Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec03g0015 | ATGGCCTCCTCTTCCGGGAGCTTAGACACCTCTGCTAATTCTCATCCCTCTTTCACTTTCTCTACTCATCCTTTTATGACTTCTTCTTACTCTGACCTTCTAGCCTCTGGCAACAACCATCCTCCTTCCTCCGCCGCACCCCACGCCGTTCTCCGTGGTTCCGGCACCGGAGTTCCTAAATTCAAATCCCTCCCTCCTCCTTCTCTCCCTCTCTCTCCTCCTCCCCTCTCTCCTTCTTCCTTTTTCGCTATTCCTCCTGGCTTGAGTCCCGCCGAGCTTCTTGATTCCCCTGTTCTTCTCAGTGCTTCTCATGTTTTGCCGTCGCCGACCACTGGGAGTTTCCCGTCTCAGTCGTTGAATTGGAAGAGCCATTCTGGGTATAATCAGCAGAGCATTAAGGAAGAAAACAAATATCTGTCTAATTTCTCATTTCAAACTCAATCGTCAAAGCTACCGCCGACGTCTTTTCAGCCTTCATCCACCACAGCTCCCACGACTCAGGGATGGACTTTTCAAGAACAGCGCAAGAAAGAGGATGGTTTTTCGTCGGAGAAGAATATGGTGAAGCCGGAGTTTGGATCGATGCGGAGCTTCTCACCGGAATATGGGGTTGTTCAAAACCAAAACCAAACCAATGGCAGCGGGGAGTTGCAGTCTGATTACGGCAACAATTACCCTCAACAATCTCAGACGGTGAATCGAAGATCGGACGACGGCTACAACTGGAGAAAATACGGCCAAAAACAGGTTAAAGGAAGTGAAAATCCGAGAAGCTATTACAAGTGCACTTTCCCCAATTGCCCAACAAAGAAAAAGGTCGAAAGATCCTTAGATGGACAGATTACGGAGATCGTTTACAAAGGCAGCCATAACCATCCAAAGCCCCAATCCACAAGGAGGTCGTCGCTGTCGTCGGCCGGTTCTTCCCACACCATGGTGGCTTCGAATCAGGCCACCAGCGAGATGGCGGACCAGTCATTTACAACCCAAGGCAGCGGCCAATTTGATGGCGTTGCAACGCCGGAGAATTCCTCGATTTCAATTGGCGACGACGACTTCGATCGGAGCTCTCAAAAGAGCAAATCCGGAGGGGACGATTTTGATGAGGACGAACCAGAGGCTAAGAGATGGCGCAGAGAAGGTGACAACAATGAAGGTATTTCGGCGGTCGGTAGCCGGACGGTGAGAGAGCCGAGAGTCGTCGTCCAAACCACCAGCGACATCGACATTCTCGACGATGGTTACCGGTGGAGGAAGTATGGTCAGAAAGTTGTGAAGGGAAACCCAAATCCAAGGAGTTACTACAAATGTACAAATCCAGGATGTCCAGTAAGAAAGCATGTGGAGAGAGCTTCACATGATCTAAGAGCAGTGATCACAACTTATGAAGGGAAGCACAACCACGATGTTCCACCGGCACGTGGGAGTGGAAGCCATTCCCTCAGCCGTCCATTCCCCAACAACGAAGCTCCGGCAACTGCGATCCGGCCATCGGCGTTGACCCATCAGTCAAACAACGGGGGGCATCTGCAGGGTCTGAGGCTGCAGCAATCTTCAGATTCCCAAGCAGCATTCACAGTGGAAATGGTGCAAAATGGGAATGGATTTTCATTCCCAGAATTTGGAAACTCAATGGGAATGGGAATGGGAATGGGTTCCTACATCAACCAAACACAGCCCAATGATAATTTGTTCACCAGAGCCAAAGAAGAGCCAAGAGATCATGACATGTTCATCCAATCTCTCCTATGTTAG | 1755 | 49.97 | MASSSGSLDTSANSHPSFTFSTHPFMTSSYSDLLASGNNHPPSSAAPHAVLRGSGTGVPKFKSLPPPSLPLSPPPLSPSSFFAIPPGLSPAELLDSPVLLSASHVLPSPTTGSFPSQSLNWKSHSGYNQQSIKEENKYLSNFSFQTQSSKLPPTSFQPSSTTAPTTQGWTFQEQRKKEDGFSSEKNMVKPEFGSMRSFSPEYGVVQNQNQTNGSGELQSDYGNNYPQQSQTVNRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSLSSAGSSHTMVASNQATSEMADQSFTTQGSGQFDGVATPENSSISIGDDDFDRSSQKSKSGGDDFDEDEPEAKRWRREGDNNEGISAVGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHDVPPARGSGSHSLSRPFPNNEAPATAIRPSALTHQSNNGGHLQGLRLQQSSDSQAAFTVEMVQNGNGFSFPEFGNSMGMGMGMGSYINQTQPNDNLFTRAKEEPRDHDMFIQSLLC | 584 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 179653 | 181951 | - | CePI673135_03g000150.1 | Cec03g0015 | 197639 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec03g0015 | 584 | FunFam | WRKY transcription factor | 227 | 296 | - | - | |
| Cec03g0015 | 584 | MobiDBLite | consensus disorder prediction | 149 | 171 | - | - | |
| Cec03g0015 | 584 | SUPERFAMILY | WRKY DNA-binding domain | 235 | 295 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | MobiDBLite | consensus disorder prediction | 200 | 236 | - | - | |
| Cec03g0015 | 584 | Gene3D | WRKY domain | 398 | 464 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | ProSiteProfiles | WRKY domain profile. | 237 | 295 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | MobiDBLite | consensus disorder prediction | 286 | 392 | - | - | |
| Cec03g0015 | 584 | MobiDBLite | consensus disorder prediction | 462 | 492 | - | - | |
| Cec03g0015 | 584 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 161 | 493 | IPR044810 | GO:0003700(InterPro) | |
| Cec03g0015 | 584 | MobiDBLite | consensus disorder prediction | 149 | 241 | - | - | |
| Cec03g0015 | 584 | FunFam | WRKY transcription factor 33 | 398 | 464 | - | - | |
| Cec03g0015 | 584 | Pfam | WRKY DNA -binding domain | 237 | 293 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | Pfam | WRKY DNA -binding domain | 412 | 469 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | SMART | WRKY_cls | 236 | 294 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | SMART | WRKY_cls | 411 | 470 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | SUPERFAMILY | WRKY DNA-binding domain | 403 | 471 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | ProSiteProfiles | WRKY domain profile. | 406 | 471 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | MobiDBLite | consensus disorder prediction | 348 | 383 | - | - | |
| Cec03g0015 | 584 | MobiDBLite | consensus disorder prediction | 31 | 76 | - | - | |
| Cec03g0015 | 584 | Gene3D | WRKY domain | 223 | 296 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
| Cec03g0015 | 584 | MobiDBLite | consensus disorder prediction | 291 | 347 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g2013 | Cec-Chr2:37960284 | Cec03g0015 | Cec-Chr3:179653 | 9.30E-79 | dispersed | |
| Cec03g0015 | Cec-Chr3:179653 | Cec10g2249 | Cec-Chr10:36799289 | 5.80E-89 | dispersed | |
| Cec03g0015 | Cec-Chr3:179653 | Cec05g2623 | Cec-Chr5:37015293 | 3.70E-67 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 29157 | PF03106 | WRKY | 3.60E-25 | CL0274 | Cec | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec03g0015 | K13424 | - | csv:101207158 | 1038.48 |