Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g2546 | ATGGAGTTGGCCGTCCATTCCCCTCTTTCCTTCTCCACTTATTCATCTCACCCTCCCAATTCCTTAATCCCATCCCTACATAGAAGTAGACTCTTCAGTTTTCCGCCATTGTTATCGCCCCGTCTAAGCTTCCAGTTCCGGCCAAAGGGACGATCACTTCTTCAGCCTCTACAAGCTTCCCGTTGGCTTCTGGCACCCGTCGGCGATGGAGAGTGGAAGCATATAGGTTCGAAAGTAGAAATGCCAGATGCTTTCGAAATTGTGTCGAATGAGGTCACTGTTGGCCGCCTTCCTGATAAAGCCGACATTGTAATTCCGGCTGCTACAGTTTCTGCTCTACATGCTCGCATCAAAAACCAAGAAGACAGGCTCTTGGTCATAGATCTAGACAGCACCAATGGGACTTTCATCGATGACAAGAGACTTAACCCTGGGGTTGTTGCTGCTGTATCATCTGGCAATTGCATTACTTTTGGTGACATCCATCTGGCCATGTTTCAGGTCTCAAAGCTGAAAACTGTTGAAGCTGCTACCAAAATCCAAGAAGAATCTGAGGAGCCAATCATGAATCATCTGATCAGTCTCTTTAAGAGTATGCTTGGCCGAATAGAAGTTAGGGGAGTGGAGTTGACTCCACTCCTTGCTTTGCTTAACCGCAACCATCGAAGCCCTGTGATCCGATTCTTCTCTCTTCCTTTGGAAATGCCGACCAGTTTGGTCCCTTCTCACAGACCGGAGCTTCTCACCGTCGCCGTCGCTGTGGTTGCTGTCGGCGTTGCCACTGCCTACTATTTCTACATCACCAAGAAATCCAAACCCAAAGGTTGCTTGGACCCTAATAACTTCAAGGAATTTAAACTAGTTAAACGCACACAGGTTAGCCATAATGTAGCAAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATTTTGGGTCTGCCGATTGGGCAGCATATCAGCTGCAGAGGAAAAGATAGCGAAGGTGGAGATGTTGTGAAACCTTACACTCCAACCACTTTGGACACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCACAAGGAAGGATGTCCCACCACTTCCGTGAGATGCGTGAAGGTGATTACTTGGCTGTGAAAGGTCCAAAGGGACGATTCAAGTATGCACCTAACGAAGTTGAGGCCTATGGAATGCTTGCTGGAGGCACAGGCATAACTCCTATGTTCCAGGTTGCAAGAGCAATACTAGAAAATCCAGTGGATCACACCAATGTGCATCTTATATATGCTAATGTAACTTATGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGCGGCTAGGTTTCCCACCCGCTTTACTATCTACTATGTGCTCAATCAGCCTCCTGAAGGATGGGATGGTGGTGTTGGCTTCATAACTGAGGAAATGATACGACTACACTGTCCTGCGCCATCCCCTAATGTTCGGATTTTGAGGTGCGGGCCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAACACTATTGGCCATCCTCCCCAAATGCAGTTCCTGTTCTAA | 1551 | 47.0 | MELAVHSPLSFSTYSSHPPNSLIPSLHRSRLFSFPPLLSPRLSFQFRPKGRSLLQPLQASRWLLAPVGDGEWKHIGSKVEMPDAFEIVSNEVTVGRLPDKADIVIPAATVSALHARIKNQEDRLLVIDLDSTNGTFIDDKRLNPGVVAAVSSGNCITFGDIHLAMFQVSKLKTVEAATKIQEESEEPIMNHLISLFKSMLGRIEVRGVELTPLLALLNRNHRSPVIRFFSLPLEMPTSLVPSHRPELLTVAVAVVAVGVATAYYFYITKKSKPKGCLDPNNFKEFKLVKRTQVSHNVAKFRFSLPTPTSILGLPIGQHISCRGKDSEGGDVVKPYTPTTLDTDVGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYAPNEVEAYGMLAGGTGITPMFQVARAILENPVDHTNVHLIYANVTYEDILLKEELDSLAARFPTRFTIYYVLNQPPEGWDGGVGFITEEMIRLHCPAPSPNVRILRCGPPPMNKAMAAYLNTIGHPPQMQFLF | 516 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 42480680 | 42485934 | - | CePI673135_02g025460.1 | Cec02g2546 | 197599 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g2546 | 516 | Gene3D | - | 374 | 516 | IPR039261 | - | |
Cec02g2546 | 516 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 280 | 384 | IPR017927 | GO:0016491(InterPro) | |
Cec02g2546 | 516 | SMART | FHA_2 | 91 | 142 | IPR000253 | GO:0005515(InterPro) | |
Cec02g2546 | 516 | PRINTS | Cytochrome B5 reductase signature | 486 | 494 | - | - | |
Cec02g2546 | 516 | PRINTS | Cytochrome B5 reductase signature | 392 | 411 | - | - | |
Cec02g2546 | 516 | PRINTS | Cytochrome B5 reductase signature | 333 | 340 | - | - | |
Cec02g2546 | 516 | PRINTS | Cytochrome B5 reductase signature | 369 | 383 | - | - | |
Cec02g2546 | 516 | PRINTS | Cytochrome B5 reductase signature | 430 | 441 | - | - | |
Cec02g2546 | 516 | PRINTS | Cytochrome B5 reductase signature | 311 | 322 | - | - | |
Cec02g2546 | 516 | ProSiteProfiles | Forkhead-associated (FHA) domain profile. | 92 | 142 | IPR000253 | GO:0005515(InterPro) | |
Cec02g2546 | 516 | SUPERFAMILY | Riboflavin synthase domain-like | 276 | 386 | IPR017938 | - | |
Cec02g2546 | 516 | FunFam | NADH-cytochrome b5 reductase | 275 | 374 | - | - | |
Cec02g2546 | 516 | FunFam | Predicted protein | 70 | 172 | - | - | |
Cec02g2546 | 516 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 251 | 516 | IPR001834 | GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER) | |
Cec02g2546 | 516 | Pfam | FHA domain | 92 | 159 | IPR000253 | GO:0005515(InterPro) | |
Cec02g2546 | 516 | SUPERFAMILY | SMAD/FHA domain | 82 | 166 | IPR008984 | GO:0005515(InterPro) | |
Cec02g2546 | 516 | FunFam | NADH-cytochrome b5 reductase | 374 | 516 | - | - | |
Cec02g2546 | 516 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 372 | 511 | IPR039261 | - | |
Cec02g2546 | 516 | Gene3D | - | 74 | 172 | - | - | |
Cec02g2546 | 516 | Pfam | Oxidoreductase NAD-binding domain | 393 | 499 | IPR001433 | GO:0016491(InterPro) | |
Cec02g2546 | 516 | Pfam | Oxidoreductase FAD-binding domain | 285 | 383 | IPR008333 | - | |
Cec02g2546 | 516 | CDD | FHA | 85 | 163 | - | - | |
Cec02g2546 | 516 | CDD | cyt_b5_reduct_like | 285 | 516 | - | - | |
Cec02g2546 | 516 | Gene3D | Translation factors | 273 | 373 | - | - | |
Cec02g2546 | 516 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 430 | 441 | IPR001709 | GO:0016491(InterPro) | |
Cec02g2546 | 516 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 392 | 411 | IPR001709 | GO:0016491(InterPro) | |
Cec02g2546 | 516 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 486 | 494 | IPR001709 | GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g2546 | Cec-Chr2:42480680 | Cec04g0619 | Cec-Chr4:24760236 | 1.80E-118 | dispersed | |
Cec02g2546 | Cec-Chr2:42480680 | Cec11g1604 | Cec-Chr11:30327135 | 5.00E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g2546 | K00326 | - | csv:101219272 | 506.138 |