Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0324 ATGGCACCGCCTACAGTCCCTCTCTCTCTCCTCTCCCTCTTCCTCTTCTCCGTCTCTCTATCCGCCGCTCTCTCCGCTGCCCCTGCCGCCGTTCCCAACCCTGAACTCGTCGTACAAGAAGTACACAGAAGCATAATCAATGCGACGAAGAGGAGGAATTTAGGGTATCTCTCATGTGGGACTGGAAATCCAATCGACGATTGCTGGCGGTGCGATCCCAATTGGGAGAAAAATCGTCAGAGACTAGCCGACTGTGGGATTGGATTCGGCAAAAACGCCATTGGCGGTCGCGACGGCCAAATCTACGTCGTCACTGACTCCGGCGACGATGATCCAGTTAACCCTAAACCAGGAACTCTCCGTTACGCCGTAATCCAAGATGAACCCCTCTGGATCATCTTCGCTCGCGATATGGTGATTCGATTGAAAGAAGAACTGATTATGAATTCCTTCAAAACCATTGACGGCCGTGGCGCTAGCGTCCATATCGCTGGTGGGCCTTGCATTACAATTCAGTACGTGACAAACATTATAATCCATGGTCTCAACATTCACGACTGTAAGCCAGGGGGAAACACGGACGTGAGAGATTCCCCTCGACATTTCGGATTCAGAACCATTTCGGACGGGGACGGCGTTTCGATCTTCGGCGGCAGCCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGTAACGATGGATTGATCGACGCCATTCATGGGTCTACTGCGATTACGATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGTTGGGGCACAGTGATTCGTACACTCAGGACAAGAATATGCAAGTCACCATTGCTTTCAACCATTTTGGTGAAGGTCTTGTTCAAAGAATGCCCAGATGCAGACATGGGTATTTTCATGTGGTGAACAACGACTATACGCATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCAACTATCAACAGTCAAGGGAACAGATTTGTTGCACCGGATGACAGATTCAGCAAAGAGGTGACAAAATATGAGGATGCACCGGAGAGTGAGTGGAAGAATTGGCATTGGAGATCAGAAGGAGATCTGATGCTAAACGGTGCATTTTTCACTGCCTCCGGCGCCGGAGCGTCGTCAAGTTACGCTAGAGCATCGAGTTTAGGGGCGAGACCGTCGTCGCTCGTCGGTACAATTACGACAAATGCGGGTGCACTGAACTGCAGAAAGGGCTCCCGCTGCTGA 1236 49.92 MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3676051 3678066 - CePI673135_03g003240.1 Cec03g0324 197948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0324 411 Gene3D - 62 404 IPR012334 -
Cec03g0324 411 Pfam Pectate lyase 147 328 IPR002022 -
Cec03g0324 411 PANTHER PECTATE LYASE 18-RELATED 21 408 IPR045032 GO:0030570(InterPro)
Cec03g0324 411 SUPERFAMILY Pectin lyase-like 38 406 IPR011050 -
Cec03g0324 411 PRINTS Pollen allergen Amb family signature 85 102 IPR018082 -
Cec03g0324 411 PRINTS Pollen allergen Amb family signature 382 405 IPR018082 -
Cec03g0324 411 PRINTS Pollen allergen Amb family signature 289 308 IPR018082 -
Cec03g0324 411 PRINTS Pollen allergen Amb family signature 353 377 IPR018082 -
Cec03g0324 411 PRINTS Pollen allergen Amb family signature 209 230 IPR018082 -
Cec03g0324 411 PRINTS Pollen allergen Amb family signature 311 330 IPR018082 -
Cec03g0324 411 PRINTS Pollen allergen Amb family signature 109 134 IPR018082 -
Cec03g0324 411 PRINTS Pollen allergen Amb family signature 145 161 IPR018082 -
Cec03g0324 411 SMART amb_all 137 334 IPR002022 -
Cec03g0324 411 FunFam Pectate lyase 62 404 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0324 Cec-Chr3:3676051 Cec08g1811 Cec-Chr8:29105402 7.70E-189 dispersed
Cec03g0324 Cec-Chr3:3676051 Cec05g0410 Cec-Chr5:3382931 3.00E-177 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0324 K01728 - csv:101209736 778.859