Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec03g0085 | ATGGCCAACGACGTCGTTTGCCTTTTCCCCTTACCCTCTTTCTTCCTCATTCTCATGTTCTCCTATTTCATTTGGTTTCATTTCCTCGCCCGTAAGCTCACCGGTCCGCCCGTATGGCCACTCATCGGCAGCCTTCCGGCTCTCATCTCGAACCGGCGGCGACTCCACGACTGGATGGCCGGCAACCTCCGCGCCACAGGCGGCGCCGCCACTTACCAAACCTGCACGGTGGCCCTTCCATTCATAGCTAAAAAACAAGGATTTTACACGGTCACGTGCCACCCGAGAAACATCGAGCACGTGCTCCGAACCCGGTTCGAAAATTACCCGAAAGGACCGGACTGGCAAGCGGCTTTTCACGATTTATTAGGGCAAGGGATTTTCAACAGCGACGGAGAAATTTGGCTGATTCAACGGAAGACGGCGGCGCTTGAATTCACGACGAGGACTCTCCGGCAGGCGATGGACCGGTGGGTGAATCGGACGATACGGACGCGACTGTGGTGTATATTGGAGAAGGCGGCGGAGTACAAAACGGCGGTGGATTTGCAGGATTTGTTGCTCCGATTAACATTTGATAATATTTGTGGGCTGACTTTTGGGAAAGATCCACAAACTTTGTCGCCGGAATTGCCTGCGAATCCGTTTGCTTTGGCATTTGATACCGCCACTGAGGCCACTCTTCAGCGGCTTCTTTACCCTGGTCTTTTATGGAGGTTGGAGAAGCTTCTGGGCATTGGAATGGAAAGAAGGTTGAAGAAGAGTTTGAAAGTAGTAGAAGAATACATAAACGACGCCGTTGCAGCCCGTAAACAATCTCCCTCCGACGACTTATTATCACGCTTCATGAAGAAACGCGACGGCGACCGCTTCTCCGCCGCCGTCCTCCACCGCATCGCATTAAACTTCGTCCTCGCCGGCCGAGATACCTCCTCCGTGGCTCTCACGTGGTTCTTTTGGCTAGTAATGAACCACCCACACGTAGAGGAAAAAATCATCTCCGAAATCTCAACGGTCCTCCGCCAGACACGTGGCGACGACCCACGCCGTTGGATCGAAGAACCGTTGGTATTCGACGAAGCCGACAAATTAGTGTACTTAAAAGCCGCGTTGGCCGAAACGCTGCGTTTATACCCTTCCGTACCGCAGGATTTCAAGTATGTCGTGGCTGATGACGTGTTGCCAGATGGCACTTTTGTGCCAGCTGGTTCAACCGTGACGTATTCGATTTATTCGGTCGGGAGGATGAAGAGCATTTGGGGGGAGGATTGTGCGGAGTTTAAACCGGACCGGTGGTTGTCTCCCGCCGGGGACCGGTTCGAGGGGCCAAAGGATGCCTACAAATTTGTGGCGTTTAATGCTGGACCGAGGACTTGTTTGGGGAAGGATTTGGCTTATTTGCAAATGAAGTCCGTTGCCTCCGCCGTACTCCTCCGGTACCGGCTAGCGCCGGTTCCCGGTCACCGGGTGGAACAGAAAATGTCTCTTACACTTTTTATGAAGAACGGGCTTCGTGTTTATTTGCATCCTCGCCGGCTTGCCTAG | 1545 | 53.2 | MANDVVCLFPLPSFFLILMFSYFIWFHFLARKLTGPPVWPLIGSLPALISNRRRLHDWMAGNLRATGGAATYQTCTVALPFIAKKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILEKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPELPANPFALAFDTATEATLQRLLYPGLLWRLEKLLGIGMERRLKKSLKVVEEYINDAVAARKQSPSDDLLSRFMKKRDGDRFSAAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEEKIISEISTVLRQTRGDDPRRWIEEPLVFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCAEFKPDRWLSPAGDRFEGPKDAYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLA | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 873103 | 875747 | - | CePI673135_03g000850.1 | Cec03g0085 | 197709 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec03g0085 | 514 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec03g0085 | 514 | FunFam | Cytochrome P450 | 27 | 514 | - | - | |
| Cec03g0085 | 514 | Pfam | Cytochrome P450 | 90 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | Gene3D | Cytochrome P450 | 29 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | SUPERFAMILY | Cytochrome P450 | 24 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0085 | 514 | CDD | CYP86A | 75 | 504 | - | - | |
| Cec03g0085 | 514 | PANTHER | CYTOCHROME P450 | 24 | 504 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec01g0252 | Cec-Chr1:2514860 | Cec03g0085 | Cec-Chr3:873103 | 5.10E-193 | dispersed | |
| Cec03g0085 | Cec-Chr3:873103 | Cec09g0449 | Cec-Chr9:3825796 | 5.40E-123 | dispersed | |
| Cec03g0085 | Cec-Chr3:873103 | Cec06g0377 | Cec-Chr6:4278537 | 1.20E-194 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec03g0085 | K15401 | - | csv:101214516 | 990.719 |