCAAACTTGGATGATGTAGAAGCTGTCTTCAAAGATTCAGAAGAGCACCATGTGACAGAGAAGAAGGAAGAACACCCAGCAGCTATGAATGCCTTCGAGTTAATTTCAATGTCGAAAGGGCTCAACCTGGCAAATTTGTTTGGTACAGAACAGGAGTTCAAGAGAGAAACAAGGTTCACCTCTAAATGCTCAGCTAATGAAATTGTAAATAAGATCGAAGAAGCTGCGAAACCTCTTGGTTTTGATGTACAAAAGAAAAATTACAAGATGAGGCTTGAAAATGTGAAAGCCGGTCGGAAGGGAAACCTTAATGTTGCCACAGAGATTCTGCAAGTTGCACCTTCTGTCCATGTGGTGGAGATGAGAAAAGCAAAGGGGGACACTTTAGAGTTTCACAAGTTCTACAAAAACCTCTCCACCTCCCTGGAGGATGTTGTTTGGAAGACGGAGGAAGACATGCAGGAAACAAATTTGGAAACTTTTGTTCTGCAGTCAACAAAGAAAGAAGATGAAATATAG | 1716 | 40.38 | MYDSVCVIGGLTKFCWLHLKRDLQTNAEVRDLSNFPEECTEHSLVCPFPVPAHKRSFLFGLLGIEHYNRETSLCYVVDLSMMIYVQSKNEDPLAFVNLLPFRMQRGLEYFTSMRRSGVNQPKVKRLVGKYEIGRTIGEGTFAKVKIAKNSETGDHVAIKILDKEKVLKHKMAEQIKREIATMKLIKHPHVVQLFEVMGSKTKIFIVLEFVTGGELFDKIVNHGRMSENEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVKDDGLLHTTCGTPNYVAPEVLKDRGYDGATADLWSCGVILFVLLAGYLPFDDSNLINLYKKISAAEFTCPPWLSLDAMKLIARILDPNPMTRITIPEILEDEWFKKDYKPPVFEEPKIANLDDVEAVFKDSEEHHVTEKKEEHPAAMNAFELISMSKGLNLANLFGTEQEFKRETRFTSKCSANEIVNKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEILQVAPSVHVVEMRKAKGDTLEFHKFYKNLSTSLEDVVWKTEEDMQETNLETFVLQSTKKEDEI | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 42398226 | 42405199 | + | CePI673135_02g025360.1 | Cec02g2536 | 197589 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g2536 | 571 | Gene3D | Kinase associated domain 1, KA1 | 422 | 547 | - | - | |
Cec02g2536 | 571 | CDD | STKc_SnRK3 | 129 | 384 | - | - | |
Cec02g2536 | 571 | ProSiteProfiles | NAF domain profile. | 423 | 447 | IPR018451 | GO:0007165(InterPro) | |
Cec02g2536 | 571 | FunFam | Non-specific serine/threonine protein kinase | 121 | 209 | - | - | |
Cec02g2536 | 571 | Gene3D | Transferase(Phosphotransferase) domain 1 | 210 | 392 | - | - | |
Cec02g2536 | 571 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 249 | 261 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g2536 | 571 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 120 | 535 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cec02g2536 | 571 | Gene3D | Phosphorylase Kinase; domain 1 | 119 | 209 | - | - | |
Cec02g2536 | 571 | ProSitePatterns | Protein kinases ATP-binding region signature. | 136 | 159 | IPR017441 | GO:0005524(InterPro) | |
Cec02g2536 | 571 | Pfam | Protein kinase domain | 130 | 385 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2536 | 571 | CDD | CIPK_C | 429 | 543 | - | - | |
Cec02g2536 | 571 | SUPERFAMILY | Protein kinase-like (PK-like) | 126 | 412 | IPR011009 | - | |
Cec02g2536 | 571 | ProSiteProfiles | Protein kinase domain profile. | 130 | 385 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2536 | 571 | FunFam | Non-specific serine/threonine protein kinase | 422 | 547 | - | - | |
Cec02g2536 | 571 | FunFam | Non-specific serine/threonine protein kinase | 123 | 426 | - | - | |
Cec02g2536 | 571 | SMART | serkin_6 | 130 | 385 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2536 | 571 | Pfam | NAF domain | 425 | 484 | IPR004041 | GO:0007165(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2536 | Cec-Chr2:42398226 | Cec03g0761 | Cec-Chr3:8350328 | 2.80E-181 | dispersed | |
Cec10g1822 | Cec-Chr10:33020566 | Cec02g2536 | Cec-Chr2:42398226 | 5.80E-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71796 | PF00069 | Pkinase | 2.00E-72 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g2536 | - | - | - | 0.0 |