Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0267 | ATGGGAGATGTAGAAGGTTCCCCAGGAAGCTCTATGCATGGGGTGACGGGAAGAGAGCAAAGTTTTGCATTTTCCGTAGCTTCCCCAATTGTCCCAACGGACACAACCGCGAAATTTGCATTACCCGTTGACTCTGAGCACAAAGCGAAGGTTTTCAAGGTGTGGTCTTTAGCCAACCCCCACATGAGAACCTTCCACCTTTCTTGGATTTCCTTCTTTACATGCTTCGTCTCCACATTCGCAGCCGCCCCTCTGGTCCCCATCATTCGAGACAATCTCAACCTCACCAAAGTTGACATCGGTAACGCCGGAGTCACCTCCGTGTCTGGCAGTATCTTCTCTCGTCTTGTAATGGGGGCTGTGTGTGACCTTCTGGGGCCACGCTATGGGTGTGCTTTTCTCATTATGCTCTCCGCCCCCACCGTGTTTTGTATGTCCTTTGTGTCCAACGCTGCTGGGTATATAGCTGTGAGATTCATGATTGGCTTCTCGCTTGCCACCTTCGTCTCCTGCCAGTATTGGATGAGCACCATGTTCAACAGTCAGATCATTGGGCTTGTGAATGGGACTGCTGCTGGGTGGGGGAATATGGGCGGAGGAGCCACTCAGCTCATCATGCCTTTGTTGTATGATATCATTCAGAGAGCTGGCGCTACTCCTTTCACTGCTTGGAGGATTGCCTTCTTTATCCCTGGTTCCCTTCATATTCTCATGGGCATTTTGGTCTTAACTCTTGGCCAGGACTTGCCTGATGGTAACCTTACCAGTCTTCAGAAGAAGGGCAATGTTGCCAAAGATAAATTCTCCAATATCCTGTGGTATGCTGTCACCAATTACCGAACTTGGATCTTCGTCCTCCTCTATGGCTACTCCATGGGGGTCGAACTTTCCACCGATAACGTCATTGCCGAATACTTCTACGACAGGTTTGATCTAAAGCTACACACGGCAGGAATTATCGCAGCAACGTTCGGGATGGCGAATCTAGTGGCTCGACCGTTCGGGGGGTATGCATCGGACGTGGCAGCGCGGTACTTCGGGATGAGAGGAAGGCTGTGGACTTTGTGGATCCTACAAACATTTGGGGGAGTGTTTTGCATGTGGCTTGGGAAAGCAAACAAACTGACAACAGCAATAGTTGCAATGATATTGTTCTCCTTAGGAGCACAGGCTGCGTGTGGAGCAACATTTGGGATCATTCCCTTCATTTCTCGACGGTCTTTAGGAATTATATCAGGACTGACAGGAGCAGGAGGCAACTTTGGAAGTGGTTTGACACAATTAGTGTTCTTCTCAACCACCAAATACTCAACAGACACAGGCTTGTTCTTGATGGGAATAATGATTGTATGTTGCACTTTACCAGTCAGTTTGGTTCATTTCCCTCAATGGGGAAGCATGTTTTTACCTCCCACGAAACATGTTGAAAAATCCACTGAGGAATTTTATTATGGCTCTGAATGGACTGAGGATGAAAAGAAGAAGGGTTTGCATCAACAAAGCATTAAGTTTGCTGAGAATAGCAGATCTGAACGTGGTAGGCGTGTGGCTTCAGCTCCAACTCCACCAAATACAACTCCTTCCCATGTTTAA | 1593 | 48.02 | MGDVEGSPGSSMHGVTGREQSFAFSVASPIVPTDTTAKFALPVDSEHKAKVFKVWSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVTSVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSNAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLIMPLLYDIIQRAGATPFTAWRIAFFIPGSLHILMGILVLTLGQDLPDGNLTSLQKKGNVAKDKFSNILWYAVTNYRTWIFVLLYGYSMGVELSTDNVIAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDVAARYFGMRGRLWTLWILQTFGGVFCMWLGKANKLTTAIVAMILFSLGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTTKYSTDTGLFLMGIMIVCCTLPVSLVHFPQWGSMFLPPTKHVEKSTEEFYYGSEWTEDEKKKGLHQQSIKFAENSRSERGRRVASAPTPPNTTPSHV | 530 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2931821 | 2933773 | - | CePI673135_03g002670.1 | Cec03g0267 | 197891 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0267 | 530 | Gene3D | MFS general substrate transporter like domains | 264 | 464 | IPR036259 | - | |
Cec03g0267 | 530 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 64 | 458 | IPR020846 | GO:0022857(InterPro) | |
Cec03g0267 | 530 | SUPERFAMILY | MFS general substrate transporter | 58 | 459 | IPR036259 | - | |
Cec03g0267 | 530 | Pfam | Major Facilitator Superfamily | 69 | 425 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cec03g0267 | 530 | PANTHER | HIGH-AFFINITY NITRATE TRANSPORTER 2.3 | 7 | 515 | IPR044772 | GO:0005886(PANTHER)|GO:0015112(InterPro)|GO:0015112(PANTHER)|GO:0015706(PANTHER)|GO:0071249(PANTHER) | |
Cec03g0267 | 530 | FunFam | Nitrate transporter 2.1 | 265 | 466 | - | - | |
Cec03g0267 | 530 | FunFam | High affinity nitrate transporter | 57 | 254 | - | - | |
Cec03g0267 | 530 | Gene3D | MFS general substrate transporter like domains | 58 | 254 | IPR036259 | - | |
Cec03g0267 | 530 | MobiDBLite | consensus disorder prediction | 490 | 513 | - | - | |
Cec03g0267 | 530 | CDD | MFS_NRT2_like | 65 | 458 | IPR044772 | GO:0015112(InterPro) | |
Cec03g0267 | 530 | MobiDBLite | consensus disorder prediction | 490 | 530 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0267 | Cec-Chr3:2931821 | Cec05g2781 | Cec-Chr5:38210149 | 3.10E-174 | dispersed | |
Cec03g0266 | Cec-Chr3:2918267 | Cec03g0267 | Cec-Chr3:2931821 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0267 | K02575 | - | csv:101218006 | 1045.42 |