Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0208 | ATGAACACCCTTCCGGCGAAAATGGTTGAGAGTCTCTCTTTAATCAGAACCTTTGCGACTTTTCCCTCTTCTCACCGAGGTTCTCCCAATTATGGGCTAGTTTCGTTCTTCCAACAAAATAGAGGATCAAGGTTGAGTTTTCCTAAAACGACATGGAGCTTGGAAAAATGTAGTATGCGCGTCGAGAATTGTTTGCAAGCACTTCGTCCTGCCTCTGAAGCTTTTGCTCAAGAGGCTACAGATGCTCTTAAAGCTGGGAAGGTTATTGCTGTCCCTACTGATACTCTCTATGGACTCGCTTGTGATGCTTGTTCTTCTGAAGCAGTCCATAGGATTTATGAAATTAAAGGACGTAAACTTACAAGTCCTCTCGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGTTTTGCTGTGACAGACCATTTGCCTTCTGGTTTGCTTGATTCTCTCCTTCCTGGGCCTGTAACTGTTGTACTAAAAAGAGGTGAGGCGAGTATTCTTGAGAAGTCTTTGAACCCTGGATTGGACAGTATAGGAGTTCGTGTACCCGATGCTGACTTTATTAGACTGATTTCTCGTAGATCAGAGACAGCATTGGCCCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGTGTTTGCGTTAATGACTTTGAAAACCTATGGCAACACTGTGCTTATGTATACGACGGTGGCGTTCTTCCTGCTGGACGAGCAGGCTCGACTATCATTGACCTCACCAAGCGTGGCACATATAAGATTCTCAGAGCTGGAAGTGCAAAGGAGCAGACTGTTGCAACACTTGAAAGACCCAACAACAAGAATATGGAGAATGATTCTTCTGCTATGGAAATCAAAGGCCTTCCCACTTACGACGGCAAATACTTACTCTACAATGTTCTCGGCAACTTCTTCGAGGTCTCTGCCAAGTACTCCCCTTCAATTCAACCTGTTGGACGCGGTGCTTACGGCATTGTTTGTTGTACGACCAATTCTGAGACGAAAGAAGAGGTAGCGATTAAGAAGATTGGGAATGCTTTTGATAATAGGATTGATGCCAAGAGGACCCTTCGTGAGATTAAACTCCTTTGCCATATGGATCATGACAATATTATAAAAATCAAAGATATAATTCCTCCACCAGAGAAGGAGAAATTCAATGATGTGTATATTGTGTATGAATTAATGGACACTGACCTGCACCAGATCATACGCTCTACCCAGGCTCTGACAGACGATCACTGTCAGTACTTCTTATACCAATTACTGCGAGGTTTGAAGTATTTACACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAAGCAACTTGCTTCTTAATGCAAATTGTGACCTCAAGATTTGTGATTTTGGGTTAGCAAGAACAACATCAGAGACAGATTTCATGACAGAATATGTTGTAACACGATGGTATCGAGCCCCTGAGCTACTACTCAACACTTCTGAATACACAGCAGCAATAGATATTTGGTCGGTTGGATGTATTCTCATGGAAATTCTTAGGAGGGAGCCACTGTTCCCTGGTAAAGACTATGTGCAGCAATTGGGGCTTATAACTGTGTTGCTAGGTTCACCAGATGACTCAGATCTTGGGTTTCTTAGAAGTGATAATGCAAGGAAGTATGTTAAGCAACTTCCTTATTTCCCGAAACAACCGCTAACCGAAAAGTTCCCAGATCTTCCTCCACTAGCAGTTGATCTTGCAGAGAGGATGCTGCTCTTTGATCCAAGCAAGAGAATAACTGTCGAGGAGGCGATGATTCACCCATATATAGTAAGTCTTCATGAAATCAATGAAGAACCAACCTGCCCTTCTCCTTTCAACTTCGATTTCGAACAAGCATCCTTGGATGAAGAAGACATAAAAGAGCTTATATGGAGGGAGTCTCTCAATTTCAATCCAAATCACATTTAG | 1938 | 42.67 | MNTLPAKMVESLSLIRTFATFPSSHRGSPNYGLVSFFQQNRGSRLSFPKTTWSLEKCSMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGEASILEKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGVLPAGRAGSTIIDLTKRGTYKILRAGSAKEQTVATLERPNNKNMENDSSAMEIKGLPTYDGKYLLYNVLGNFFEVSAKYSPSIQPVGRGAYGIVCCTTNSETKEEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNIIKIKDIIPPPEKEKFNDVYIVYELMDTDLHQIIRSTQALTDDHCQYFLYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNTSEYTAAIDIWSVGCILMEILRREPLFPGKDYVQQLGLITVLLGSPDDSDLGFLRSDNARKYVKQLPYFPKQPLTEKFPDLPPLAVDLAERMLLFDPSKRITVEEAMIHPYIVSLHEINEEPTCPSPFNFDFEQASLDEEDIKELIWRESLNFNPNHI | 645 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2185387 | 2197502 | + | CePI673135_03g002080.1 | Cec03g0208 | 197832 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0208 | 645 | NCBIfam | L-threonylcarbamoyladenylate synthase | 75 | 265 | IPR006070 | GO:0003725(InterPro) | |
Cec03g0208 | 645 | CDD | STKc_TEY_MAPK | 306 | 642 | - | - | |
Cec03g0208 | 645 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 306 | 636 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Cec03g0208 | 645 | Gene3D | Phosphorylase Kinase; domain 1 | 296 | 636 | - | - | |
Cec03g0208 | 645 | ProSitePatterns | MAP kinase signature. | 348 | 451 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0208 | 645 | FunFam | Mitogen-activated protein kinase | 397 | 626 | - | - | |
Cec03g0208 | 645 | FunFam | Mitogen-activated protein kinase | 298 | 407 | - | - | |
Cec03g0208 | 645 | Gene3D | Transferase(Phosphotransferase) domain 1 | 397 | 626 | - | - | |
Cec03g0208 | 645 | ProSiteProfiles | Protein kinase domain profile. | 313 | 599 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0208 | 645 | Pfam | Telomere recombination | 82 | 259 | IPR006070 | GO:0003725(InterPro) | |
Cec03g0208 | 645 | SUPERFAMILY | YrdC/RibB | 75 | 264 | IPR017945 | - | |
Cec03g0208 | 645 | SMART | serkin_6 | 313 | 599 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0208 | 645 | ProSiteProfiles | YrdC-like domain profile. | 73 | 261 | IPR006070 | GO:0003725(InterPro) | |
Cec03g0208 | 645 | SUPERFAMILY | Protein kinase-like (PK-like) | 316 | 605 | IPR011009 | - | |
Cec03g0208 | 645 | Gene3D | DHBP synthase | 66 | 270 | - | - | |
Cec03g0208 | 645 | FunFam | YrdC N6-threonylcarbamoyltransferase domain containing | 66 | 269 | - | - | |
Cec03g0208 | 645 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 435 | 447 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g0208 | 645 | Pfam | Protein kinase domain | 317 | 599 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0208 | 645 | ProSitePatterns | Protein kinases ATP-binding region signature. | 319 | 343 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0232 | Cec-Chr1:2316600 | Cec03g0208 | Cec-Chr3:2185387 | 6.30E-169 | dispersed | |
Cec03g0208 | Cec-Chr3:2185387 | Cec06g0355 | Cec-Chr6:4074134 | 7.20E-165 | dispersed | |
Cec03g0201 | Cec-Chr3:2093094 | Cec03g0208 | Cec-Chr3:2185387 | 1.60E-148 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71805 | PF00069 | Pkinase | 9.80E-68 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0208 | K04371 | - | csv:101218403 | 718.768 |