Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0211 ATGGGTTGCTTTCGTTGTACCGGTTCATCCAGCAAGAAATCGGAGAACATCGAAGAAAACAACCCCCATACCTTCAATTCCAAAACCCACAAGCCCGTTGATCGAACGCCTTCAGATAAAGCCAAAGTAAATTCAAGTTTGGCAGTGAAGAGGGATTCTGATGTGAAGGTGGTTGTGACAAAAGATGACCAATTGGCTTTAGATGTAAAGAAATTGAATTTAAAAGATGAGGTTTCTGAGGAAGGAGAATCCAATGGCCGTGCCAAGACTTTTACGTTTGAAGAACTCGCTGCTGCGACGGGCAATTTCAGGTCAGATTGCTTCTTGGGTGAAGGAGGATTTGGCAAAGTTTACAAGGGGTACTTGCAGAAAGTTAATGAGGTTGTAGCAATCAAACAACTTGACCGCAATGGACTTCAAGGAATTCGAGAGTTTGTTGTCGAAGTCTTGACTTTAAGTCTAGCTGATCATCCTAACCTTGTAAAACTTATTGGCTTTTGTGCTGAGGGGGATCAGAGGTTGTTGGTTTATGAATATATGCCATTGGGATCATTGGAAAACCATTTACACGATCTTCGACCCGGTGCAAAAGTAATTGATTGGAACACAAGAATGAAAATAGCAGCAGGTGCAGCGAGGGGGTTGGAGTATTTGCATGAGAAGATGAAGCCTCCGGTTATATATCGTGATCTGAAATGTTCAAACATTTTGCTCGGTGAAGGATATCATCCGAAGCTATCTGATTTCGGATTGGCTAAAGTAGGTCCTAGTGGGGATAAAACCCACGTTTCAACCAGGGTTATGGGCACATATGGGTATTGTGCTCCAGATTATGCAATGACGGGCCAGCTGACATTCAAATCAGATATTTACAGCTTTGGCGTTGTTTTATTGGAACTCATCACGGGCAGGAAAGCAATCGATCATTCAAAACCTCATTCAGAGCAAAATCTTGTGGCTTGGGCGCGACCTTTGTTTCGAGACCGGAAGAAGTTCTCACAAATGGTTGATCCATTGCTCCAAGGACAATATCCAGTGAGAGGATTATACCAATCTCTAGCCATAGCCGCAATGTGTGTTCAGGAGCAACCGAATATGCGGCCAGTTATATCTGATGTGGTAACTGCCTTAAACTACCTTGCTTCCCAGAAATATGATCCCCAATCTCAACCAAACCATAGCTCACAAAAGAGACCATCTTCTCTTAAAATGGAACGGAATGATGATAAGAGGGAACGGGACGATGATAAGAGGGAAACTTCAGACAACGAGGGGTCAGAGAGAGAGTGA 1290 43.41 MGCFRCTGSSSKKSENIEENNPHTFNSKTHKPVDRTPSDKAKVNSSLAVKRDSDVKVVVTKDDQLALDVKKLNLKDEVSEEGESNGRAKTFTFEELAAATGNFRSDCFLGEGGFGKVYKGYLQKVNEVVAIKQLDRNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPLGSLENHLHDLRPGAKVIDWNTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHSKPHSEQNLVAWARPLFRDRKKFSQMVDPLLQGQYPVRGLYQSLAIAAMCVQEQPNMRPVISDVVTALNYLASQKYDPQSQPNHSSQKRPSSLKMERNDDKRERDDDKRETSDNEGSERE 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2232119 2234948 + CePI673135_03g002110.1 Cec03g0211 197835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0211 429 MobiDBLite consensus disorder prediction 399 429 - -
Cec03g0211 429 FunFam probable serine/threonine-protein kinase RLCKVII 75 179 - -
Cec03g0211 429 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524(InterPro)
Cec03g0211 429 FunFam Serine/threonine-protein kinase PBS1 180 396 - -
Cec03g0211 429 MobiDBLite consensus disorder prediction 1 44 - -
Cec03g0211 429 SMART serkin_6 103 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0211 429 MobiDBLite consensus disorder prediction 384 398 - -
Cec03g0211 429 SUPERFAMILY Protein kinase-like (PK-like) 89 398 IPR011009 -
Cec03g0211 429 Pfam Protein kinase domain 108 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0211 429 Gene3D Transferase(Phosphotransferase) domain 1 180 406 - -
Cec03g0211 429 MobiDBLite consensus disorder prediction 384 429 - -
Cec03g0211 429 CDD STKc_IRAK 109 378 - -
Cec03g0211 429 Gene3D Phosphorylase Kinase; domain 1 71 179 - -
Cec03g0211 429 ProSiteProfiles Protein kinase domain profile. 103 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0211 429 MobiDBLite consensus disorder prediction 16 38 - -
Cec03g0211 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0211 429 PANTHER OS07G0668900 PROTEIN 52 405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2184 Cec-Chr2:39255015 Cec03g0211 Cec-Chr3:2232119 2.00E-150 dispersed
Cec03g0211 Cec-Chr3:2232119 Cec10g2072 Cec-Chr10:35445360 2.10E-144 dispersed
Cec02g2236 Cec-Chr2:39793312 Cec03g0211 Cec-Chr3:2232119 2.40E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71806 PF00069 Pkinase 5.70E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0211 - - - 0.0