Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0237 ATGGAGAAAAGTGAGGCACATACGGTGGCGGTGGGTAGTCCGTGTGCGGCTTGTAAAATTCTCCGGCGAAGATGCCGAGAGAATTGCGAATTGGGGCCGTATTTTCCTCCAACGGAACCTCTCAAATTCACTATTGCTGATAGGGTCTTTGATGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTAAGTCGCAAAGAGCAGATGATGTGAACAGTATGGTATATGAGGCAAGTGCAAGAATAAGAGATCCAATTTATGGATGTGCAGGCTCAATTTTCCAACTCCAAAAACAAATAAATGACCTACAAGGAGAGTTAGCCAAGGCTCAAGCAGAGGTTCTCAAAATGCAATGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGGCTCAAATGCCACAACCACCAATGTATGATCATCAACCACTTAATCAAAATTACAACATGGCTAGCCCTCAAAGTTATCAAACCTATTCATACTTATTTGAGGAGCGTAATATTTTGGAGCCTCTTTGGACTTGA 531 42.0 MEKSEAHTVAVGSPCAACKILRRRCRENCELGPYFPPTEPLKFTIADRVFDASNIIKLLQDLPKSQRADDVNSMVYEASARIRDPIYGCAGSIFQLQKQINDLQGELAKAQAEVLKMQCQQANLMTLICKELAQMPQPPMYDHQPLNQNYNMASPQSYQTYSYLFEERNILEPLWT 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2643518 2645769 - CePI673135_03g002370.1 Cec03g0237 197861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0237 176 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Cec03g0237 176 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Cec03g0237 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 144 - -
Cec03g0237 176 Coils Coil 93 120 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0237 Cec-Chr3:2643518 Cec07g0514 Cec-Chr7:5931469 2.10E-34 dispersed
Cec03g0237 Cec-Chr3:2643518 Cec03g0239 Cec-Chr3:2671772 1.80E-62 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29173 PF03195 LOB 1.20E-35 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0237 - - - 0.0