Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0015 ATGGCCTCCTCTTCCGGGAGCTTAGACACCTCTGCTAATTCTCATCCCTCTTTCACTTTCTCTACTCATCCTTTTATGACTTCTTCTTACTCTGACCTTCTAGCCTCTGGCAACAACCATCCTCCTTCCTCCGCCGCACCCCACGCCGTTCTCCGTGGTTCCGGCACCGGAGTTCCTAAATTCAAATCCCTCCCTCCTCCTTCTCTCCCTCTCTCTCCTCCTCCCCTCTCTCCTTCTTCCTTTTTCGCTATTCCTCCTGGCTTGAGTCCCGCCGAGCTTCTTGATTCCCCTGTTCTTCTCAGTGCTTCTCATGTTTTGCCGTCGCCGACCACTGGGAGTTTCCCGTCTCAGTCGTTGAATTGGAAGAGCCATTCTGGGTATAATCAGCAGAGCATTAAGGAAGAAAACAAATATCTGTCTAATTTCTCATTTCAAACTCAATCGTCAAAGCTACCGCCGACGTCTTTTCAGCCTTCATCCACCACAGCTCCCACGACTCAGGGATGGACTTTTCAAGAACAGCGCAAGAAAGAGGATGGTTTTTCGTCGGAGAAGAATATGGTGAAGCCGGAGTTTGGATCGATGCGGAGCTTCTCACCGGAATATGGGGTTGTTCAAAACCAAAACCAAACCAATGGCAGCGGGGAGTTGCAGTCTGATTACGGCAACAATTACCCTCAACAATCTCAGACGGTGAATCGAAGATCGGACGACGGCTACAACTGGAGAAAATACGGCCAAAAACAGGTTAAAGGAAGTGAAAATCCGAGAAGCTATTACAAGTGCACTTTCCCCAATTGCCCAACAAAGAAAAAGGTCGAAAGATCCTTAGATGGACAGATTACGGAGATCGTTTACAAAGGCAGCCATAACCATCCAAAGCCCCAATCCACAAGGAGGTCGTCGCTGTCGTCGGCCGGTTCTTCCCACACCATGGTGGCTTCGAATCAGGCCACCAGCGAGATGGCGGACCAGTCATTTACAACCCAAGGCAGCGGCCAATTTGATGGCGTTGCAACGCCGGAGAATTCCTCGATTTCAATTGGCGACGACGACTTCGATCGGAGCTCTCAAAAGAGCAAATCCGGAGGGGACGATTTTGATGAGGACGAACCAGAGGCTAAGAGATGGCGCAGAGAAGGTGACAACAATGAAGGTATTTCGGCGGTCGGTAGCCGGACGGTGAGAGAGCCGAGAGTCGTCGTCCAAACCACCAGCGACATCGACATTCTCGACGATGGTTACCGGTGGAGGAAGTATGGTCAGAAAGTTGTGAAGGGAAACCCAAATCCAAGGAGTTACTACAAATGTACAAATCCAGGATGTCCAGTAAGAAAGCATGTGGAGAGAGCTTCACATGATCTAAGAGCAGTGATCACAACTTATGAAGGGAAGCACAACCACGATGTTCCACCGGCACGTGGGAGTGGAAGCCATTCCCTCAGCCGTCCATTCCCCAACAACGAAGCTCCGGCAACTGCGATCCGGCCATCGGCGTTGACCCATCAGTCAAACAACGGGGGGCATCTGCAGGGTCTGAGGCTGCAGCAATCTTCAGATTCCCAAGCAGCATTCACAGTGGAAATGGTGCAAAATGGGAATGGATTTTCATTCCCAGAATTTGGAAACTCAATGGGAATGGGAATGGGAATGGGTTCCTACATCAACCAAACACAGCCCAATGATAATTTGTTCACCAGAGCCAAAGAAGAGCCAAGAGATCATGACATGTTCATCCAATCTCTCCTATGTTAG 1755 49.97 MASSSGSLDTSANSHPSFTFSTHPFMTSSYSDLLASGNNHPPSSAAPHAVLRGSGTGVPKFKSLPPPSLPLSPPPLSPSSFFAIPPGLSPAELLDSPVLLSASHVLPSPTTGSFPSQSLNWKSHSGYNQQSIKEENKYLSNFSFQTQSSKLPPTSFQPSSTTAPTTQGWTFQEQRKKEDGFSSEKNMVKPEFGSMRSFSPEYGVVQNQNQTNGSGELQSDYGNNYPQQSQTVNRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSLSSAGSSHTMVASNQATSEMADQSFTTQGSGQFDGVATPENSSISIGDDDFDRSSQKSKSGGDDFDEDEPEAKRWRREGDNNEGISAVGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHDVPPARGSGSHSLSRPFPNNEAPATAIRPSALTHQSNNGGHLQGLRLQQSSDSQAAFTVEMVQNGNGFSFPEFGNSMGMGMGMGSYINQTQPNDNLFTRAKEEPRDHDMFIQSLLC 584
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 179653 181951 - CePI673135_03g000150.1 Cec03g0015 197639
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0015 584 FunFam WRKY transcription factor 227 296 - -
Cec03g0015 584 MobiDBLite consensus disorder prediction 149 171 - -
Cec03g0015 584 SUPERFAMILY WRKY DNA-binding domain 235 295 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 MobiDBLite consensus disorder prediction 200 236 - -
Cec03g0015 584 Gene3D WRKY domain 398 464 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 ProSiteProfiles WRKY domain profile. 237 295 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 MobiDBLite consensus disorder prediction 286 392 - -
Cec03g0015 584 MobiDBLite consensus disorder prediction 462 492 - -
Cec03g0015 584 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 161 493 IPR044810 GO:0003700(InterPro)
Cec03g0015 584 MobiDBLite consensus disorder prediction 149 241 - -
Cec03g0015 584 FunFam WRKY transcription factor 33 398 464 - -
Cec03g0015 584 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 Pfam WRKY DNA -binding domain 412 469 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 SMART WRKY_cls 236 294 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 SMART WRKY_cls 411 470 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 MobiDBLite consensus disorder prediction 348 383 - -
Cec03g0015 584 MobiDBLite consensus disorder prediction 31 76 - -
Cec03g0015 584 Gene3D WRKY domain 223 296 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0015 584 MobiDBLite consensus disorder prediction 291 347 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2013 Cec-Chr2:37960284 Cec03g0015 Cec-Chr3:179653 9.30E-79 dispersed
Cec03g0015 Cec-Chr3:179653 Cec10g2249 Cec-Chr10:36799289 5.80E-89 dispersed
Cec03g0015 Cec-Chr3:179653 Cec05g2623 Cec-Chr5:37015293 3.70E-67 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29157 PF03106 WRKY 3.60E-25 CL0274 Cec TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0015 K13424 - csv:101207158 1038.48