Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0056 ATGAACAACCCATCACAGGAAAATGTTGAAACAGAAGGCATCTCTCCAAAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTATGTTGGCTTACCAAAGTCTAGGAGTTGTTTATGGGGACCTCAGCACCTCCCCTCTCTATGTCTACAAAACCACCTTCTCTGGGAAATTGAGTCTCCATGAGAATGATGAAGAGATTTATGGGGTTCTATCCTTTATCTTCTGGACATTTACACTCATTGCTCTCTTCAAATATGTTTTCATTGTCATGTCAGCCGACGATAATGGTGAAGGGGGTACCTTTGCACTGTACTCTCTTCTCTGTAGGCATGCTAGATTATGCATATTACCGAATCAAGAGCCTGTAGATGAACAGTTATCAGCATATGACATCAAGGGAATCTCGGAGACAAGGCCGAGTGCTGCTCTAAAGTCTTTTTTTCGGCTGCATCCATCTTTTCGAAGAGGTTTTTTGTTGTTTGTTCTCTTCGGAGCCTGCATGGCTATTGGTGATGGAGTGCTTACTCCTGCAATATCAGTTCTTTCAGCAGTCTCAGGAGTCAAACATAAGATCACTGAACTCCATGAGAATTACGTTGTTTTAATCTCGTGCGTCATCTTAGTTGGACTATTCTCCCTCCAGCATCGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATCACGGTGTGGCTTGTCTGTATTAGTGTTATCGGAATGTATAATATTATCAAATGGAACCCAAGTATTTATCACGCACTCTCTCCAGTTTATATGCTGAAATTCCTTCGAAGCACAGGTGTTGAAGGTTGGATTTCATTAGGAGGAATTGTTCTCTCCATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCACTTCTCTTCACTTTCGATCAAGATTGCCTTCACATTTCTTGTATATCCCTCCTTGATACTTGCGTATTTGGGTGAGGCTGCATTTCTCTCTAAGCACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCTGTGTTTTGGCCAGTGTTCGTCGTGGCCACTTTTGCTTCTGTCGTAGGAAGTCAGGCGGTGATTTCGGCTACATTCTCCCTTGTAAACCAGTGCTGTGCTCTAAATTGTTTCCCCCATGTGAAAACTATGCACACTTCAAATCAGATATATGGGCAGATTTATATCCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACAAACATGATAGGCCATGCATATGGGCTGGCAGTCACCATTGTTATGTTTGTCTCAACTTGCTTGATGACACTTGTGATGATAATTGTTTGGAAGCAGAGGTTGATCAATGCCATAGCATTTTTCATGTTTTTTGGGTTGATCGAACTACTTTACATCTCTGCATCAATTGTCAAAGTGCATGAAGGCGGTTGGATCCCTCTCGTGTTTTCTACTATCTTTATGTGTTCGATGTATGCATGGTACTATGGGACGATGAAGAAACACGAATACGACGATGAGAACAAAGTGTCGATGAATAGGATACTTTCTTCAGGGCCTAGCCTTGGCATAGTGCATGTGCCCGGAATTGGACTCATATACACTAATCTGGTCGCTGGTGTTCCTGCTGTTTTTGGTCACTTTGTAACCACTTTGCCTGCATTTCATCAAGTGCTTGTATTTGTTTGTATAAAATACGTTCAAGTTCCCCATATTGACGAAGAAGATCGTTTGCTCATTTCGAGGGTGGGGCCGAAAGAATGCAACATGTTTCGGTGCATTGTCCGGTATGGTTACAGGGATTTGCTACAAGAGAACTACAATTTCGAGAACAGATTGGTGTTTTCCTTGGTGCATTATGTAGAAACAGAAGATCACTTTTGGAAACCAATGACACAAGTCTCTAGAGGGTGTGAAAATTCAGAAGAACCTTGTGAATATGAACCATTGGAGCAGGCTTTTACAAGCTCAAATATGTTGCAGTCTTCTAACAAATATCAAGCAACGGATACTGCAGTCGACGACCGGGAAAAGTCTATACATAATGAGGAAGCGATGCAGATATTGAGAGCGAAAGAATCGGGAATCACATACATCTTTGGACATTGCTCAGTCAAGGCCAAGAAATCATCTTCCATTTTCAAGAAGTTAGCCATTGATATTGTGTATTCTTTTTTGAAACAAAATTGTAGAGAGCCTGAGGTTTTACTGAATGTGCCTCACACTTCTCTCTTGGAAGTAGGCATGGTATATTATGTATAG 2274 41.56 MNNPSQENVETEGISPKNVKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPVDEQLSAYDIKGISETRPSAALKSFFRLHPSFRRGFLLFVLFGACMAIGDGVLTPAISVLSAVSGVKHKITELHENYVVLISCVILVGLFSLQHRGTHKVAFMFAPIITVWLVCISVIGMYNIIKWNPSIYHALSPVYMLKFLRSTGVEGWISLGGIVLSITGVEAMFADLGHFSSLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVVGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTIVMFVSTCLMTLVMIIVWKQRLINAIAFFMFFGLIELLYISASIVKVHEGGWIPLVFSTIFMCSMYAWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVHVPGIGLIYTNLVAGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEDRLLISRVGPKECNMFRCIVRYGYRDLLQENYNFENRLVFSLVHYVETEDHFWKPMTQVSRGCENSEEPCEYEPLEQAFTSSNMLQSSNKYQATDTAVDDREKSIHNEEAMQILRAKESGITYIFGHCSVKAKKSSSIFKKLAIDIVYSFLKQNCREPEVLLNVPHTSLLEVGMVYYV 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 567795 572374 - CePI673135_03g000560.1 Cec03g0056 197680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0056 757 NCBIfam potassium uptake protein 30 757 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec03g0056 757 Pfam K+ potassium transporter C-terminal domain 532 755 IPR053952 -
Cec03g0056 757 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 757 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cec03g0056 757 Pfam K+ potassium transporter integral membrane domain 30 521 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0056 Cec-Chr3:567795 Cec05g1406 Cec-Chr5:15896246 2.50E-233 dispersed
Cec03g0056 Cec-Chr3:567795 Cec10g1456 Cec-Chr10:28900416 5.30E-228 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0056 K03549 - csv:101222845 1419.45