Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g2538 | ATGATGATTCTACAGACCAAAAATATAGAAGAGAAGAGAAGAGAAGAGAAGAGTTTGTGGGGGAACAAATTTGCTGCCATAGGGCTCGACTCTCCTCTTTCATCTCTATTCTTCGACCTCTTCTGCGTACGGAGCTGCTCAATTCCGTCTCTGGTCTCCAGCTCTTTGGCTACTCCCTTCAATTCCCAATTCAGGGTCTTCAGGGAAGGGAGATTACGCGTCCAAGGGAAGACTATGGCTGTAACAGCCCCAGGGCAGCTCAACGTTAACGAGTCTCCTTCGTGGGGATCTAGAAGTGTCGACTGCTTTGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTTTACATGGCCAGAGAATTAAAAACAGGTGAAATTGTTGCACTGAAGAAAATACGAATGGACAATGAGAGGGAGGGGTTCCCTATTACTGCCATACGAGAAATCAAAATTTTAAAGAAGCTTCATCATGAAAATGTAATCAAGTTGAAAGAGATCGTGACATCTCCAGGTCCTGAGAAGGATGAACAAGGGAAGCCAGATGGTAATAAGTACAAAGGTGGAATCTACATGGTTTTTGAGTACATGGACCATGATTTGACTGGTCTTGCTGATCGTCCAGGGATGAGATTTTCAGTTCCTCAAATCAAGTGTTACATGAGACAGCTTCTCACCGGGCTTCACTATTGTCATGTAAATCAAGTACTCCATAGAGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGATCATTTTCTAATGATCATAATGCAAATTTAACAAATCGTGTCATTACCTTATGGTACAGACCTCCTGAATTGCTGCTTGGGTCGACCAAATATGGTCCAGCTGTGGATATGTGGTCTGTTGGTTGTATCTTTGCAGAACTTCTACATGGGAAGCCAATATTCCCTGGGAAGGATGAGCCGGAGCAATTAAATAAGATCTTTGAGCTGTGTGGTGCTCCGGATGAAGTCAATTGGCCTGGAGTTTCTAAAATCCCTTGGTACAATAATTTCAAGCCCACAAGGCCGATGAAGAGACGTCTTAGAGAAGTTTTCCGGCATTTTGATCGTCATGCTCTAGAACTGTTGGAGAAGATGCTTACGCTCGATCCTTCTCAGAGGATATCTGCCAAGGATGCCCTAGATGCGGAGTATTTTTGGACGGATCCATTACCATGTGATCCTAAAAGTTTGCCTAAGTATGAATCATCACACGAGTTCCAGACAAAGAAGAAGCGCCAACAGCAACGACAACATGAAGAAACTGCAAAGCGACAGAAGTTGCAACATCCACAGCATGCACGCCTTCCACCTATTCAGCAATCGGGGCAAGCACATGCACAGATGCGACCAGTGCCTAACCAACCAATTCATGGGTCTCAACAACCAGTTGCTGCAGGGCCTAGCCATCATTTTGGAAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCCGGTGGAAATCCCCCTTCTGGATACAACCACTCAAGTCGTGGTGGCGGTCAAGGTGGTTATGGTAACACACAATATGCTCAAGGACGAGGTGCTGCACCCTATGGGTCTGGTAACATGTCTGGTGCTGGTCCTCGAGGTGGAGCTGGAGGCGGCGGTGGTTATGGCGTGGGAGCTCCAAATTATCCACAGAATGGTCCATATCCTGGTAGTTCCGGTACTGGCCGTGGCTCCAATGTGATGGGTGGAAATCGCAACCAACAATATGGATGGCAACAACAATGA | 1785 | 46.16 | MMILQTKNIEEKRREEKSLWGNKFAAIGLDSPLSSLFFDLFCVRSCSIPSLVSSSLATPFNSQFRVFREGRLRVQGKTMAVTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMARELKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPQHARLPPIQQSGQAHAQMRPVPNQPIHGSQQPVAAGPSHHFGKPRGPPGPGRYPGGNPPSGYNHSSRGGGQGGYGNTQYAQGRGAAPYGSGNMSGAGPRGGAGGGGGYGVGAPNYPQNGPYPGSSGTGRGSNVMGGNRNQQYGWQQQ | 594 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 42410258 | 42417442 | - | CePI673135_02g025380.1 | Cec02g2538 | 197591 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g2538 | 594 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 237 | 249 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g2538 | 594 | MobiDBLite | consensus disorder prediction | 506 | 525 | - | - | |
Cec02g2538 | 594 | ProSitePatterns | Protein kinases ATP-binding region signature. | 109 | 132 | IPR017441 | GO:0005524(InterPro) | |
Cec02g2538 | 594 | FunFam | Cyclin-dependent kinase C-2 | 90 | 199 | - | - | |
Cec02g2538 | 594 | Pfam | Protein kinase domain | 103 | 402 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2538 | 594 | ProSiteProfiles | Protein kinase domain profile. | 103 | 402 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g2538 | 594 | CDD | STKc_CDK9_like | 103 | 402 | - | - | |
Cec02g2538 | 594 | MobiDBLite | consensus disorder prediction | 451 | 478 | - | - | |
Cec02g2538 | 594 | FunFam | Cyclin-dependent kinase C-2 | 200 | 442 | - | - | |
Cec02g2538 | 594 | MobiDBLite | consensus disorder prediction | 413 | 594 | - | - | |
Cec02g2538 | 594 | Gene3D | Phosphorylase Kinase; domain 1 | 90 | 199 | - | - | |
Cec02g2538 | 594 | MobiDBLite | consensus disorder prediction | 565 | 594 | - | - | |
Cec02g2538 | 594 | SUPERFAMILY | Protein kinase-like (PK-like) | 97 | 410 | IPR011009 | - | |
Cec02g2538 | 594 | Gene3D | Transferase(Phosphotransferase) domain 1 | 200 | 442 | - | - | |
Cec02g2538 | 594 | MobiDBLite | consensus disorder prediction | 415 | 444 | - | - | |
Cec02g2538 | 594 | PANTHER | CELL DIVISION PROTEIN KINASE | 103 | 402 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cec02g2538 | 594 | SMART | serkin_6 | 103 | 402 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2538 | Cec-Chr2:42410258 | Cec10g1422 | Cec-Chr10:28564247 | 8.10E-272 | dispersed | |
Cec02g2538 | Cec-Chr2:42410258 | Cec05g0684 | Cec-Chr5:5607655 | 3.40E-97 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71798 | PF00069 | Pkinase | 6.10E-75 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g2538 | K08819 | - | csv:101220936 | 983.015 |