Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0382 ATGGCAGCTTTTTCTTATCAATACCAACCCTTTCTTCTTGACTCCATTTTCATGCCCAACAATCCTCTCAAAATGGGAGGCTTTTTTGATGACCAAAATTTCAACACAAATTGTTTCTCTCAATTTTACCCTCAAGACCAACAACAACAACAACAACAACAACAACAACCCATTTACCATTTTCCTGACCTCTCTAAACAAAGCCCTGAATCTTCCACTTTGGTCGACCGATCCGACAGCGCCGAACCGCAGGTCGGAAATCAGTTGAAACCGGCTGTTACGGTTACCGTAACTTCCCCTTGTACTAAGAAAAGGAAGAGCCGGAATAATTCTTCCGCCACCTCCGCTCAATCCAAGGGTACTACTGACAGCACTGCGAAAAAGCAGAAAAGTAAAGGGGAATACGAAGGGAAAGAAAAAGATCATCAAAAGGCTAAAAATGGGAAGAAATTAGAGGAGAAAAAAATTTTAGAAGAAGGTGGTGCAACCACTGGTTACATTCATGTTAGAGCTAGAAGGGGCCAAGCCACTGACAGCCACAGTCTTGCTGAGAGGGTGAGAAGGGAGAAGATTAGCGTAAGGATGAAGACATTGCAACGCCTTGTTCCCGGTTGCGACAAGGTTACAGGAAAGGCCCTTATGTTGGATGAAATTATCAATTATGTTCAGTCCCTACAAAATCAAGTTGAGTTTCTCTCCATGAAACTCGCTTCTTTGAACCCAATTTTCTTCGACTTCAGAATGGACTTGGACGGCCTAATGATCCAACCAGAGATGACGTCGTTGAGTAGCATAACACCACAACTTCCAGCGATGGCACAATGTAGCATCGTGGCACCACCGGCGTTGATCGACACGACCCCTTCGACGACTCCATCTCCGGCAATCTCCGCCGCAAATAGTTTTCCCTTAATGGACTCTTCAGCTAATTTGTTTCTATTTCAACAAGGGATAAGCCCAAATAATGGCTACTCCCAATCGTCACAGGATAACGTTAAAGTTTCATCATGGGATGTCGAAGACCAGAAACGAAAGCTTCTTATTTCATCAGGAATTGGCGACAACGTATGTTACTTCCATTAA 1083 43.86 MAAFSYQYQPFLLDSIFMPNNPLKMGGFFDDQNFNTNCFSQFYPQDQQQQQQQQQQPIYHFPDLSKQSPESSTLVDRSDSAEPQVGNQLKPAVTVTVTSPCTKKRKSRNNSSATSAQSKGTTDSTAKKQKSKGEYEGKEKDHQKAKNGKKLEEKKILEEGGATTGYIHVRARRGQATDSHSLAERVRREKISVRMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRMDLDGLMIQPEMTSLSSITPQLPAMAQCSIVAPPALIDTTPSTTPSPAISAANSFPLMDSSANLFLFQQGISPNNGYSQSSQDNVKVSSWDVEDQKRKLLISSGIGDNVCYFH 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4272660 4274391 - CePI673135_03g003820.1 Cec03g0382 198006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0382 360 Gene3D - 172 242 IPR036638 GO:0046983(InterPro)
Cec03g0382 360 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 225 IPR011598 GO:0046983(InterPro)
Cec03g0382 360 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 241 IPR036638 GO:0046983(InterPro)
Cec03g0382 360 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 35 316 IPR024097 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)
Cec03g0382 360 SMART finulus 181 231 IPR011598 GO:0046983(InterPro)
Cec03g0382 360 FunFam Basic helix-loop-helix transcription factor 172 244 - -
Cec03g0382 360 Pfam Helix-loop-helix DNA-binding domain 179 226 IPR011598 GO:0046983(InterPro)
Cec03g0382 360 CDD bHLH_AtBPE_like 165 250 - -
Cec03g0382 360 MobiDBLite consensus disorder prediction 125 156 - -
Cec03g0382 360 MobiDBLite consensus disorder prediction 62 124 - -
Cec03g0382 360 MobiDBLite consensus disorder prediction 62 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0382 Cec-Chr3:4272660 Cec09g0837 Cec-Chr9:7777346 8.10E-33 dispersed
Cec03g0382 Cec-Chr3:4272660 Cec06g2019 Cec-Chr6:33329021 1.00E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29186 PF00010 HLH 4.40E-06 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0382 - - - 0.0