Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0258 ATGGGATCAGAAGCCTGGGCTTTCACCAAACAAGTCATAGAAGGACGATGGTTTTCAGTATTCGCCGGAATGATGATGATGATCGGCAATGGTTCGACATACATTTATGGAACATATTCCAAAGTCGTCAAGACCGAATTTAATTACAGCCAAACCCAAATTAACACATTAGGATTCGCCAAAGATCTCGGTTCCAACGCCGGAATTTTCGCCGGCCTTCTCGCCGAGGTGGTTCCCACGTGGGTTCTCTTCATGATCGGTGCTGCCCAAAACTTCACTGGCTACTTCTTCATATGGCTGGCCATCACACGTCGTATCCCTCAACCAAAATTCTGGCAAATGTTCCTTTTCGTTTGTTTTGGAACTAATTCTTCTAATTTTTCCAATACAGGAATTATGGTCAATAGCGTCAGAAACTTCCCTGACCGTCGTGGTATCATTTTAGGGTTGCTTAAAGGGTATGTTGGTATTGGAGGTGCTATTTTAACCCAAGTTTATTTAGGAATTTATGGCCCTGACGACCCATCAAATCTTGTTCTTCTTTTTGCTTGGTTTCCCACTACAGTAATTCTCCTTCTTTTCACCTCCATTCGACCAATTCGTATTCGTAAACATCCCGAAGAACTCAAAGTTTTTTACCATTTACTTTACGTCTCTGTTGTTCTAGCAATTTTCATCTTGTTTTTGACTATTACACAAAAAGAAGTGGTTTTCTCTCAAGCTGCACTCAAGAAACAAAACTTTAACCTTGATCCTTCTGTTGCTCTATCCATTGTTGATCCAAAGATTTCTTCTCAAACCACCACTAACAAACCATTTCCCACATTAGAGGAAGTAGCAGAGATTTCGCCCACGACGTGTTTCGAAAACATATGCAACAAACCAGAACGAGGCGAAGATTTCACCATCTTGCAAGCCATCTTTAGCAAAGATATGGCTCTTATTTCTTTAGCTACTTTTTCTGGATGTGGGTCTTCTCTTGCAGCCATTGATAATTTAGGCCAAATTGGTGAATCACTTGGCTATCCACCACGAGCTATAAGCATATTTGTTTCATGGGTTTCCATATTCAATTTCTTTGGCAGAGTCTTCTCAGGTTTCATCTCCGAAAACTTGATTATCAAATACAGATTACCTCGTCCTTTAACATTTGCTTTTGCCTTTCTTCTCACTTGCATTGGCCAGCTTTGCATCGCGTATCCATTTCCGGGTTCAGTCTACGTCGCTTCGATTGTTATCGGGTTCGGATTTGGAGCTCAAAATCCATTACTATTCGCGGTAATCTCAGAGATGTTTGGACTAAAACATTACGCCACATTGTTCAATTGTGGGCAATTGGTAGTCCCAATAGGGTCTTATATACTAAATGTGGATATAGTTGGGAAATTGTATGATACAGAAGCTTTACGTGAAGGTAGAAAGATGACGGGCAAGGGGATAACTTGCACGGGAGCTCATTGTTTTAGTGGATCTTTCACAATTTTGGCTGCAGTGACATTGTTTGGAGCTCTGGTTATGCTTGTGTTGGCCTATAGGACACGAGAATACTATAAATGGGATGTATATAAGAATTGCCGAGAGGATATATGGATTCCCCAAGAAGAAATGGAGTTCTATGGCTTAGACAACAGGAAGAACATTGATGACTAA 1650 40.91 MGSEAWAFTKQVIEGRWFSVFAGMMMMIGNGSTYIYGTYSKVVKTEFNYSQTQINTLGFAKDLGSNAGIFAGLLAEVVPTWVLFMIGAAQNFTGYFFIWLAITRRIPQPKFWQMFLFVCFGTNSSNFSNTGIMVNSVRNFPDRRGIILGLLKGYVGIGGAILTQVYLGIYGPDDPSNLVLLFAWFPTTVILLLFTSIRPIRIRKHPEELKVFYHLLYVSVVLAIFILFLTITQKEVVFSQAALKKQNFNLDPSVALSIVDPKISSQTTTNKPFPTLEEVAEISPTTCFENICNKPERGEDFTILQAIFSKDMALISLATFSGCGSSLAAIDNLGQIGESLGYPPRAISIFVSWVSIFNFFGRVFSGFISENLIIKYRLPRPLTFAFAFLLTCIGQLCIAYPFPGSVYVASIVIGFGFGAQNPLLFAVISEMFGLKHYATLFNCGQLVVPIGSYILNVDIVGKLYDTEALREGRKMTGKGITCTGAHCFSGSFTILAAVTLFGALVMLVLAYRTREYYKWDVYKNCREDIWIPQEEMEFYGLDNRKNIDD 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2816807 2818539 - CePI673135_03g002580.1 Cec03g0258 197882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0258 549 SUPERFAMILY MFS general substrate transporter 16 515 IPR036259 -
Cec03g0258 549 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 524 - GO:0016020(PANTHER)
Cec03g0258 549 Gene3D MFS general substrate transporter like domains 312 524 IPR036259 -
Cec03g0258 549 Pfam Nodulin-like 16 243 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0258 Cec-Chr3:2816807 Cec03g0260 Cec-Chr3:2826759 1.10E-190 dispersed
Cec03g0257 Cec-Chr3:2812594 Cec03g0258 Cec-Chr3:2816807 4.40E-243 tandem
Cec03g0258 Cec-Chr3:2816807 Cec03g0259 Cec-Chr3:2821032 4.50E-208 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0258 - - - 0.0