Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0008 ATGGATCTTGTCCTGTTGGAGAAGGCTCTAGTGGGGATCTTCGTGGCCATGGTTGTTGCCATTAGCATATCCAAATTGAGGGGAAAGCGTTTTAAACTCCCACCAGGTCCCCTTCCCATCCCCATATTTGGGAATTGGCTGCAGGTTGGGGATGACTTGAACCACCGCAACTTGACGGAGCTGGCCAAAAAGTTCGGTGACATATTGCTGTTGAGAATGGGGCAACGAAACTTGGTGGTGATTTCTTCACCAGAGTTGGCCAAGGAAGTGCTACACACCCAAGGAGTAGAATTTGGGTCTAGGACAAGAAACGTGGTGTTCGATATCTTCACAGATAAGGGTCAAGATATGGTGTTCACGGTGTACGGCAAGCACTGGATGAAAATGAGGCGAATCATGACCATTCCTTTTTTCACCAATAAGGTGGTTCAGCAGAACAGGTTTAGTTGGGAGGACGAGGCTGCCAGAGTTGTGGAGGATCTAAAGAATAACCCAGAAGCCTCAACCACCGGCGTGGTTCTGAGGAAGCGGCTACAGCTTCTAATGTATAACAATATGTACAGAATGATGTTTGACAAGAGATTCGACAGCATGGAAGACCCTCTGTTCAACAACCTTAAGCATATAAACGCAGAGAGGAGTCGACTATCTCAGAGCTTTGAATACAACTATGGTGATTTCATCCCCATACTCAGGCCTTTCCTTAGAGGCTATTTGAATGTGTGTAAGGACGTCAAAGAGAGGAGGCTCAAGCTCTTCAAAGACCATTTTGTCGATGAGAGGAGGAGACTAACTAGCACCATGAGCAACAAGGAGGATGGTGTAAAATGTGGCATTGATCATATTGTGGAGGCTCAAGAGAATGGTGAGATCACCGAAGACAATGTTCTCTTCATTGTTGAGAATATCAACGTTGCTGCTATTGAGACAACATTGTGGTCAATGGAGTGGGCTATTGCGGAGCTAGTTAACCACCCCAACATCCAGAAAAAGCTGAGGGACGAGCTCGATTTGGTGCTCGGATATGGCGTCCAAATTACGGAGCCCGACATTCGCAATCTACCTTACTTGCAGGCTGTCATCAAGGAGACTTTGCGGTTGAGAATGGCCATTCCTTTGTTAGTGCCTCACATGAATCTCCAAGACGCCAAGTTGGCTTCTTATGACATCCCGGCAGAAAGCAAGATTCTAGTGAATGCATGGTGGCTGGCCAACAACCCTGATCACTGGAACAAACCTCAAGAATTCCGACCTGAGAGGTTTTTGGAGGAGGAGCAACATGTAGATCCTATAGGGAATGACTTTAGATACCTTCCTTTCGGTGCCGGAAGGAGGAGCTGCCCTGGCATTGTTCTTGCCTTGCCCATCGTTGCTATTACTTTGGGTCGTCTCATTCAAAATTTTGAGCTGCTGCCTCCTCTTGGACACTCCAAGGTTGATACCACCGAAAAGCCTGGACAGTTCAGCTTGCAAATATTCAACCACTCTACTATTGTGGCAAAGTCAAGGTCTTTATGA 1518 46.84 MDLVLLEKALVGIFVAMVVAISISKLRGKRFKLPPGPLPIPIFGNWLQVGDDLNHRNLTELAKKFGDILLLRMGQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGKHWMKMRRIMTIPFFTNKVVQQNRFSWEDEAARVVEDLKNNPEASTTGVVLRKRLQLLMYNNMYRMMFDKRFDSMEDPLFNNLKHINAERSRLSQSFEYNYGDFIPILRPFLRGYLNVCKDVKERRLKLFKDHFVDERRRLTSTMSNKEDGVKCGIDHIVEAQENGEITEDNVLFIVENINVAAIETTLWSMEWAIAELVNHPNIQKKLRDELDLVLGYGVQITEPDIRNLPYLQAVIKETLRLRMAIPLLVPHMNLQDAKLASYDIPAESKILVNAWWLANNPDHWNKPQEFRPERFLEEEQHVDPIGNDFRYLPFGAGRRSCPGIVLALPIVAITLGRLIQNFELLPPLGHSKVDTTEKPGQFSLQIFNHSTIVAKSRSL 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 116409 118346 + CePI673135_03g000080.1 Cec03g0008 197632
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0008 505 Gene3D Cytochrome P450 23 498 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 Pfam Cytochrome P450 34 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 FunFam Trans-cinnamate 4-monooxygenase 23 497 - -
Cec03g0008 505 SUPERFAMILY Cytochrome P450 34 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 CDD CYP73 63 496 - -
Cec03g0008 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cec03g0008 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 503 - GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER)
Cec03g0008 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g0008 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1995 Cec-Chr2:37798934 Cec03g0008 Cec-Chr3:116409 9.70E-242 dispersed
Cec03g0008 Cec-Chr3:116409 Cec11g1183 Cec-Chr11:24195778 4.30E-181 dispersed
Cec03g0008 Cec-Chr3:116409 Cec04g1708 Cec-Chr4:36168289 2.40E-59 transposed
Cec03g0008 Cec-Chr3:116409 Cec06g1942 Cec-Chr6:32760195 2.40E-59 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0008 K00487 - csv:101208511 910.598