Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec03g0022 | ATGAATCCCTCTACTCTCCTCGCTTCTCATTTCTCAAACAACCGCTGCCCTTTGCTCAATCCTCTCCCTCTTCGAACGTCCACAAACTTCAATCTCACCAAACGACGCCACTTCAGAGTCTCAATTCCGCGTGCCTCCTCGGAGGTCACAGAACAACCTGTCTCCTCCTCGTCGCCTTCCGGGCTAGATATCTTTGGTGGCAAGAAGGAGCTCACTGGGATTCAGCCTATTGTTCAGCTAATCCCTCCGCCTTTACGGTTAGCAACCTCCGCCATTGTTGTCGCCGGAGCTGTAGCCGCCGGTTATGGCCTGGGGCTTCGCTTTGGTAAGTCCCGGAACGCAGCTTTGGGTGGGGCTGCTGCTCTCGCTGCTGCTAGTGGAGCTGCCGTATACTCCTTGAATTCATGTGTTCCTGAAGTTGCGGCTGTCGATTTGCATAATTATGTTGCCGGATTTGATGATCCTAAGAATGTGAAGAAGGAGGAAATAGAAAGCATTGCCACAAAATATGGAGTTAGCAAGCAAGATGAGGCGTTTAACGCGGAGCTTTGTGACTTGTATTGTCGATTTGTGTCTTCTGTTCTTCCACCGGGAAGTCAAGATCTCAATGGTGATGAGGTTGACACAATCATCAAGTTCAAAAGTGCCTTGGGCATTGATGACCCCGATGCAGCTGGTATGCATATGGAAATTGGTAGAAGAATTTTTAGGCAACGGCTTGAAACTGGAGATCGTGATGGTGACATAGAGGAACGTCGGGATGAACCTCCAGTGCAGGCATTTCAGAAACTTATATACGTATCAACCCTTGTGTTTGGAGACGCATCATCTTTCCTGTTACCTTGGAAACGTGTTTTTAAAGTTACTGATTCTCAGGTTGAGATTGCCATCCGTGACAACGCTCAACGCCTGTATATTTCTGAGCTAAAATCAGTTGGAAGAGATGTTAATGCGGAAAAGCTCATAAGCCTCAAAGATGCACAACGTTTGTATCGACTTTCTGATGAGCTGGCAGATGAGTTGTTTAAGGAGCATACAAGGAAGCTGGTTGAGGAAAATATATCAGTAGCACTCAATATACTCAAGTCCAGAACGAAGGCAGCCCGGGGAGTCATAGAAGTTGTGGAAGAGCTTGATAAGATACTTGAGTTCAACAGTTTGCTCATTTCTTTAAAGAACCATGCAGATGCTAATCGCTTTGCTCCCGGGGTTGGCCCAGTTTCTCTCCTGGGTGGAGAGTATGATGGTGACCGAAAGATGGATGATTTGAAGCTCCTCTATCGAGCCTATGTTACAGATTCTTTATCTAGTGGCCGCATGGAAGAAGATAAGCTCGCTGCCTTGAATCAGCTGAGAAATATATTTGGTTTAGGGAAGCGAGAAACAGAAAACATTATCCTTGACGTTACCTCAAAGGTTTATCGCAAACGCCTTGCACAGTCTGTAAGTGGTGGTGATTTGGAGATAGCAGATAGTAAAGCCGCCTTCCTCCAAAATCTCTGTGAGGAGCTTCACTTTGACCCATTGAAGGCCAGTGAGATTCATGAAGAGATTTATCGACAAAAGCTTCAGCAATGTGTTGCTGATGGAGAGCTGAGTGATGAGGATGTATCGGCGCTACTGAGGCTAAGAGTTATGCTTTGCATACCTCAACAGACTGTCGAAGCGGCACATACAGATATTTGTGGTTCCTTGTTTGAAAAGGTTGTAAAGGAGGCAATTGCTGCAGGTGTTGATGGTTATGATGCAGATATAAAGAAATCTGTGAGGAAGGCAGCCCACAGCTTGCGCTTGACAAGGGAGGCTGCCATGTCGATTGCAAGCAAAGCAGTTCGGAAGATTTTCATAAACTATATAAAGCGAGCTCGTGGAGCTGGAAATCGTACTGAAGCTGCAAAAGAACTTAAGAAGATGATAGCTTTTAATACGCTAGTTGTTACAGAATTGGTGGCTGATATAAAAGGAGAATCTGCTGATGCTGATACCTCATCGGAAGAGCCTATCAAAGAAGAAGAGGAACAGCTTGAGGAGGATGAGGAATGGGAACTTCAGAGTTTGAAGAAAATAAGACCAAATGAAGAGCTTTCGGCAAAATGGGGGAAACCTGGTCAGACAGAGATAACTTTGAAGGATGACCTGCCAGAAAGAGAACGAACTGACCTTTACAAGACATATTTACTTTTTTGTTTAACTGGTGAAGTTACCCGAATTCCATTTGGTGCTCAAATTACGACAAAGAAGGATGATTCCGAGTACCTCTTACTAAATCAGCTTGGTAACATTTTGGGTTTAACCACTAAGGAGATTGTTGAAGTACATAGGAGCCTAGCTGAGCAGGCCTTCCAGCAACAGGCTGAGGTAATTTTGGCTGATGGTCAACTTACAAAGGCCAGGGTAGAACAGCTCAATGAGTTGCAGGAGCAAGTTGGGTTGCCTTCTGAATATGCCAATAAGATCATTAAGAGCATAACAACCACAAAAATGGCTGCTGCCATTGAAACTGCTGTCGGTCAAGGGCGGCTCAACATTAAGCAGATTAGAGAACTTAAGGAAGCAAAGGTTGATTTAGATAGCATGATATCTGAGAGATTGCGAGAGAATCTCTTCAAAAAGACTGTGGACGACATTTTCTCATCCGGCACTGGCGAGTTTGATGAAGAAGAAGTCTATGAGAAAATCCCATTGGACCTCAACATTAATGCTGAGAAGGCAAAAGGGGTTGTACACGAGCTGGCAGAAAGCAGGTTGTCAAACTCGTTAATTCAGGCTGTAGCACTGTTGAGGCAGAGGAACCGTCAGGGGGTGGTATCATCTCTCAATGATCTTCTCGCATGTGACAAAGCCGTTCCATCAAAACCTTTATCATGGGACGTGTCTGAAGAACTCGCCGATTTGTACTCTGTATACGCGAAGAGTGAGCCGACGCCTGAGAAGTTGTCTCGTTTGCAATATTTGCTGGGCATAGATGACTCTACTGCAGCTGCTATTCGAGAGATGGGAGATAGATTACAACCTATTGACCCGGTGGATTTAGTCATACGACTCATATCTACAAGCCACAGTTTATCCGCTACCTACTATAAGAGTTCGTGTCCAAAGTTACTCTCCATTGTTCGACGTGAAGTCGTGAAAGCAGTGGACAAAGAGTACAGAATGGGAGCATCGTTGCTTCGCCTCCATTTTCACGACTGCTTTGGATGTGATGCGTCGGTGCTATTGGACGACACGTCAAACTTCACTGGAGAAAAGACGGCAATCCCAAACAAAGATTCGTTGAGAGGTTTTGAAGTGATCGACTCAATTAAAACGCTAGTGGAAGCTGCTTGTCCTTCTGTGGTTTCTTGTGCTGATATTTTGTCCCTTGCAGCTCGAGACTCGGTGGTTACCCTTGGGGGGCCTTCGTGGGTAGTTGGGCTTGGGCGGAGGGACTCGACCACAGCCAGCTTCGACAGCGCAAACAATGATCTTCCTTCTCCCTTCCTCGACCTTCCCGATCTCATCTCTGCCTTTTCCAACAAAGGCTTCGACACCAAAGAATTGGTCGCCCTTTCAGGATCTCACACGATCGGACAAGCCAGGTGCTCCATGTTCAGAGTAAGAGCCCATAACGAAACCACCACCATTGATTCAGAGTTTGCAGCCTCTCTAAGATCCAATTGCCCTTTCTCCGGCGACGACCAAAGTCTTTCTCCTTTGGATCTCAAAACCCAATCCTTATTCGACAATGCTTATTTCAAGAACTTGGTCCAAAACAAAGGCCTTCTTCATTCCGACCAAGCCCTCTTCAGCAACTCCTCCGCCGATTCTCATGTCACTTCCTATGTCTCCGACTCTTCTGCTTTCTTCTCCGACTTCGCCTCCGCCATGGTTAAGATGTCCAACCTCTCCCCACTCACCGGCTCCGACGGCCAGATTCGTTCCGACTGCCGCAAAATTAACTAA | 3942 | 46.17 | MNPSTLLASHFSNNRCPLLNPLPLRTSTNFNLTKRRHFRVSIPRASSEVTEQPVSSSSPSGLDIFGGKKELTGIQPIVQLIPPPLRLATSAIVVAGAVAAGYGLGLRFGKSRNAALGGAAALAAASGAAVYSLNSCVPEVAAVDLHNYVAGFDDPKNVKKEEIESIATKYGVSKQDEAFNAELCDLYCRFVSSVLPPGSQDLNGDEVDTIIKFKSALGIDDPDAAGMHMEIGRRIFRQRLETGDRDGDIEERRDEPPVQAFQKLIYVSTLVFGDASSFLLPWKRVFKVTDSQVEIAIRDNAQRLYISELKSVGRDVNAEKLISLKDAQRLYRLSDELADELFKEHTRKLVEENISVALNILKSRTKAARGVIEVVEELDKILEFNSLLISLKNHADANRFAPGVGPVSLLGGEYDGDRKMDDLKLLYRAYVTDSLSSGRMEEDKLAALNQLRNIFGLGKRETENIILDVTSKVYRKRLAQSVSGGDLEIADSKAAFLQNLCEELHFDPLKASEIHEEIYRQKLQQCVADGELSDEDVSALLRLRVMLCIPQQTVEAAHTDICGSLFEKVVKEAIAAGVDGYDADIKKSVRKAAHSLRLTREAAMSIASKAVRKIFINYIKRARGAGNRTEAAKELKKMIAFNTLVVTELVADIKGESADADTSSEEPIKEEEEQLEEDEEWELQSLKKIRPNEELSAKWGKPGQTEITLKDDLPERERTDLYKTYLLFCLTGEVTRIPFGAQITTKKDDSEYLLLNQLGNILGLTTKEIVEVHRSLAEQAFQQQAEVILADGQLTKARVEQLNELQEQVGLPSEYANKIIKSITTTKMAAAIETAVGQGRLNIKQIRELKEAKVDLDSMISERLRENLFKKTVDDIFSSGTGEFDEEEVYEKIPLDLNINAEKAKGVVHELAESRLSNSLIQAVALLRQRNRQGVVSSLNDLLACDKAVPSKPLSWDVSEELADLYSVYAKSEPTPEKLSRLQYLLGIDDSTAAAIREMGDRLQPIDPVDLVIRLISTSHSLSATYYKSSCPKLLSIVRREVVKAVDKEYRMGASLLRLHFHDCFGCDASVLLDDTSNFTGEKTAIPNKDSLRGFEVIDSIKTLVEAACPSVVSCADILSLAARDSVVTLGGPSWVVGLGRRDSTTASFDSANNDLPSPFLDLPDLISAFSNKGFDTKELVALSGSHTIGQARCSMFRVRAHNETTTIDSEFAASLRSNCPFSGDDQSLSPLDLKTQSLFDNAYFKNLVQNKGLLHSDQALFSNSSADSHVTSYVSDSSAFFSDFASAMVKMSNLSPLTGSDGQIRSDCRKIN | 1313 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 273064 | 287474 | + | CePI673135_03g000220.1 | Cec03g0022 | 197646 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec03g0022 | 1313 | Pfam | Peroxidase | 1038 | 1276 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 1179 | 1189 | IPR019793 | - | |
| Cec03g0022 | 1313 | Gene3D | - | 1025 | 1313 | - | - | |
| Cec03g0022 | 1313 | Gene3D | Peroxidase, domain 2 | 1157 | 1292 | - | - | |
| Cec03g0022 | 1313 | FunFam | Peroxidase | 1157 | 1292 | - | - | |
| Cec03g0022 | 1313 | ProSiteProfiles | Plant heme peroxidase family profile. | 1021 | 1313 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PANTHER | PROTEIN TIC110, CHLOROPLASTIC | 6 | 1003 | IPR031610 | GO:0045037(PANTHER)|GO:0061927(PANTHER) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1231 | 1246 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1093 | 1106 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1112 | 1122 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1287 | 1300 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1131 | 1146 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1178 | 1190 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1031 | 1050 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1055 | 1075 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Plant peroxidase signature | 1247 | 1264 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Haem peroxidase superfamily signature | 1179 | 1194 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Haem peroxidase superfamily signature | 1113 | 1130 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Haem peroxidase superfamily signature | 1233 | 1248 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Haem peroxidase superfamily signature | 1131 | 1143 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | PRINTS | Haem peroxidase superfamily signature | 1053 | 1067 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | FunFam | Peroxidase | 1025 | 1161 | - | - | |
| Cec03g0022 | 1313 | SUPERFAMILY | Heme-dependent peroxidases | 1022 | 1313 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cec03g0022 | 1313 | Pfam | Chloroplast envelope transporter | 71 | 650 | IPR031610 | - | |
| Cec03g0022 | 1313 | ProSitePatterns | Peroxidases active site signature. | 1053 | 1064 | IPR019794 | GO:0004601(InterPro) | |
| Cec03g0022 | 1313 | CDD | secretory_peroxidase | 1022 | 1312 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Cec03g0022 | 1313 | Coils | Coil | 669 | 689 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec03g0022 | Cec-Chr3:273064 | Cec11g0607 | Cec-Chr11:6671703 | 2.00E-97 | dispersed | |
| Cec08g1376 | Cec-Chr8:25645370 | Cec03g0022 | Cec-Chr3:273064 | 1.50E-17 | dispersed | |
| Cec03g0022 | Cec-Chr3:273064 | Cec04g1691 | Cec-Chr4:36042104 | 4.10E-82 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec03g0022 | - | - | - | 0.0 |