Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0044 ATGGTTGACAACGGCGAGGAGAAGTTACTGGCTATGGCTCGCCACATAGCCAAGACCATGGGTCGCAACGAGTCCATGGCTGATGATATTCTTCAGATTTTTTCCAATTTTGATGCTAGGTTTTCCCTTGATAAGTTGTCTGATAAACCCGATGAGCTTGACCCCAGAGCCCCCCCCGCTTTGCAACGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATACTTGGCTGCCGACCACCCCATTTGGGCTGACTCCGCTGATTCCTCTGCTTTTCTTGACGCTATCGATGAGTTGATGGTTATCATTAGGGACTGGGCTCCTATGGCTAGGGATAAGTCTGTTACCGCCTACCTTGCTCGCGCCGACGATCTGATGCAGCAGGCCATGTTCCGTGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGTGAGTCTTTTGAATTGACTCGCCATTTCAGGAACGGCGAGTCAACGGGGGATTTCTGCTTCGATTCTGAGGAAGATGAGGAAGGAATTCTTGGCGATGGCGATGCTCTCCAGATCCCTGTGGCGCAGCCGGTGACGGACTACAACATCGTTATCGATGCACTTCCGTCGGGGACTATCAGCGATCTTCATGAAATAGCGAAGCGTATGGTAGCGGCTGGGTTCGAGAAAGAGTGTTCACACGCTTACAGTAGCTGCAGGAGGGAGTTTTTGGAGGAGAGTCTTTCTAGGTTGGGGTTAAAGAAGCTGAGCATCGATGAAGTTCAAAAGATGCAATGGCATGACCTTGAAGAGGAGATTGAACGCTGGATGAAAGCGATTACTGTCTCCCTTCGAATTCTCTTCCCAAGTGAACGACGCCTCTGCGAACGCGTCTTCGTCGGCCTCTCCTCCACCGCCGATCTTTCTTTCATGGAGGTCTGCCGTGGATCGACTATCCAGCTATTGAATTTTGCAGATGCGGTAGCAATTGGCTCCCGCGCGCCGGAACGACTTTTCAAAATCCTCGATATGTTCGAGACCTTGAGAGACTTGATGCCAGAATTCGATTCAGTATTTTCAGATCAGTACTGCTTATTGCTTAGAAATGAAGCAATTACAATCTGGAAAAGGTTAGGCGGAACAATCAAAGGGATCTTCATGGAGCTTGAGAATTTGATCCGCCGTGATCCGGCTAAAACTCCGGTCCCGGGGGGCGGCCTTCATCCAATCACTCGATATGTGATGAATTACCTTAGAGCAGCCTGTAAATCTCGGCAGACTTTGGAGCAAGTTTTCGAAGAAGCTGCTCTTCCCTCTAAGGATTACACTAAGCTCGAGGACAGAGCAGCAGCATCGTCTTCCTTATCAGTTCAAATGGACTGGATAATGGAGCTTTTAGAGAGCAATTTAGAGGCGAAATCGAAGATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTTCAGAAAGTGAAAGACAGTGAATTAGGGTCAGTTTTAGGCGAGGATTGGATTCGAAAACACTCGGTTAAAAACCGGCAATACCTCGGAAACTACCTGAAAAGCTCATGGAGCAAGGTGGTCGGAGCATTGAAAATGGACAGTGGCACTATAGCTCCGGCTGTGATGAAGGAGAAGCTCCAATCATTCAATATGCAATTTGAAGAAATCTGCCAAACCCAATCCACATGGGTGATATTTGAGCATCAGCTTAGAGAAGAAGCAAGAATCTCAGTTGCCAAAATTCTGTTGCCAGCATATCAAAAGTTCATCGGCAGATACCAGAGTTTACCGGAGTTGGCAAAGCGTACAGACCGGTATTTGAAGTACACGGCAGAGGATATGGAGGCTCGAATCACCGAGCTGTTCGAAGGTGGCGGCGGAGGCGGCTCAGGCAGTGGAAGGAGGTAA 1905 48.82 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLDKLSDKPDELDPRAPPALQRSLKSLDRRISQYLAADHPIWADSADSSAFLDAIDELMVIIRDWAPMARDKSVTAYLARADDLMQQAMFRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEEGILGDGDALQIPVAQPVTDYNIVIDALPSGTISDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLKKLSIDEVQKMQWHDLEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSTADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMPEFDSVFSDQYCLLLRNEAITIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLRAACKSRQTLEQVFEEAALPSKDYTKLEDRAAASSSLSVQMDWIMELLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGEDWIRKHSVKNRQYLGNYLKSSWSKVVGALKMDSGTIAPAVMKEKLQSFNMQFEEICQTQSTWVIFEHQLREEARISVAKILLPAYQKFIGRYQSLPELAKRTDRYLKYTAEDMEARITELFEGGGGGGSGSGRR 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 421672 423576 + CePI673135_03g000440.1 Cec03g0044 197668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0044 634 Gene3D Exocyst complex component Exo70 82 626 - -
Cec03g0044 634 Pfam Exo70 exocyst complex subunit C-terminal 266 618 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cec03g0044 634 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 623 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cec03g0044 634 FunFam Exocyst subunit Exo70 family protein 76 628 - -
Cec03g0044 634 SUPERFAMILY Cullin repeat-like 83 622 IPR016159 -
Cec03g0044 634 Pfam Exocyst complex component Exo70 N-terminal 86 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0044 Cec-Chr3:421672 Cec03g1406 Cec-Chr3:31405084 1.30E-107 dispersed
Cec03g0044 Cec-Chr3:421672 Cec03g0196 Cec-Chr3:2030574 5.50E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0044 K07195 - csv:101204511 1157.13