Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0355 | ATGGTTTCAACGAGAAGAAGTGGATCTCTCTCTGGTAGCAATAGCAAAAGATCTTCGTCCTCGGAGGATAAGCCATCGTCACCGAAGCGTCAAAAGGTGGAAAATGGGTGTGGCTCAGAGAAATCGATGCCGGCGGCGGAGAATTCTAAGGAATTATGCACCGCGCCGACTGTGGATCCCGGAGAGCATGGACCTGGCGGTGGTCCGATCGCTGGAGTTGACGTGGGAGAAGGTGTGAGCTCTTTGAAGGAGGATGCTGCACCAGCGGCCGTCGCTCTTACCACTCCTATCGCCGAGGGAACTTCGCTGGTAGGGGATAAGCCTAGGAGTTCTTTTTCATCATGGAGTCACTATGCTGCGAAGCAGAATCCAAATTTTGAAACGACAACTCCTTGGTGTAGGCTTCTCTCACAGTTCGGTCAGAACTCCAATGTTGATATTTTCTCGTCAAATTTTACCATTGGTTCTAGTAGAGGTTGCAACTTTCCCTTGAAGGATCACACAATTAGTGGGACACTTTGCAAGATCAAGCACACTCAGCGTGACGGTAGTGCTGTGGCTATGCTTGAAAGTACGGGAGGCAAGGGATCGGTGATGGTTAATGGGTTGACTGTCAAGAAGAGCACCAACTGTGTGCTAAATTCGGGTGACGAGGTGGTCTTTGGTGCTTTGGGGAATCATGCTTATATATTTCAGCAACTTATGAATGAGGTTTCAGTTAAAGGTCTAGATGTTCAGAGTGGTGTTGGAAAATTCTTGCAGCTCGGAAAGAGGACTGGCGATCCGTCTGCTGTGGCCGGGGCCTCGATCTTGGCATCTCTTTCAAGTCTCAGGCAGGATATTTCACGTTGGAAGCCTCCTTCTCAGACCAGCAGTAAAACACACCAAGGTGCTGAACTTCCTTCTAAATCTGTTGCTCATGATGCAATGGAACTTGAAATTGATGCTCTTGAAGGCAACTCAAATCCAGAAGTACGAAATGATAAAGCTGTAGACTCAAGCACAACTAACAGGAATCTTCATCCCGGCTCCAATCCAGATGCTGTCATAGAGGCAGGCAATGTAATGGAAGAAAGAAACCAGTGGATTGGCGAGTTGCAGCCAGCATCAACTTCGGGAATGTCTTTGCGGTGTGCAGCCTTTAAAGAAGATGTTCTTGCAGGGATTGTTGATGGAAGGGACTTAGAAGTTTCATTTGACAACTTTCCATACTATTTGAGTGAGAATACGAAGAATGTGCTTATTGCTGCTTCTTTCATACACTTGAAGCATAAAGAACATTCAAAGTATACCTCAGAATTAAATACGGTGAATCCACGAATTCTACTTTCTGGTCCCGCTGGTTCAGAGATATATCAAGAGATGCTAGCAAAGGCACTTGCCAACTACTATGGTGCTAAGCTACTCATATTTGATAGCCATTCATTTTTGGGCGGTTTATCATCAAAGGAAGCAGAGCTGTTGAAGGATGGAATAAATGCAGCAAAGTCTTGTAGCTGTTCTAAACAGAGTATGGCATCTACTGAGACCACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATGCTCCAAGCTCTTCAAATGCTACTTTATTCACCCCTGATTCCCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTGGGACAGCAAAGAATAACTTTTTAAAAATTGGTGATAGAGTAAGATTTATAGGTTCAGCTTCTGGGGGGATATATCCTACAACATCTCCCTCAAGGGGCCCACCCAATGGAACTCGTGGAAAGGTTGTATTAACTTTTGACAACAACTCTTCGTCAAAAATTGGTGTTAAGTTTGATAAACTTATACCTGATGGAGTTGATCTTGGGGGATATTGTGAAGGAGGCTATGGATATTTCTGTAATGCAACCGATCTTCGTTTGGAGAACTCTGGCGTGGAAGAATTGGATAAGATACTTATTGATATTTTATTTGAGGCGGTATTTAGTGAAAGCAGAAATTCTCCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTCTTGTTGGAAATTTAGACTCCTATTCTACTTTTAAAATTAGACTGGAAAAGCTTCCTGACAATGTTATAGTAATTGGCTCTCATACTCATACTGACAACCGCAAAGAGAAGTCGCATCCTGGTGGCCTGCTTTTCACGAAATTTGGCAGCAATCAAACTGCTCTTCTTGACTTGGCATTTCCGGATAGTTTTGGAAGACTACATGACAGAGGAAAGGAAGTTCCAAAAGCGACAAAACTTCTTACTAAACTATTTCCCAATAAAGTTACAATCCATATGCCGCAGGATGAGGGCCTTCTTGTGTCATGGAAACACCAGTTAGAACGAGATGCCGAAACTCTCAAAATGAAGGGAAATCTGAATCAATTGCGCGTTGTTTTGAGTAGGAGTGGGATGGATTGTGAAGGTTTAGAGACATTATGCATCAAGGATCAAACACTTACGAACGAGAGTGCGGAGAAGGTAGTTGGATGGGCCTTAAGCCATCATTTAATGCAGAATCTAGAAGCCGATCCTGATTCTAGAGTTCTTTTGTCTAGTGAGAGCATTCAATACGGGATCAGCATCTTACAGGCTATCCAGAATGAATCTAAGTGCTTGAAGAAGTCACTTAAGGATGTTGTCACGGAGAATGAATTTGAGAAAAGGCTTTTAGCAGACGTTATCCCACCCAGTGATATAGGAGTCACATTTGATGATATTGGAGCTCTTGAAAATGTGAAGGATACTCTAAAGGAGTTGGTGATGCTTCCTTTACAAAGGCCCGAACTTTTCTGCAAGGGGCAATTGACCAAGCCATGCAAAGGTATTCTGTTATTTGGCCCACCTGGAACAGGTAAGACGATGCTTGCAAAAGCTGTTGCTACTGAAGCTGGTGCAAATTTTATCAACATTTCCATGTCAAGCATTACGTCAAAGTGGTTCGGTGAGGGTGAGAAGTATGTAAAAGCTGTTTTCTCTCTAGCCAGTAAAATTGCCCCAAGTGTTGTATTTGTTGATGAAGTTGACAGCATGTTGGGTCGAAGAGAAAATCCAGGAGAACATGAGGCCATGCGGAAGATGAAAAATGAATTTATGGTGAACTGGGATGGTTTGCGAACAAAGGACACAGAAAGGGTGCTGGTTCTTGCAGCCACAAACAGACCTTTTGACCTTGATGAAGCTGTTATTCGAAGGCTTCCTCGTAGGTTGATGGTGAATTTGCCAGATGCTCCAAACAGAGCAAAAATACTTAAAGTTATTTTGGCAAAAGAAGATTTGTCTCCAGAATTTGATTTTGATTCGGTTGCTAGTATGACAGATGGATACTCTGGGAGTGACCTTAAGAATCTTTGTGTTGCTGCTGCTCACCGTCCAATTAAAGAGATATTGGAGAAGGAAAAAAAGGAGCGAGCTGCAGCTCTTGCAGATGGCAGGCCTGCTCCAGCCCTTAGTGGAAGTGAGGATATTCGGCCTCTAAATATGGATGACTTTAAATATGCTCATGAACGGGTATGTGCGAGTGTTTCGTCGGAGTCTGTAAACATGACAGAGCTGTTACAGTGGAACGAGCTCTACGGTGAAGGGGGTTCTAGGAGAAAGAAGGCTCTTAGTTACTTCATAAGGAAATCACATCAGTTCGCAATGGCGGTCTCATTGAGCGATGTCAAGTCGGCGGCCGGTCTAAAAAAGCTCGACGAGTACCTGCTCAGTCGTAGTTACATTTCTGGGTATCAAGCTTCAAAAGATGATATCGTTGTTTACGAAGCTATCTCCAAACCCGTTTCCAGCGAATATGTCAACGTATCTAGGTGGTTCAATCACATCGAAGCACTCTTGAGAGCCTCTGCTGGTTTTGGAGAGGGTTCTGGCGTTAAGTTCGATGCAGAAGCAATCGCAACCCCACCAGCTGCCGATGCTAAGGCTAGCGCTGATGACGACGATGACGACGATATGGATCTGTTTGGTGAAGAGACTGAAGAGGAAAAGAAGGCTGCCGAAGAGCGCGCAGCTGCCATCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGAAAATCATCAGTTTTGATGGATATCAAGCCTTGGGATGATGAAACGGACATGAAGAAACTTGAAGAGGCCGTAAGAAGTGTTCAGATGGAAGGATTGCTTTGGGGAGCATCCAAACTCGTCCCTGTTGGATATGGTATTAAGAAACTGCAGATAATGCTCACAATTGTTGACGACCTTGTGTCTGTTGACAATCTCATTGAGGAACATTTGACAGTTGAACCCATAAACGAGCATGTCCAGAGTTGTGATATCGTTGCCTTCAACAAAATCTAG | 4326 | 43.97 | MVSTRRSGSLSGSNSKRSSSSEDKPSSPKRQKVENGCGSEKSMPAAENSKELCTAPTVDPGEHGPGGGPIAGVDVGEGVSSLKEDAAPAAVALTTPIAEGTSLVGDKPRSSFSSWSHYAAKQNPNFETTTPWCRLLSQFGQNSNVDIFSSNFTIGSSRGCNFPLKDHTISGTLCKIKHTQRDGSAVAMLESTGGKGSVMVNGLTVKKSTNCVLNSGDEVVFGALGNHAYIFQQLMNEVSVKGLDVQSGVGKFLQLGKRTGDPSAVAGASILASLSSLRQDISRWKPPSQTSSKTHQGAELPSKSVAHDAMELEIDALEGNSNPEVRNDKAVDSSTTNRNLHPGSNPDAVIEAGNVMEERNQWIGELQPASTSGMSLRCAAFKEDVLAGIVDGRDLEVSFDNFPYYLSENTKNVLIAASFIHLKHKEHSKYTSELNTVNPRILLSGPAGSEIYQEMLAKALANYYGAKLLIFDSHSFLGGLSSKEAELLKDGINAAKSCSCSKQSMASTETTKNTDQVTGEEDAPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNFLKIGDRVRFIGSASGGIYPTTSPSRGPPNGTRGKVVLTFDNNSSSKIGVKFDKLIPDGVDLGGYCEGGYGYFCNATDLRLENSGVEELDKILIDILFEAVFSESRNSPFILFMKDAEKSLVGNLDSYSTFKIRLEKLPDNVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKATKLLTKLFPNKVTIHMPQDEGLLVSWKHQLERDAETLKMKGNLNQLRVVLSRSGMDCEGLETLCIKDQTLTNESAEKVVGWALSHHLMQNLEADPDSRVLLSSESIQYGISILQAIQNESKCLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPEFDFDSVASMTDGYSGSDLKNLCVAAAHRPIKEILEKEKKERAAALADGRPAPALSGSEDIRPLNMDDFKYAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFIRKSHQFAMAVSLSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIVVYEAISKPVSSEYVNVSRWFNHIEALLRASAGFGEGSGVKFDAEAIATPPAADAKASADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKI | 1441 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3967429 | 3984389 | - | CePI673135_03g003550.1 | Cec03g0355 | 197979 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 326 | 343 | - | - | |
Cec03g0355 | 1441 | SUPERFAMILY | SMAD/FHA domain | 131 | 229 | IPR008984 | GO:0005515(InterPro) | |
Cec03g0355 | 1441 | Gene3D | - | 1345 | 1441 | IPR014717 | - | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 282 | 302 | - | - | |
Cec03g0355 | 1441 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 144 | 1208 | IPR051701 | GO:0005741(PANTHER) | |
Cec03g0355 | 1441 | SMART | EF1_GNE_2 | 1352 | 1441 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cec03g0355 | 1441 | Pfam | ATPase family associated with various cellular activities (AAA) | 945 | 1075 | IPR003959 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 22 | 36 | - | - | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 316 | 347 | - | - | |
Cec03g0355 | 1441 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 1430 | 1441 | IPR001326 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 1304 | 1335 | - | - | |
Cec03g0355 | 1441 | ProSitePatterns | AAA-protein family signature. | 1048 | 1067 | IPR003960 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Cec03g0355 | 1441 | Gene3D | - | 1077 | 1171 | - | - | |
Cec03g0355 | 1441 | Pfam | EF-1 guanine nucleotide exchange domain | 1354 | 1441 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cec03g0355 | 1441 | Pfam | FHA domain | 153 | 222 | IPR000253 | GO:0005515(InterPro) | |
Cec03g0355 | 1441 | CDD | EF1B | 1350 | 1441 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cec03g0355 | 1441 | CDD | RecA-like_ATAD1 | 908 | 1074 | - | - | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cec03g0355 | 1441 | FunFam | Elongation factor 1-beta 1 like | 1346 | 1441 | - | - | |
Cec03g0355 | 1441 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein | 903 | 1079 | - | - | |
Cec03g0355 | 1441 | Pfam | AAA+ lid domain | 1099 | 1134 | IPR041569 | - | |
Cec03g0355 | 1441 | Gene3D | - | 903 | 1184 | IPR027417 | - | |
Cec03g0355 | 1441 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 1316 | 1324 | IPR001326 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cec03g0355 | 1441 | Gene3D | - | 131 | 240 | - | - | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 503 | 549 | - | - | |
Cec03g0355 | 1441 | CDD | FHA | 134 | 232 | - | - | |
Cec03g0355 | 1441 | Coils | Coil | 1324 | 1344 | - | - | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 1311 | 1325 | - | - | |
Cec03g0355 | 1441 | MobiDBLite | consensus disorder prediction | 282 | 299 | - | - | |
Cec03g0355 | 1441 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 904 | 1185 | IPR027417 | - | |
Cec03g0355 | 1441 | SUPERFAMILY | eEF-1beta-like | 1349 | 1441 | IPR036219 | - | |
Cec03g0355 | 1441 | SMART | AAA_5 | 941 | 1078 | IPR003593 | GO:0016887(InterPro) | |
Cec03g0355 | 1441 | Gene3D | - | 1190 | 1286 | - | - | |
Cec03g0355 | 1441 | SUPERFAMILY | GST C-terminal domain-like | 1184 | 1282 | IPR036282 | - | |
Cec03g0355 | 1441 | FunFam | Elongation factor 1-delta 1 | 1219 | 1294 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0021 | Cec-Chr1:167932 | Cec03g0355 | Cec-Chr3:3967429 | 1.00E-78 | dispersed | |
Cec01g0083 | Cec-Chr1:693326 | Cec03g0355 | Cec-Chr3:3967429 | 1.10E-144 | dispersed | |
Cec03g0355 | Cec-Chr3:3967429 | Cec09g0575 | Cec-Chr9:4971606 | 0.00E+00 | dispersed | |
Cec03g0355 | Cec-Chr3:3967429 | Cec07g0855 | Cec-Chr7:20997626 | 3.70E-161 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0355 | - | - | - | 0.0 |