Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec03g0129 | ATGGGTTGGCCTTATATAGGCGAAACCTTCAAACTCTACACCCAAAACCCAAACTCTTTTTTCTCCATTAGGCAAAAAAGATATGGGGATGTTTTTAAGACACATATATTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAAAGGCTGCAAGAGTTGTGCTTGTGAGTAAGGCTCATCTGTTCAAGCCAACTTATCCACCAAGCAAAGAGAAAATGATAGGTCCTCAAGCTTTGTTCTTCCATCAAGGCCCGTACCATGCTCACCTTAAGAAGTTGATTCAAGCTTCCTTTTTGCCATCTGCTATTAAAGGCTCTATCTCTCAAATTGAGAACATTGTCCTCCACCTTCTCCTCTCTTGGAATAACTCCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGCAATGATATCAGCTTTTGGAGACCAACAAGACTTGGAAATTGAAAGAATCAAACATTTGTACCAATGCCTTGAAAAAGGCTACAATTCTATGCCTCTCGATCTTCCCGGAACTCCTTTCCGCAAAGCAATGAAGGCGAGGAAGGTGCTGAGTGAGACATTGGGGAAATTGATAGAGAAGAGACGGCGGAGCAAAGAGCATGGAGGTGGGTTGCTGGCGGTGCTACTGGGCGGCGGTGGAGAAGAGGCAGAGGATGAGAAAAAGAAGCTGAGTGATTCACAAATAGCAGATAATATAATAGGAGTAATATTTGCGGCACAAGACACGACAGCTAGTGTTTTAACATGGATTCTTAAGTACTTACACGACAATCACCATCTTCTCCAAGCTGTTCAGAAGGAGCAAGAGGCAATTTTTCAAAGGAAAGTGTGCGAAGGAAACCGTGGCCTTTCGTGGGATGATACGAGGCGCATGCCCTTCACTAGTCGGGTGATCCTAGAAACTCTAAGAAGAGCAAGTGTTGTGTCATTCACATTCAGGGAAGCAGTAGAAGAGGTTGAATTTGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCACTCTTCAGAACCATTCATCACTCTCCTGATTTCTTCCCACACCCTGAGAACTTTGATCCTTCAAGATTCGAGGTGCCACCTAGACCGAACACGTATATGCCATTTGGCAATGGAGTGCACTCGTGTCCAGGCAGTGAGATGGCTAAGCTTGAAATGCTTGTTCTTCTCCACCACCTCACCACCACTTACAGATGGAAAGTGGTGGGAGAGGAATCTGGAATACAATACGGTCCATTTCCTGTACCTAAAGGCAGGCCCTCCTCTCCTCTCTTTGAAGTACCCACGAGAATTCCACGTTGTGGTGTGTCAGGGCACCAAAATTGTAGGGCTGACTGGATTATTAACGATGGCCAGCATTCAGTTTAA | 1383 | 44.54 | MGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPKAARVVLVSKAHLFKPTYPPSKEKMIGPQALFFHQGPYHAHLKKLIQASFLPSAIKGSISQIENIVLHLLLSWNNSQINTLQQMKRFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKVLSETLGKLIEKRRRSKEHGGGLLAVLLGGGGEEAEDEKKKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNHHLLQAVQKEQEAIFQRKVCEGNRGLSWDDTRRMPFTSRVILETLRRASVVSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSPDFFPHPENFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRWKVVGEESGIQYGPFPVPKGRPSSPLFEVPTRIPRCGVSGHQNCRADWIINDGQHSV | 460 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1245384 | 1256323 | - | CePI673135_03g001290.1 | Cec03g0129 | 197753 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec03g0129 | 460 | PRINTS | P450 superfamily signature | 301 | 312 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | P450 superfamily signature | 372 | 381 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | P450 superfamily signature | 243 | 260 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | Gene3D | Cytochrome P450 | 1 | 427 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | Pfam | Cytochrome P450 | 3 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | FunFam | Abscisic acid 8 | 1 | 428 | - | - | |
| Cec03g0129 | 460 | CDD | CYP90-like | 24 | 422 | - | - | |
| Cec03g0129 | 460 | SUPERFAMILY | Cytochrome P450 | 2 | 421 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PANTHER | CYTOCHROME P450 26 | 1 | 414 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cec03g0129 | 460 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 374 | 383 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec03g0129 | 460 | PRINTS | E-class P450 group I signature | 381 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | E-class P450 group I signature | 300 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | E-class P450 group I signature | 371 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | E-class P450 group I signature | 232 | 249 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | E-class P450 group I signature | 252 | 278 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | E-class P450 group I signature | 340 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec03g0129 | 460 | PRINTS | E-class P450 group I signature | 25 | 44 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec03g0129 | Cec-Chr3:1245384 | Cec07g1207 | Cec-Chr7:27580960 | 1.00E-149 | dispersed | |
| Cec03g0129 | Cec-Chr3:1245384 | Cec05g2206 | Cec-Chr5:33599242 | 6.10E-142 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec03g0129 | K09843 | - | csv:101216531 | 795.038 |