Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0303 | ATGTCTCAGGATTTGTCATTGGATCAAGACCTGGATGAATCTGATCCCGAGTTCGTCGAGATTGATCCTACTGGTCGATATGGAAGGTATAAAGAAATTTTGGGCAAAGGGGCATTCAAAAGGGTATATCGGGCTTTTGATGAGTTGGAAGGGATTGAAGTAGCTTGGAATCAGGTTAAGGTAACGGATCTATTGCGAAACTCTGAAGATTTGGAGAGACTTTATTCAGAAGTTCATTTGCTTAAGACATTGAAGCACAAGAACATAATCAAATTTTACAATTCATGGGTTGATACGAAAAATGAGAACATTAACTTCATTACTGAGATATTTACTTCAGGGACACTACGACAATATAGAAAGAAACACAAGCATGTTGATTTGAGAGCATTGAAAAAGTGGTCCAGGCAGATATTAGAGGGCCTTCTATATCTTCATAGTCATGACCCTCCAGTTATACATAGAGATTTAAAATGTGACAATATCTTTGTAAATGGCAACCAAGGTGAGGTGAAAATTGGTGACTTAGGACTTGCCGCCATTCTTCAACAAGCTCGTTCAGCCCACAGTGTCATTGGGACACCCGAATTTATGGCTCCGGAGCTGTATGAGGAGGAATACAATGAGCTTGTGGATATTTATGCCTTTGGAATGTGTTTGCTTGAGCTTGTAACCTTTGAATATCCATATATTGAATGTGCAAATGCTGCTCAAATATATAAGAAGGTCACATCAGGGATTAAACCAGCTTCATTGGCAAAAGTCACTGATTTAGGAGTGAAAGCATTTATAGAAAAATGTATTGCAAATGTCTCTGATCGTTTACCTGCAAAAGATCTTTTAAAAGATCCATTTCTCCAAGCAGATGATGATCATGAAAGTGCATCTCGTCATTTACAATCAAAGACCCTTCATGCAGGAAAAAGAGAGCAAATTAATTTTGATCGAAGTGTAGATGATACTTCTGTTGAGACAAGCAGAGATTTCAGTATGCATGGCGAGAGGAAAGATGTTAACAAGATATTTCTCAAACTACGAATTGCTGATTCCATGGGTAATTATCGCAATATCCATTTCCCATTTGATATTGAAGCCGACACAGCAATTTCTGTTGCTAGTGAAATGGTAGAGGAGTTAGACCTTTCTGATCAAGATGTCTCCACAATTTCGGAAATGATTGAAACAGAAATTCGATCTTACATTCCAGATTGGATATCAGTTGAGTACTCTGGAGATAATGTAGGTGCTGATGTTGCAATTTCTGATAGCTCTCCTTCTGAAACAAGGAATGCTGCCTCTCCATTGTCTATGGAATCTGGTAATCTTGCATTAGAGGTTATGCCTTCAGGTCGCAAGTATTGGTCAGACTCTCCAAAGGGAATTGGTGGATGTTCTCCTATTAAGCCAGGTCCTTCAAACTTGTCTTTTACCTTAGATCAAAATGTTGAATCCTCCAACACCCCCATACATGGGGACAATCTAGACCATGCTGCCATAATTAAGGGATTGGAAAGTGAGCTTTTGTTAGAGGGCGGTGATCATGATGGACGGGATGAGGATAAATCAACTACAAATATTCATGCTAGCTCTGAAGCACATCTTTTAGAAGAGAACAATTATGATGAATCAGTTGACCTTGAAATAATAGCTGAGAAACTTGAAATTTTGTTGACACAACAACAGAAGGAATTAGATGAACTAAAGAAAAAGCATAAATTAGCTATTTCAGAACTTTTGACTAAACTTGCACCTGAGTCCTATCAGAAGGTTATAGAGATGTGTCCGCTAAAACCTGATTTTGAGTTGGTTCTTTGA | 1815 | 38.35 | MSQDLSLDQDLDESDPEFVEIDPTGRYGRYKEILGKGAFKRVYRAFDELEGIEVAWNQVKVTDLLRNSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYIECANAAQIYKKVTSGIKPASLAKVTDLGVKAFIEKCIANVSDRLPAKDLLKDPFLQADDDHESASRHLQSKTLHAGKREQINFDRSVDDTSVETSRDFSMHGERKDVNKIFLKLRIADSMGNYRNIHFPFDIEADTAISVASEMVEELDLSDQDVSTISEMIETEIRSYIPDWISVEYSGDNVGADVAISDSSPSETRNAASPLSMESGNLALEVMPSGRKYWSDSPKGIGGCSPIKPGPSNLSFTLDQNVESSNTPIHGDNLDHAAIIKGLESELLLEGGDHDGRDEDKSTTNIHASSEAHLLEENNYDESVDLEIIAEKLEILLTQQQKELDELKKKHKLAISELLTKLAPESYQKVIEMCPLKPDFELVL | 604 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3450613 | 3454238 | - | CePI673135_03g003030.1 | Cec03g0303 | 197927 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0303 | 604 | CDD | STKc_WNK | 26 | 286 | - | - | |
Cec03g0303 | 604 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 13 | 575 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Cec03g0303 | 604 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 152 | 164 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g0303 | 604 | Coils | Coil | 550 | 577 | - | - | |
Cec03g0303 | 604 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 294 | - | - | |
Cec03g0303 | 604 | Pfam | Protein kinase domain | 31 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0303 | 604 | SUPERFAMILY | Protein kinase-like (PK-like) | 30 | 287 | IPR011009 | - | |
Cec03g0303 | 604 | FunFam | probable serine/threonine-protein kinase WNK9 | 111 | 291 | - | - | |
Cec03g0303 | 604 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 343 | 397 | IPR024678 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
Cec03g0303 | 604 | Gene3D | - | 339 | 404 | - | - | |
Cec03g0303 | 604 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 109 | - | - | |
Cec03g0303 | 604 | ProSiteProfiles | Protein kinase domain profile. | 28 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0303 | 604 | SMART | serkin_6 | 28 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0303 | 604 | FunFam | Probable serine/threonine-protein kinase WNK1 | 12 | 109 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1719 | Cec-Chr2:34930948 | Cec03g0303 | Cec-Chr3:3450613 | 1.50E-139 | dispersed | |
Cec03g0303 | Cec-Chr3:3450613 | Cec05g0074 | Cec-Chr5:732156 | 5.30E-138 | dispersed | |
Cec03g0303 | Cec-Chr3:3450613 | Cec06g0622 | Cec-Chr6:7000913 | 2.30E-141 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71807 | PF00069 | Pkinase | 1.10E-49 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0303 | K08867 | - | csv:101206177 | 1063.91 |