Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0162 ATGGCGAAAACCCTAATTTCATCTTCACCCTTCGTCGGTTCTTCTCTCCCATCTCTCTCTCGCCATGCTCGTCTCCACACTCTTCGTCACCGGAGACACGTCGCCACCAGAGTCAATTTCAGCTTCCATCAACTTCCCCCCATCCATACCTTTGATTCTGCCTTCGATTTTCAAGCAGTTGTTAGCAGAGCCGAAGGCCTGCTCTATACACTTGCTGACGCAGCGGTTGCAGTGGATTCCACTGTTTCAGGTGGCGCCGCATCCACTTCCGCTGATACCGCGGTGCAGAAGAATGGCGGATGGTTTGGATTTATCTCCGAGGCCATGGAAGTGGTTCTTAAAGTGTTGAAGGATGGACTTGCGGCTGTGCACGTCCCATATTCATATGGATTTGCAATTATTTTACTTACTGTTATCGTTAAAGTTGCAACTTTTCCCCTCACTAAGCAGCAGGTTGAGTCAACATTGGCCATGCAAAATCTTCAACCGAAGATTAAAGCCATCCAACAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACATCACGACTTTATAGACAAGCAGGAGTTAATCCTTTGGCAGGTTGTTTCCCAACTTTAGCCACCATACCTGTCTGGATTGGCCTATATCAGGCCCTTTCTAATGTGGCAAATGAGGGATTATTGACTGAAGGTTTCTTTTGGATCCCCTCTCTTGGTGGTCCAACTACTATTGCTGCTCGACAAAGTGGATCTGGAATTTCTTGGTTGTTTCCTTTTGTGGATGGCCATCCACCATTGGGCTGGTCTGACACTGCAGCATACCTTGTATTACCTGTTCTCCTCGTCATATCTCAGTATGTATCGATGGAACTCATGAAGCCTCCCCAGACTGATGATCCAGCACAAAAGAACACACTCCTTATTTTCAAGTTTCTTCCCCTCATGATCGGTTACTTCTCCTTGTCTGTTCCATCAGGATTATCAATTTACTGGTTCACAAACAATGTTCTCAGCACGGCTCAGCAAGTATGGTTACGCAAGTTAGGAGGTGCAAAGCCTGTTGTAAGTGAGGATGCTGCTGGAATCATAACAGCTGGACGTGCCAAACGAACATCTGAATCAGGAAGAAACGGTGACAGGTTTAGGCAGTTAAGGGAAGATGAGAAGAAGAATAAGTTAAGCAAGGCAGCTCGATCAGAAGAGATTCAAACTTTGGCTTCTGAGTCTGATAATGAGGATGGGTATGATAGGGAGACAATTGAGAAGGGTGAGGACAGTCTAGAAGAGGCATATGCATCAAGTGCAGACAAAGACATCCCAGCCTATAATCGACAAAAGAGAAGCAAACGATCAAAGAGGAAACGTGCAGGAGGCTTAGCCTCTTCTTTAATTGGTGGTTCACTGTTTTGTGAGAAGTTCATATCGATATCTAACGTCCTGATTTGTTGTGGCTTGACACGCCTTAACGATCACGATGTTTCTGAATTTACCGACACGGCTTACTTGTCTAAGAAGGTGAGAAATATGGTGCATGAAAGGAAAATCAGTTTAAATAGCCTTGAGGAATACAAAAAGAGATGGACAGCCAAAACGCCTGCTTTGGTCATTCATTTCCTTGATGGAGGCCGATGA 1620 45.12 MAKTLISSSPFVGSSLPSLSRHARLHTLRHRRHVATRVNFSFHQLPPIHTFDSAFDFQAVVSRAEGLLYTLADAAVAVDSTVSGGAASTSADTAVQKNGGWFGFISEAMEVVLKVLKDGLAAVHVPYSYGFAIILLTVIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWSDTAAYLVLPVLLVISQYVSMELMKPPQTDDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVSEDAAGIITAGRAKRTSESGRNGDRFRQLREDEKKNKLSKAARSEEIQTLASESDNEDGYDRETIEKGEDSLEEAYASSADKDIPAYNRQKRSKRSKRKRAGGLASSLIGGSLFCEKFISISNVLICCGLTRLNDHDVSEFTDTAYLSKKVRNMVHERKISLNSLEEYKKRWTAKTPALVIHFLDGGR 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1604548 1609523 + CePI673135_03g001620.1 Cec03g0162 197786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0162 539 PANTHER OXA1 34 386 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Cec03g0162 539 MobiDBLite consensus disorder prediction 361 413 - -
Cec03g0162 539 MobiDBLite consensus disorder prediction 368 393 - -
Cec03g0162 539 Pfam 60Kd inner membrane protein 129 343 IPR028055 -
Cec03g0162 539 NCBIfam membrane protein insertase YidC 128 342 IPR028055 -
Cec03g0162 539 CDD 5TM_YidC_Alb3 130 343 IPR047196 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0162 Cec-Chr3:1604548 Cec08g1809 Cec-Chr8:29091193 3.40E-120 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0162 K03217 - csv:101217620 774.237