Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0060 ATGTCTGTCTCCGTTGCGGTTTCGAATTCGCCGGGATTTTCTCCTTCGTCTATGTTCTGCAACAAGACGTCGATCATTTCTCCGGCGCCGGAGGCGCTCACGCTTACTTTAGCCCATTTGAAGTCGTCGCAGGCTTCTTCGTCTTGCTCTTCTTCCCCTTCTTCGCCTTCTTCCCCTTTTCGGATTAGGTTTCCCAAGCCCCCTTCTGGGCTTTCGGCGGCAGCGGCAGCGGTGGCGGTGGCTTCCACTTCTTCTCCTTCGTCGTCGTCGTCAAGTGCGATCTTGAAGAGGAAGAGACCGGCTAGGTTGGATATTCCGTTGACGCCATTGAGTTTTGGGGCTCCGGTGATGCCGTCGCCATCGTCGTTCAGGGAGGTGGTGGAGGCCGAGAGAGATGGGTATTCTGTGTATTGTAAGAGAGGGAGGAGGAGAATTGCGATGGAAGATCGCTATTCTGCCGCTATTGATCTTCGAGGAAATTCCAAAGAGGGGTTTTTTGGTGTATTTGATGGACATGGAGGTGCGAAGGCTGCAGAATTTGCAGCAAATAACTTAGAGAAGAACGTTATGAATGAAATTGAAAGACTGGCTGATAATGAAACTGATTTTGAACAAGCCATTAAACATGGCTACCTCACCACAGATTCTGATTTCCTCAAGGAGGATCAACGTGGTGGTTCATGTTGTGTGACAGCCTTGATCAAGAAAGGCAACCTTGTTATCTCCAACGCCGGTGACTGCCGTGCCGTTCTCAGCAGCCAAGGTGTTGCCGAGGCCATCACCTCCGACCACCGCCCGTCTCGGGAAGATGAAAGGCGCAGGATCGAGTCCATGGGTGGATATGTTGATTTGTGCAATGGCATTTGGAGAGTCCAGGGATCTCTAGCTGTAACTAGAGCAATTGGGGATGCTCACCTCAAACAATGGGTGATAGCAGAGCCGGACACGAGGGCAATTCGGATCGAACCTCGACATGAGTTCTTGATCTTGGCCTCAGACGGATTATGGGAAACGGTGAGCAATCAAGAAGCAGTGGACATTGCACATCCGTTGTGTGTGGGGATTGAGAAGGCAGAGCCATTGATGGCCTGTAAAAAGCTTGTGGAGCTCTCACTTTCAAGAGGTTCAGTTGATGACATTAGTGTAGTGCTGATTCAATTGGCTAACTTCATCTAA 1176 50.43 MSVSVAVSNSPGFSPSSMFCNKTSIISPAPEALTLTLAHLKSSQASSSCSSSPSSPSSPFRIRFPKPPSGLSAAAAAVAVASTSSPSSSSSSAILKRKRPARLDIPLTPLSFGAPVMPSPSSFREVVEAERDGYSVYCKRGRRRIAMEDRYSAAIDLRGNSKEGFFGVFDGHGGAKAAEFAANNLEKNVMNEIERLADNETDFEQAIKHGYLTTDSDFLKEDQRGGSCCVTALIKKGNLVISNAGDCRAVLSSQGVAEAITSDHRPSREDERRRIESMGGYVDLCNGIWRVQGSLAVTRAIGDAHLKQWVIAEPDTRAIRIEPRHEFLILASDGLWETVSNQEAVDIAHPLCVGIEKAEPLMACKKLVELSLSRGSVDDISVVLIQLANFI 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 613016 614557 - CePI673135_03g000600.1 Cec03g0060 197684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0060 391 Gene3D - 134 390 IPR036457 -
Cec03g0060 391 ProSitePatterns PPM-type phosphatase domain signature. 165 173 IPR000222 GO:0043169(InterPro)
Cec03g0060 391 CDD PP2Cc 133 387 IPR001932 -
Cec03g0060 391 SMART PP2C_SIG_2 142 387 IPR001932 -
Cec03g0060 391 FunFam probable protein phosphatase 2C 25 126 390 - -
Cec03g0060 391 Pfam Protein phosphatase 2C 138 380 IPR001932 -
Cec03g0060 391 SUPERFAMILY PP2C-like 133 388 IPR036457 -
Cec03g0060 391 PANTHER PROTEIN PHOSPHATASE 121 385 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec03g0060 391 SMART PP2C_4 126 385 IPR001932 -
Cec03g0060 391 ProSiteProfiles PPM-type phosphatase domain profile. 133 387 IPR001932 -
Cec03g0060 391 Coils Coil 182 202 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0060 Cec-Chr3:613016 Cec07g0494 Cec-Chr7:5579064 2.60E-93 dispersed
Cec03g0060 Cec-Chr3:613016 Cec07g0291 Cec-Chr7:2857153 1.40E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0060 K17506 - csv:101207841 656.366