Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec02g2562 | ATGAAGCAATGGAGAGGCTTAAATTCAGAATCTCTTGCAACCTTATGGGTATTGTGCACAGCTCTAGCTCTAGCTCCAGCTCCATTTGTTGGATCGGTCTCATCTCCAAAGCACCAATTTCGTGGAATTTCTCCCCAAGATGAGATGTATTACAAGTCGTCGGACATGATCAAATGTAGAGACGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCTGCATGCCCGAATGGGAAGTTCTATTGTCGAAATGCGGGGCACGTTCCACTTTTATTGTTTTCTTCAAGGGTGAACGACGATATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAACTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTTCAACCTTTGAAGAAGGTGTTAAAATTAGAAAACAAGAAGTCGAACAGGCAAAAATTGCAATAATCAAGGATGAGGCAGAGCTATTGAAGTTGAAAGATGAGGAAAAAGTATTGAAAGGACTCGTTGAACAACTCAAAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGGAGGAGCGATTATGGAAAGAAAAAGAGGAAAAGAAACGTTTGGAGAGAGAAAAAGATGGGACTAAAAAAACTGAGTCAGAAACAACTAGTGTTGGGGAAAGCAAAACTCATGAAGAAGACAATTGGAAAAAAAATGAAGCTATAGAAAATTATGACAAGGAATATAAACAAGGAGAAGGCAACGATGATGATAAAATTGGGAACTGGGAGGACTCTGCCACAGATCAGGTTAGACATGCTTGTTTGTTTTGA | 876 | 40.3 | MKQWRGLNSESLATLWVLCTALALAPAPFVGSVSSPKHQFRGISPQDEMYYKSSDMIKCRDGSNKFSKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDDICDCCDGSDEYDSKVKCPNTCWETGKVARDKLKKKISTFEEGVKIRKQEVEQAKIAIIKDEAELLKLKDEEKVLKGLVEQLKERKEQIEKVEEEERLWKEKEEKKRLEREKDGTKKTESETTSVGESKTHEEDNWKKNEAIENYDKEYKQGEGNDDDKIGNWEDSATDQVRHACLF | 291 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 42616507 | 42622329 | + | CePI673135_02g025620.1 | Cec02g2562 | 197615 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec02g2562 | 291 | PANTHER | N-LINKED OLIGOSACCHARIDE PROCESSING | 21 | 246 | IPR039794 | GO:0006491(PANTHER)|GO:0017177(PANTHER) | |
| Cec02g2562 | 291 | Coils | Coil | 165 | 232 | - | - | |
| Cec02g2562 | 291 | MobiDBLite | consensus disorder prediction | 217 | 278 | - | - | |
| Cec02g2562 | 291 | Pfam | Glucosidase II beta subunit-like | 34 | 170 | IPR028146 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g0233 | Cec-Chr2:2231965 | Cec02g2562 | Cec-Chr2:42616507 | 4.00E-25 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec02g2562 | K08288 | - | csv:101221877 | 454.136 |