Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0158 ATGGATTTCTCTTCTGTTCCACTCTATTTAGATCCTCCTCCCAATTGGCACCAGCAATCAAATCATCATCATCACCACCATCCTCAGATAAGTAGTAATAATAATGGATCTCCACAACACCAACACCACCTTCTTTCATTGCCTACTCAACAACTCTCCACTGCACCGTTGTCTCATGTCGTTGGTGGCGGTGGTGTTAGCTCAATCCGGCGTGGTTCGATGGCGGACCGAGCTCGGATGGCTAACGTACCACTACCGGAGACGGCACTCAAGTGTCCTCGATGTGATTCAACCAACACGAAGTTTTGTTACTTTAATAACTATAGTCTCTCTCAGCCTCGCCACTTTTGTAAGAGCTGCCGCCGATATTGGACTCGTGGGGGTGCCCTAAGGAACGTTCCCGTTGGGGGCGGTTGTCGCCGGAATAAGAAGAATAAAACTAGACGCTCGAAGTCTCCGGCTGCAGCTCCGGCCGGAAATGAAACTCAAGTGATGAATAACAATTCAAACTCACCCACCACTACTACAATACCCTTGCACAGTAGTGCTGAGAATATTATTGGTCATTTACAGCCTCAACATCCTCACCTTTCATTCATGGCTTCATTGAATAATTTTTCTCGATACGGGACAACGAGTTTAGGGTTGAATTTCAACGAGATCCAGGCTCAAGGTAACGATATCGGCAACGGCGCCCTTCTGAATCATCATCTGTGGCGTGGTTCCCAAAACTTTCCTCTCTCAGGTTTCCTAGAAACCCCACCCGGGTTGTACCCGTTTCAAATTAGCGGCGGGGACGGCGACGACAACACAACAAATTCAATCCTAACACCAAATTCAAGGGAAACCCATTTGCCTCCAGTGAAGATTGAAGAAACCCAAGTGCTGAATTTGTTGAAATCATCCAATTTGGGTATCAATAATTCTGAAAACAATCAATTTTGGAGCAATGGAAATGAAGCCCCTATTGATCAGATCATCATCTTCAAATTGGCATCTCTCAGCTCACAGCTTTGTAGCACTCTTCTAGCTCTCTTCAGCCTCTGA 1047 46.23 MDFSSVPLYLDPPPNWHQQSNHHHHHHPQISSNNNGSPQHQHHLLSLPTQQLSTAPLSHVVGGGGVSSIRRGSMADRARMANVPLPETALKCPRCDSTNTKFCYFNNYSLSQPRHFCKSCRRYWTRGGALRNVPVGGGCRRNKKNKTRRSKSPAAAPAGNETQVMNNNSNSPTTTTIPLHSSAENIIGHLQPQHPHLSFMASLNNFSRYGTTSLGLNFNEIQAQGNDIGNGALLNHHLWRGSQNFPLSGFLETPPGLYPFQISGGDGDDNTTNSILTPNSRETHLPPVKIEETQVLNLLKSSNLGINNSENNQFWSNGNEAPIDQIIIFKLASLSSQLCSTLLALFSL 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1557615 1559100 + CePI673135_03g001580.1 Cec03g0158 197782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0158 348 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 83 202 IPR045174 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec03g0158 348 Pfam Dof domain, zinc finger 89 144 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec03g0158 348 ProSitePatterns Zinc finger Dof-type signature. 92 128 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec03g0158 348 MobiDBLite consensus disorder prediction 156 171 - -
Cec03g0158 348 ProSiteProfiles Zinc finger Dof-type profile. 90 144 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec03g0158 348 MobiDBLite consensus disorder prediction 135 171 - -
Cec03g0158 348 MobiDBLite consensus disorder prediction 12 42 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1699 Cec-Chr1:31648574 Cec03g0158 Cec-Chr3:1557615 3.10E-23 dispersed
Cec03g0158 Cec-Chr3:1557615 Cec07g0366 Cec-Chr7:3608955 9.20E-42 dispersed
Cec10g2109 Cec-Chr10:35744102 Cec03g0158 Cec-Chr3:1557615 3.40E-41 wgd
Cec02g2134 Cec-Chr2:38881337 Cec03g0158 Cec-Chr3:1557615 1.00E-37 wgd
Cec03g0158 Cec-Chr3:1557615 Cec04g0967 Cec-Chr4:29333086 4.40E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29166 PF02701 zf-Dof 1.50E-32 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0158 - - - 0.0