Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0115 ATGGGGGAGGAGGAAGTGCCCATTTTGAAAACAGAACATTGGCATGAACTTAAGACGCCAGTAGCTGCTAAGAAGAAGGATGTTTCTATTCCCAATTCCCCAGGGTCAGAAGCAAAACGTTGCAGTTCTGGCTGTGCTTTTTCCAGATTGGAACACAGTAATATGGAGTCATTAAAACGCTCTAAATCAGCTATGAAGCTTGGTGGATTGATATTGTTTTATACCATAGCTATGGCAGTAGAGACTATTGGTGGTTTGAGAGCTAACAGTCTAGCTGTAATGACAGATGCAGCCCACTTGCTTAGTGATGTTGCTGGTTTCTCTGTTTCCCTCTTTGCAGTTTGCGTTTCGGGCTGGGAGGCAACACTGCAACATTCATTCGGGTATTACCGTCTTGAAGTTTTAGGTGCCCTTGTGTCTGTTCAGCTTATATGGCTGATTTCTGGGATCTTAATCTACGAGGCGATCGACCGGATTCTTAGCCAAAAGACTAAGGTGGATGGTTTCCTTATGTTTGCCATTGCAGCTTTTGGATTCACTCTTAACTTGTTTATGGTCATGTGGCTTGGCCATAGCCACCACTCTCATTCATCTCATTGTTGTCATGATCATCATGATCATCACTCTCACTCTCATCAGAATCACTTGGATCATGAACCTGACCATAAGGAGGAGGAGATTTTCACAGCAACCAAACAAGAGGGTGCTTCTTTGGGGTCAAAGGACAATAGTTCAATGTTGAACATAAATCTCCAAGGTGCTTATCTTCATGTCATTACTGATATGATTCAATCTATTGGTGTGATGATTTCTGGAGTCATTCTATGGTTTAAACCCGACTGGATCGTCGTCGATTTAATCTGCACTCTTGTATTTTCTGTTCTTGCTTTAGCTACTACTTTCTCTATGCTTAGACGTATAGCTGGTATATTGATGGAAGGAACACCTAGGGAGATCAATATTGAGAGCCTGGAAAATGAGCTCAAGGACATAAAAGGAGTCCATTATTTGCATGACTTGCACGTTTGGTCCATAACGGCCGGAAAAGTCGTGTTGTCGTGCCATGTTGTCGCCGAAGCCGGAGTTTGTTCTAGGGAGCTAATTTTGAATATTAGAAGCCTTTGTGAAGACAGATACAATATAGTTCATACTACCATACAAGTTGAGTAG 1170 42.31 MGEEEVPILKTEHWHELKTPVAAKKKDVSIPNSPGSEAKRCSSGCAFSRLEHSNMESLKRSKSAMKLGGLILFYTIAMAVETIGGLRANSLAVMTDAAHLLSDVAGFSVSLFAVCVSGWEATLQHSFGYYRLEVLGALVSVQLIWLISGILIYEAIDRILSQKTKVDGFLMFAIAAFGFTLNLFMVMWLGHSHHSHSSHCCHDHHDHHSHSHQNHLDHEPDHKEEEIFTATKQEGASLGSKDNSSMLNINLQGAYLHVITDMIQSIGVMISGVILWFKPDWIVVDLICTLVFSVLALATTFSMLRRIAGILMEGTPREINIESLENELKDIKGVHYLHDLHVWSITAGKVVLSCHVVAEAGVCSRELILNIRSLCEDRYNIVHTTIQVE 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1145897 1147066 - CePI673135_03g001150.1 Cec03g0115 197739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0115 389 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 25 389 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Cec03g0115 389 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 318 389 IPR036837 -
Cec03g0115 389 Pfam Cation efflux family 71 312 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec03g0115 389 Gene3D Cation efflux protein transmembrane domain 67 311 IPR027469 -
Cec03g0115 389 SUPERFAMILY Cation efflux protein transmembrane domain-like 68 313 IPR027469 -
Cec03g0115 389 NCBIfam cation diffusion facilitator family transporter 71 389 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0115 Cec-Chr3:1145897 Cec06g0093 Cec-Chr6:862250 8.10E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0115 K14689 - csv:116403740 603.979