Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0348 ATGGCTGCCCATTCCGTTGATTCCCGGAGCGGTTTCTGTCCTCAAACCAAGATTTACAAGAGCCTCCGACCACCCTTCTCGCTTCCGCCGTTATCTCAGCCACTCACCGTTGCCGGACATGCTCTTTCTGTTCTCCGATCATCTCTTCCTCCGCCGAACACTGCTGCTCTCGTCGACTCCGACTCCGGCGTCACTGTCTCTTACGCCCTTTTCCTCCGTCAAATCCGAAACCTCACCTCTAACCTTAGAGCTCTTTACTCCTTCTCCAATGGTCAAGTGGCTTTTATTCTTTCACCGACTTATTTGCAAATTCCTGTGTTGTATTTCGCTCTCTTATCTCTCGGCGTTATTGTCTCTCCGGCTAATCCAATCAGTTCCGAATCGGAGATTGCTCACCAGGTTAGTCTCTGTAAACCGGTCATTGCCTTCGCTACTTCCTCAACGGCGTCCAAGCTCCCGAGGCTTCCACTTGGTACTGTACTGATAGATTCGCCGGAGTTTCTATCTATGATGACTGAAATTAGTCGATTGGAAGGAGTAAACGATGGCATTGTGGACGGAGAAATCAATCAAAACGACTCCGCGGCGATTCTTTACTCTTCAGGGACTACCGGACGAGTGAAAGGCGTCTTACTCTCTCACCGGAACCTCATATCGGCGATCTCTGGGGTTCAAGTATTGGAGAAAACGCCCGTCGAAGGAGAGATTGAGCCACATCCCGTTGCTCTGTGTCTATTACCTCTGTTCCATGTTTTCGGGTTCTTTATGTTGTTTCGATCGATTTCAGAGGGCAATACATTGGTTCTGATGCGTAAATTCGATTTCCAGAGGATGTTAGGAGCAGTGGAGAAGTATAGGGTTACATACATTCCGGTTTCTCCGCCGCTGGTCGTGGCGATGGCCAAATCGGAGTTGGTGGCTAAGTATGATCTCAGCTCTCTTCAAATTTTGGGATGCGGCGGCGCTCCTCTCGGTAAAGAAGTCATTGATAAATTCCATCTCAGGTTTCCCAACGTAGAAATTATACAGGGATATGGCTTGACAGAGAGTTCAGGAGCGGCATCAAGAACTGTGGGGCCTGAAGAATGCAGTAATGCAGGTTCAGTAGGTCGCCTATCTGAAAATATGGAAGCCAAAATAGTTGATCCTTCGTCTGGAGAAGCCTTACCTCCTGGTCACAAAGGCGAACTTTGGCTGCTAGGTCCAGGAATCATGAAAGGTTATGTTGGAGATGAAAGGGCAACTGCTGAAACCTTGCATCCTGAGGGATGGCTAAAGACTGGTGACCTTTGTTACTTTGATTCTGATGGATTTCTCTACATCGTTGATCGATTAAAAGAATTGATCAAGTACAAGGCTTTTCAGGTCCCACCTGCTGAATTGGAACATTTGCTTCAATCCCATCCCGAGATCCTTGACGCTGCTGTGATACCCTATCCTGATGAAGAAGCTGGAGAGATTCCTTTAGCTTATGTGGTTAGAAAGCCTGAAAGTAATATCAGTGCGACTCAAGTCATGGATTTTGTTGCAAAACAGGTTGCACCATACAAGAAAATCCGACGAGTTTCTTTTGTCAACACAATCCCGAAATCGCCTGCAGGGAAGATTCTTAGGAGGGAGCTTGTCCAACATGCTCTCTCTCATGGTTCTAGCAAGCTATAA 1662 47.35 MAAHSVDSRSGFCPQTKIYKSLRPPFSLPPLSQPLTVAGHALSVLRSSLPPPNTAALVDSDSGVTVSYALFLRQIRNLTSNLRALYSFSNGQVAFILSPTYLQIPVLYFALLSLGVIVSPANPISSESEIAHQVSLCKPVIAFATSSTASKLPRLPLGTVLIDSPEFLSMMTEISRLEGVNDGIVDGEINQNDSAAILYSSGTTGRVKGVLLSHRNLISAISGVQVLEKTPVEGEIEPHPVALCLLPLFHVFGFFMLFRSISEGNTLVLMRKFDFQRMLGAVEKYRVTYIPVSPPLVVAMAKSELVAKYDLSSLQILGCGGAPLGKEVIDKFHLRFPNVEIIQGYGLTESSGAASRTVGPEECSNAGSVGRLSENMEAKIVDPSSGEALPPGHKGELWLLGPGIMKGYVGDERATAETLHPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAFQVPPAELEHLLQSHPEILDAAVIPYPDEEAGEIPLAYVVRKPESNISATQVMDFVAKQVAPYKKIRRVSFVNTIPKSPAGKILRRELVQHALSHGSSKL 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3889011 3892201 - CePI673135_03g003480.1 Cec03g0348 197972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0348 553 CDD 4CL 29 541 - -
Cec03g0348 553 FunFam 4-coumarate--CoA ligase 2 447 548 - -
Cec03g0348 553 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Cec03g0348 553 Pfam AMP-binding enzyme 52 408 IPR000873 -
Cec03g0348 553 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Cec03g0348 553 SUPERFAMILY Acetyl-CoA synthetase-like 51 547 - -
Cec03g0348 553 Gene3D - 34 446 IPR042099 -
Cec03g0348 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 541 - GO:0016405(PANTHER)
Cec03g0348 553 Gene3D - 447 547 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0348 Cec-Chr3:3889011 Cec05g1691 Cec-Chr5:28083572 5.60E-134 dispersed
Cec03g0347 Cec-Chr3:3879341 Cec03g0348 Cec-Chr3:3889011 1.80E-249 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0348 K01904 - csv:101211791 973.77