Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0005 ATGGCCACCTTCTCTTGGTACCTCCTATTTTCTCTTTCATTTGTTCTCAATGCCTATTTGAAAGGAACCATGGCAGATGAAGTTCAGAATGATGTGAATGATCAGGCGGCAGATATTGCCCCCTTTGATCCCACTAAGAAGAAGAAGAAGAAGAAGAAGGTTGTGCTTCAGGATCCAACTGATGAGGTTGTTGACAAGTTAGTGGAGAAAACTGAAAGTTTGTCTGTTTCTGATGGTTTGGAGACTACCACATTTTCTGGACTTAAAAAGAAGAAGAAAAAACCAGTAGAGGCTAGCTCCTTGAATGATGACGGTGCAGATGCTACGGAGGATTTGGAAGATCAAGCGGGGGAAAATGAAGAGCGTGAGGGAATTGTTCTACAATATCGTTATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAATATTCTTAGAGAGAATAATCCAGAACTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCACCGGCAGCCAGATCATGTTATGGCTTTCTTACTAGCCGAACTGGGAACCAGTGGCTCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTCGAAGGAATTCTGCGTCGATACGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCGGACACTATCCTTTCAAAGGAGAACCGACTTTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGATTTGTGGCTCGTGTTGGCCGGAGGAACACTGGGACATGA 885 43.73 MATFSWYLLFSLSFVLNAYLKGTMADEVQNDVNDQAADIAPFDPTKKKKKKKKVVLQDPTDEVVDKLVEKTESLSVSDGLETTTFSGLKKKKKKPVEASSLNDDGADATEDLEDQAGENEEREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 102601 109583 + CePI673135_03g000050.1 Cec03g0005 197629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0005 294 MobiDBLite consensus disorder prediction 104 118 - -
Cec03g0005 294 SMART eIF2Bneu4 164 273 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec03g0005 294 MobiDBLite consensus disorder prediction 87 123 - -
Cec03g0005 294 Pfam Domain found in IF2B/IF5 163 272 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec03g0005 294 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 49 280 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Cec03g0005 294 Gene3D - 137 279 - -
Cec03g0005 294 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 139 246 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec03g0005 294 FunFam Eukaryotic translation initiation factor 2 subunit 137 279 - -
Cec03g0005 294 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 243 278 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0005 K03238 - csv:101220978 511.916