Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0134 ATGGATAATCTCCTTGAAGATTTTCCCAATTCCTGGAATAATTATCACTTCTATCCCCATCTCTCTAATGGCTTGTTCAAAGTCAATCGCGAATCCGTTGATCCCCTTCAAATTCCGGCCAAATCCCAGCAGCATCAGCACCAACTCAGTAATAATTCCTCTTCTTCGCCGTCGTCGTCGAGCTCCGAAGGTGACTCGCCTGACAGCCATGACACTTCCAATACGATGCTCAAATACATCACCGAGATGCTGATGGATGAAGGAGAAGATCTCAAAACACAGCCCTGTATGCTTCTTGACTGTTTGGCTCTTCAAGCTGCTGAGAAATCTTTTTATGATGTTCTTGGCCAGAAGTATCCCCCTTCTCCAATCGGAAATGGCGATTCTTCTCAGGATTTCAGCTGTGATAGGGCTGTGAGTAATAACGGTGAAGATGAATCGGAATCCTTATATGGTAACTCCTCTGTTTTTGCCCCTTTTCAAAACTCTCTTTTGAATCAAGATTCGTTTCTTGGGATGCAATTTATTGGGCATTTTAGGCAAGGAGCTGAAGAGGCTAGCAAGTTTCTTCCTGTTAATGGAAGATTTGGAACCATTGACTTGGATAATGATTCTTCTACCTCTCTTCCCTCTAGGGCTGTTGATTTTTCTTGGGTTGGTGCTGAAAATGATGGTAGATCCAGCCTTGAAAATGGGTTATTAAGAGAGAAGAAAAACCGTCTTAGGGACGATAGTGATGAGGAGTTGAGAAGTAGTAAACAATCTGCTAACTTTGCCGATGATAATTCACTGTCTGATTTGTTTGATGAGGTTCTTCTTTGTCGGGGTGAGAGTCGGCAGTCCCCATCGTGTGGTTCCGATGAATCGTCGGAGAGTGAAGCAAATAAGAAGTCGAGAGGGAGAGGGAAAAGGAAAGGGAAGAAGACCACTCGTTCTAGGAAGCAAGAGAATAGTGTGGGAGTTGTGGATTTGTGGACATTGTTGACTCAATGTGCTCAGGCTGTTTCAAATTATGATCAAAGGACTGCAAATGAGTTGCTAAATCAGATTAGGCAGCATTCTAATCCATCTGGGGATGGAAATCAGAGATTAGCTCATTACTTTGCCAAGGGTCTCGAGACTCGGCTCGCTGCCGGGACGCCTCTGTATTTGCCCTTTGCAAGTAATGAAACCTCTGCTGCTGAGATCTTGAAAGCTTATCAGATGTTCATCAAGGCTTGCCCGTTTCGGCGGATGTCGTATTTCTATGCCAATAGAACGATTCTGAAGCTAGCCGAGAAAGTAACAACTTTGCATATTGTTGATTTTGGTATTTTGTATGGTCTCCAATGGCCTTGCTTGATTCAACGGCTCTCGCGTAGACCTGGTGGACCTCCCAAACTTCGGATCACGGGGATTGAGCTTCCCCAGCCGGGATTCCGACCTGCTGAACGTGTTGAGCAGACTGGCCGTCGCCTTGCACATTACTGCAAGAGATTCAATGTGCCATTTGAACACAAGGTCTTGGCACAGAAATGGGAAACGGTTCGATATGAGGATCTCAATCTTGATAGAGATGAACTGACTATTGTGACTTGTATGTTTCGAATGAAGAACGTACCCGACGAAACGGTGGTCGCAAACAGCCCAAGAGACAGGGTTCTAAAGTTAATCAGGAAAATCAACCCAGATCTCTTCATTCATGAAGTCACCAATGGCTCATTCAATACTCCATTCTTCAACACAAGGTTTAAGGAAGCACTCTTTTACTACTCATCGTTATTCGACATGTACGAGGCAACTGTACCTCGAGACAATCCGCAGAGGCATCTTTGTGAGAAGGAAATCCTAGGAAGAGACATCATGAATGTCATAGCGTGCGAGGGGCTCGAGAGAGTCGAAAGGCCAGAGACTTACAAGCAATGGCAAGTAAGGAACACGAGGGCTGGGTTCAAACAAGTACCATTAGACCAAGATCTGCTGAAGAGTGTGGAGAAGATAGTGAACACAGAATACCATCAGGACTTCGTGATCGATCAGGATGGGTCGTGGATGTTGCAAGGGTGGAAGGGACGGATCATCGACGCGTTATCGTGCTGGGTAGTTGCCTAA 2091 45.29 MDNLLEDFPNSWNNYHFYPHLSNGLFKVNRESVDPLQIPAKSQQHQHQLSNNSSSSPSSSSSEGDSPDSHDTSNTMLKYITEMLMDEGEDLKTQPCMLLDCLALQAAEKSFYDVLGQKYPPSPIGNGDSSQDFSCDRAVSNNGEDESESLYGNSSVFAPFQNSLLNQDSFLGMQFIGHFRQGAEEASKFLPVNGRFGTIDLDNDSSTSLPSRAVDFSWVGAENDGRSSLENGLLREKKNRLRDDSDEELRSSKQSANFADDNSLSDLFDEVLLCRGESRQSPSCGSDESSESEANKKSRGRGKRKGKKTTRSRKQENSVGVVDLWTLLTQCAQAVSNYDQRTANELLNQIRQHSNPSGDGNQRLAHYFAKGLETRLAAGTPLYLPFASNETSAAEILKAYQMFIKACPFRRMSYFYANRTILKLAEKVTTLHIVDFGILYGLQWPCLIQRLSRRPGGPPKLRITGIELPQPGFRPAERVEQTGRRLAHYCKRFNVPFEHKVLAQKWETVRYEDLNLDRDELTIVTCMFRMKNVPDETVVANSPRDRVLKLIRKINPDLFIHEVTNGSFNTPFFNTRFKEALFYYSSLFDMYEATVPRDNPQRHLCEKEILGRDIMNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQDLLKSVEKIVNTEYHQDFVIDQDGSWMLQGWKGRIIDALSCWVVA 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1305707 1307797 - CePI673135_03g001340.1 Cec03g0134 197758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0134 696 MobiDBLite consensus disorder prediction 123 150 - -
Cec03g0134 696 MobiDBLite consensus disorder prediction 278 315 - -
Cec03g0134 696 Pfam GRAS domain family 326 693 IPR005202 -
Cec03g0134 696 MobiDBLite consensus disorder prediction 39 73 - -
Cec03g0134 696 MobiDBLite consensus disorder prediction 122 150 - -
Cec03g0134 696 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 298 693 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cec03g0134 696 ProSiteProfiles GRAS family profile. 315 694 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0134 Cec-Chr3:1305707 Cec05g1316 Cec-Chr5:13433811 2.00E-43 dispersed
Cec02g0168 Cec-Chr2:1648511 Cec03g0134 Cec-Chr3:1305707 8.30E-32 transposed
Cec04g1435 Cec-Chr4:33961740 Cec03g0134 Cec-Chr3:1305707 8.10E-33 transposed
Cec04g1847 Cec-Chr4:37109263 Cec03g0134 Cec-Chr3:1305707 2.40E-52 transposed
Cec05g2301 Cec-Chr5:34292711 Cec03g0134 Cec-Chr3:1305707 2.60E-42 transposed
Cec06g1212 Cec-Chr6:24818758 Cec03g0134 Cec-Chr3:1305707 2.30E-44 transposed
Cec09g0094 Cec-Chr9:802652 Cec03g0134 Cec-Chr3:1305707 2.10E-16 transposed
Cec09g0966 Cec-Chr9:9239198 Cec03g0134 Cec-Chr3:1305707 1.40E-55 transposed
Cec10g0453 Cec-Chr10:5397401 Cec03g0134 Cec-Chr3:1305707 1.10E-57 transposed
Cec10g2124 Cec-Chr10:35838549 Cec03g0134 Cec-Chr3:1305707 7.10E-151 wgd
Cec02g2110 Cec-Chr2:38678140 Cec03g0134 Cec-Chr3:1305707 3.30E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29165 PF03514 GRAS 4.20E-115 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0134 K27753 - csv:101217374 1227.62