Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0228 ATGGCGGCTGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTTGCGCTTGTTTGCTTCGTTTTGCTTCTCATCTCTATTTTCATCGAATATAGCCTCCATCTCATCGGACATTGGCTGAAGAAGAGACACAAACGGGCGTTATTTGAATCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCTCAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAAGTGAGATGAACAAAATGGGGGATCAATCTGTGCAACATTTGTCTACTAATGGCCGGAGACTCCTCCATCTGGCCGGAAATGGTGGAAGTTTCCGGCGGATTTTGGCCGCGCCCGGAGGAGCCGACAAGTGTGCTGCCAAGGGTCAAGTGTCATTTATTTCAGCAGAAGGAATTCATCAACTTCATATCTTCATATTTGTGTTGGCTGTTTTCCATGTTTTGTACTGTGTTCTTACTTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACATGGGAAAAAGAGACCAAAACTGCAGAATACCAATTCTCACATGATCCGGAGAGATTTAGGTTTGCAAGAGACACCTCGTTTGGGAGAAGACATTTGAGCTTCTGGACAAAGAATCCTGCCCTAATGTGGATAGTTTGTTTCTTCAGGCAATTTGTAAGATCTGTTCCAAAAGTTGATTACTTGACATTAAGACATGGGTTTATAATGGCACATTTAGCACCTCAAAGTCATACACAATTTGATTTTCAAAAGTACATTAATCGATCTCTTGAAGAGGACTTCAAAGTTGTTGTGGGAATCAGCCCACCAATTTGGTTCTTCGCTGTGCTGTTTCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTGCCATTCATCCCACTAATCATTTTGCTGCTGATCGGGACAAAGTTGCAAGTGATCATAACGAAAATGGCACTAAGAATACAAGAAAGAGGAGAAGTAGTGAAGGGCGTGCCAGTGGTTGAGCCTGGCGATGACCTTTTTTGGTTCAATCGCCCTCGCCTTATTCTTTATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTCCAAGTTGCCTTCTTTGCTTGGACTTGGTACGAGTTCGGGTTGAATTCTTGTTTCCATGAGCATACAGAGGATGTGGTGATCCGAATTTCAATGGGGGTGATTGTACAAATCCTTTGCAGTTATGTTACTCTTCCTCTTTATGCACTGGTCACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAATGAGAGAGTGGCAGCGGCCCTTCGCAATTGGTACCACTCGGCTCGGAAGCACATCAAACACAACCGCGGTTCGATCACTCCAATGTCGAGCCGACCTGCCACCCCGACTCACAGCATGTCACCGGTCCACCTTCTCCGTCACTACAAGAGTGAGGTCGATAGCTTCCACAACTCGCCGAGAAGGTCACCATTTGACACTGATCGTTGGGACAACGATTCGCCCTCACCGTCCCGTCATGCTGATGGTTCGTCTTCATCACAACCCCACATCGAGATGGGAGGCTATGACAAAGATCCGACAGAACCGGGGTCGACTCAAATTGACCCGGTTCAATCATCTCAAACCCGGACTCAACATGAGATTCAAATTGGCGGCCCCAAAGACTTTTCCTTTAACAGAGCAGAGTGA 1749 46.08 MAAAAGGKSLEQTPTWAVALVCFVLLLISIFIEYSLHLIGHWLKKRHKRALFESLEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEKESEMNKMGDQSVQHLSTNGRRLLHLAGNGGSFRRILAAPGGADKCAAKGQVSFISAEGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVAFFAWTWYEFGLNSCFHEHTEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHSARKHIKHNRGSITPMSSRPATPTHSMSPVHLLRHYKSEVDSFHNSPRRSPFDTDRWDNDSPSPSRHADGSSSSQPHIEMGGYDKDPTEPGSTQIDPVQSSQTRTQHEIQIGGPKDFSFNRAE 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2479828 2488313 - CePI673135_03g002280.1 Cec03g0228 197852

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0228 582 MobiDBLite consensus disorder prediction 551 568 - -
Cec03g0228 582 MobiDBLite consensus disorder prediction 499 582 - -
Cec03g0228 582 MobiDBLite consensus disorder prediction 523 537 - -
Cec03g0228 582 PANTHER MLO-LIKE PROTEIN 1 3 528 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cec03g0228 582 MobiDBLite consensus disorder prediction 499 522 - -
Cec03g0228 582 Pfam Mlo family 8 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0228 K08472 - - csv:101217225 1096.65
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0228 Cec-Chr3:2479828 Cec04g1809 Cec-Chr4:36851267 4.10E-143 dispersed
Cec03g0228 Cec-Chr3:2479828 Cec03g0230 Cec-Chr3:2535040 3.30E-129 proximal
Cec05g2309 Cec-Chr5:34381886 Cec03g0228 Cec-Chr3:2479828 1.70E-189 transposed
Cec02g2213 Cec-Chr2:39573532 Cec03g0228 Cec-Chr3:2479828 2.40E-255 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec09g1988 . 39 589 MLO family AT5G53760 69.2 3.6e-216 748.0
Cec11g1858 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cec03g0230 . 10 458 MLO family AT3G45290 52.7 4.1e-131 465.3
Cec09g1988 . 39 589 MLO family AT1G26700 67.8 2.8e-210 728.4
Cec11g1858 . 1 532 MLO family AT1G26700 68.3 1.8e-209 725.7
Cec03g0228 . 8 536 MLO family AT2G39200 63.5 6.1e-192 667.5
Cec05g2309 . 7 499 MLO family AT2G39200 67.7 8.0e-192 667.2
Cec02g2213 . 8 505 MLO family AT2G39200 67.3 5.2e-191 664.5
Cec02g2213 . 1 416 MLO family AT1G61560 65.9 2.9e-159 558.5
Cec03g0228 . 1 416 MLO family AT1G61560 65.9 1.3e-156 549.7
Cec05g2309 . 7 408 MLO family AT1G61560 65.2 9.0e-153 537.0
Cec04g1809 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cec10g0014 . 29 423 MLO family AT1G61560 50.2 5.5e-110 394.8
Cec04g1809 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cec10g0014 . 29 490 MLO family AT2G17430 63.4 1.5e-160 563.1
Cec08g0962 . 4 480 MLO family AT2G17430 58.1 1.3e-151 533.5
Cec04g1809 . 7 567 MLO family AT2G17480 63.4 1.9e-196 682.6
Cec10g0014 . 5 574 MLO family AT2G17480 59.1 5.2e-178 621.3
Cec08g0962 . 4 465 MLO family AT2G17480 59.7 2.9e-152 535.8
Cec03g0228 . 8 463 MLO family AT2G17480 52.2 6.7e-125 444.9
Cec02g2213 . 8 463 MLO family AT2G17480 50.5 1.5e-124 443.7
Cec08g0962 . 1 381 MLO family AT1G42560 59.7 3.2e-128 455.3
Cec04g1809 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cec10g0014 . 29 388 MLO family AT1G42560 56.5 1.6e-111 399.8
Cec06g0057 . 6 419 MLO family AT4G24250 54.2 7.7e-117 417.5
Cec04g1809 . 8 387 MLO family AT5G65970 66.8 8.0e-145 510.8
Cec10g0014 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cec08g0962 . 7 381 MLO family AT5G65970 58.2 3.6e-121 432.2
Cec02g2213 . 2 381 MLO family AT5G65970 52.1 3.3e-106 382.5
Cec03g0228 . 2 381 MLO family AT5G65970 50.7 8.4e-102 367.9
Cec08g0962 . 2 543 MLO family AT2G33670 60.4 9.2e-176 613.6
Cec04g1809 . 20 470 MLO family AT2G33670 61.6 5.0e-158 554.7
Cec10g0014 . 29 471 MLO family AT2G33670 58.7 7.3e-141 497.7
Cec05g2309 . 64 524 MLO family AT1G11310 63.9 4.2e-168 588.2
Cec03g0228 . 63 506 MLO family AT1G11310 64.9 4.3e-165 578.2
Cec02g2213 . 63 520 MLO family AT1G11310 62.7 1.5e-162 569.7
Cec06g0057 . 5 501 MLO family AT2G44110 59.5 2.5e-165 578.9
Cec06g0057 . 1 508 MLO family AT4G02600 72.9 1.2e-213 739.6
Cec05g1128 . 3 535 MLO family AT1G11000 58.7 1.3e-170 596.7
Cec06g0057 . 1 508 MLO family AT4G02600 72.9 1.2e-213 739.6
Cec05g2309 . 64 524 MLO family AT1G11310 63.9 4.2e-168 588.2
Cec03g0228 . 63 506 MLO family AT1G11310 64.9 4.3e-165 578.2
Cec02g2213 . 63 520 MLO family AT1G11310 62.7 1.5e-162 569.7
Cec03g0230 . 10 458 MLO family AT3G45290 52.7 4.1e-131 465.3
Cec05g1128 . 3 535 MLO family AT1G11000 58.7 1.3e-170 596.7
Cec08g0962 . 2 543 MLO family AT2G33670 60.4 9.2e-176 613.6
Cec04g1809 . 20 470 MLO family AT2G33670 61.6 5.0e-158 554.7
Cec10g0014 . 29 471 MLO family AT2G33670 58.7 7.3e-141 497.7
Cec02g2213 . 1 416 MLO family AT1G61560 65.9 2.9e-159 558.5
Cec03g0228 . 1 416 MLO family AT1G61560 65.9 1.3e-156 549.7
Cec05g2309 . 7 408 MLO family AT1G61560 65.2 9.0e-153 537.0
Cec04g1809 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cec10g0014 . 29 423 MLO family AT1G61560 50.2 5.5e-110 394.8
Cec04g1809 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cec10g0014 . 29 490 MLO family AT2G17430 63.4 1.5e-160 563.1
Cec08g0962 . 4 480 MLO family AT2G17430 58.1 1.3e-151 533.5
Cec04g1809 . 7 567 MLO family AT2G17480 63.4 1.9e-196 682.6
Cec10g0014 . 5 574 MLO family AT2G17480 59.1 5.2e-178 621.3
Cec08g0962 . 4 465 MLO family AT2G17480 59.7 2.9e-152 535.8
Cec03g0228 . 8 463 MLO family AT2G17480 52.2 6.7e-125 444.9
Cec02g2213 . 8 463 MLO family AT2G17480 50.5 1.5e-124 443.7
Cec08g0962 . 1 381 MLO family AT1G42560 59.7 3.2e-128 455.3
Cec04g1809 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cec10g0014 . 29 388 MLO family AT1G42560 56.5 1.6e-111 399.8
Cec04g1809 . 8 387 MLO family AT5G65970 66.8 8.0e-145 510.8
Cec10g0014 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cec08g0962 . 7 381 MLO family AT5G65970 58.2 3.6e-121 432.2
Cec02g2213 . 2 381 MLO family AT5G65970 52.1 3.3e-106 382.5
Cec03g0228 . 2 381 MLO family AT5G65970 50.7 8.4e-102 367.9
Cec09g1988 . 39 589 MLO family AT5G53760 69.2 3.6e-216 748.0
Cec11g1858 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cec03g0228 . 8 536 MLO family AT2G39200 63.5 6.1e-192 667.5
Cec05g2309 . 7 499 MLO family AT2G39200 67.7 8.0e-192 667.2
Cec02g2213 . 8 505 MLO family AT2G39200 67.3 5.2e-191 664.5
Cec06g0057 . 6 419 MLO family AT4G24250 54.2 7.7e-117 417.5
Cec09g1988 . 39 589 MLO family AT1G26700 67.8 2.8e-210 728.4
Cec11g1858 . 1 532 MLO family AT1G26700 68.3 1.8e-209 725.7
Cec06g0057 . 5 501 MLO family AT2G44110 59.5 2.5e-165 578.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001805 3 2 2 3 3 2 3 2 2 2 2 2 3 2 2 3 2 2 3 2 2 2 1 2 2 2 2 2 2 4 68