Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0257 ATGGATTCAGAAGTATGGGCATTCACAAAACAAGTTTTAGCAGGACGATGGTTTTCGGTATTCGCCGGCTTAATAATGATGCTTGGCAATGGCTCCACTTACATCTATGGAACATATTCAAAAGTCATCAAGACCCGATTTGATTATAGCCAAACCCAAATTAACATATTAGGATTTGCTAAAGATCTCGGCTCCAATGTCGGTATTTTCGCGGGTCTTCTAGCCGAGGTGGCTCCGCCGTGGGTTCTCTTCGTACTCGGTGCTGCCCAGAACTTCGCTGGGTTCTTCTTGGTATGGCTGGCCATCACACACCGTATCCCTCAACCAAAATTCTGGCAAATGTTCCTTTTCGTTTGCTTTGGTACTAATTCTTCAAATTTTGGGAATACAGCCATTATGGTGGCTAGTGTAAGAAACTTCCCTGACCGTCGTGGTATCATTTTGGGGTTGCTGAAAGGGTTTGTTGGTATTGGTGGTGCTGTTTATACCCAAATATATTTAGGTCTTTACGGCCATGAAGATCCAGCTAATCTTGTTCTTCTTTTTGCTTGGCTTCCCTCTACAGTAATCCTCATTCTTTTCCCCTCAATTCGATCAATACGTATCCGTAAACATCCTGAAGAACTCAAAGTGTTTTACCATTTACTTTACGTCTCTATCGTTATAGCTCTGTTCATCCTGTTTTTAACCCTTGCACAGAAAGAAGTTGTTTTCTCTCAAGCTGGGTATGGGAGTGGAGCAACCGTGGTGGTTGCGTTACTATTCCTACCCCTTTTAATCACATGTAGAGAAGAATTCTTATTGTACAGACTCAACAAACAAAACGATGACGCTTCGGTAACTCTATCCGTCAATGAGCAAAAGCCTCCCACCGTAATAACAACAGAGAAAACAGAGATTTCGGGGTCGTGTTTGTCAAGAGTATGGAATAAACCTGAAAGAGGGGAAGATTTCACCATCTTGCAAGCTATCTTCAGTATAGATATGGCTCTTATTTATCTAGCTACTTTTTCTGGATCTGGTTCTTCTCTTGCAGCCATTGATAATTTAGGCCAGATTGGGGAATCACTTGGCTACCCACCACGAGCGATAAGCATCTTCGTTTCTTGGGTTTCCGTATTCAATTTCTTCGGCCGAGTCTTCTCCGGTTTCATCTCGGAAACTATGATGACTAAATACAAATTACCTCGTCCTCTATTATTTGCTTTTGCCTTTCTCATCACTTGCATCGGCCAGCTTATCATCGCGTATCCCACTCGGGGTTCCGTCTACCTTGCTTCCATGATTATCGGGTTCGGGTTCGGAACTCAAGTGCCATTGCTATTCGCCATAATCTCTGAGATTTTTGGGCTAAAACATTACTCCACATTGTTCAATTTTGGGCAATTGGTAGTCCCAATTGGATCTTATTTACTAAACGTGGATGTCGTAGGCAGGTTGTACGATAAGGAAGCATTACGTGAAGGTAGAAAGATGACGGGCAAGGGGATAACTTGCACCGGAGCTCATTGCTTTAGTGGATCTTTCACTATTTTGGCTGCAGCGACATTGTTTGCAGCTTTGATTATGCTTGTGTTGGCTTATAGGACTCGAGAATTCTACAAAGGAGATGTATACAAGAAATACAGAGAGGATATATGGATTTCGCAGACCGAAATGGAGTTCTATCGCGTAGACAAAAAGACACTTGACGACTAA 1698 42.64 MDSEVWAFTKQVLAGRWFSVFAGLIMMLGNGSTYIYGTYSKVIKTRFDYSQTQINILGFAKDLGSNVGIFAGLLAEVAPPWVLFVLGAAQNFAGFFLVWLAITHRIPQPKFWQMFLFVCFGTNSSNFGNTAIMVASVRNFPDRRGIILGLLKGFVGIGGAVYTQIYLGLYGHEDPANLVLLFAWLPSTVILILFPSIRSIRIRKHPEELKVFYHLLYVSIVIALFILFLTLAQKEVVFSQAGYGSGATVVVALLFLPLLITCREEFLLYRLNKQNDDASVTLSVNEQKPPTVITTEKTEISGSCLSRVWNKPERGEDFTILQAIFSIDMALIYLATFSGSGSSLAAIDNLGQIGESLGYPPRAISIFVSWVSVFNFFGRVFSGFISETMMTKYKLPRPLLFAFAFLITCIGQLIIAYPTRGSVYLASMIIGFGFGTQVPLLFAIISEIFGLKHYSTLFNFGQLVVPIGSYLLNVDVVGRLYDKEALREGRKMTGKGITCTGAHCFSGSFTILAAATLFAALIMLVLAYRTREFYKGDVYKKYREDIWISQTEMEFYRVDKKTLDD 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2812594 2814291 + CePI673135_03g002570.1 Cec03g0257 197881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0257 565 SUPERFAMILY MFS general substrate transporter 16 532 IPR036259 -
Cec03g0257 565 Gene3D MFS general substrate transporter like domains 318 535 IPR036259 -
Cec03g0257 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 542 - GO:0016020(PANTHER)
Cec03g0257 565 Pfam Nodulin-like 16 261 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0253 Cec-Chr3:2788909 Cec03g0257 Cec-Chr3:2812594 1.20E-75 dispersed
Cec03g0257 Cec-Chr3:2812594 Cec03g0259 Cec-Chr3:2821032 5.40E-217 dispersed
Cec03g0257 Cec-Chr3:2812594 Cec03g0258 Cec-Chr3:2816807 4.40E-243 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0257 - - - 0.0