Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0408 ATGGCGTCAAGAATCAAAACTGGTGAGGATAGTGACGATAAAGATAGTAGCATCTGGGTTTTGGATCACCAGATGGACCAGCCAATGGAGGAGGAGGCTAGCCGGCTAAGAAATGCGCATCAGGAAAAGGGTCATTCTGTATTTAAAATTCTACAACTTGCATTCCAAAGCCTTGGAATAGTGTACGGAGATTTGGGCACTTCCCCTTTATATGTCTTCTATAACACGTTCCCCGATGGAATTGAAAATACAGAGGACTTGATAGGAGCTCTGTCATTGATTATATACTCTCTGACTCTCATAACCCTTATCAAGTACGTATTTATAGTCTGCAAGGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTATATTCATTGCTAAGCCGTCATGCTAAAATATTAACTATCCCTAACCATGACCTCAGTGATGAGAAGCTTACAACTTATAGTCGTTCTAAGTATCGGGAACAATCATTTGCTGCAAAAACTAAGAGATGGCTGGAAGGGCATCATTTTAAGAAACATGCAATTCTTGTTCTCGTTCTTGTTGGCTCCTGCATGGTGATTGGGGATGGAATCCTAACACCTGCTATTTCAGTTCTTTCTGCTGTTGGGGGGATCAACGTTGGTCATGCAAAAATAAGCAATGATGTAGCTGTTCTTGTTGCTATTGTCATACTTGTGTTCTTGTTTAGCATGCAACGTTATGGCACAGATAAAGTCGGTTGGCTTTTTGCCCCGGTAGTTTTTCTGTGGTTCACCTTAATAGGAGGCATCGGTATATTTAACATCTGCAAATATGATCACAGTGCCCTGAGAGCCTTTTCTCCAGTATATATATATCGGTACTTCAAACGGGGAGGGAAAGCTGGATGGACATCCCTTGGAGGGATCATGCTTAGTATTACAGGAACTGAAGCACTTTTTGCAGACCTATCCCATTTTCCAGTTTCCTCTATACAAATTGCTTTTACAGTAGTTGTATTTCCTTGCCTTCTTCTAGCCTACGCTGGGCAAGTTGCCTATCTCATGAAAAACCCAGATTATGTTATCGGTGCCTTCTACCATTCAATCCCAGAAAGTATATATTGGCCAGTATTTCTTGTTGCAACTACCGCCGCTATCGTTGCAAGCCAAGCCACCATATCTGCAACCTTTTCATTAGTCAAGCAAGCCCTTGCACTTGGTTGCTTTCCAAGAGTTAAAGTTGTTCATACTTCTACGACTTTCCGTAATCAGATATATATTCCTGATATTAATTGGATCCTGATGATTCTTTGCATTGCCGTGACAGCTGGGTTCAAAAATCAAAGCCAAATTGGAAATGCTTCGGGGACAGCAGTGATTATAGTGATGTTGGTGACCACATTCCTCATGACTTTAATAATGATATTAGTGTGGCACTCCCACTGGTCTCTAGTTCTTCTCTTCACTTGCTTATCACTCCTTGTGGAGGGTTTCTACCTCTCCTCAGTTATTCAGAAGGTTTATCAAGGTGGGTGGGTTCCCTTGGTTATAGCAACAGCATTTTTCATCATCATGTACATTTGGCATTATGGTACAGCTAAACGTTATGAAATTGAGATGCACACTAAGGTTTCAATGGCATGGATTCTTAGCCTTGGCCCCAGTTTAGGACTTGTAAGGGTGCCTGGGATAGGACTTGTGTACACAGAACTAGCAAGTGGAGTCCCCCACATCTTTTCGCACTTCGTCACAAACTTACCCGCCATTCATTCGGTTGTGGTCTTTGTTTGTTTGAAGTGTTTGCCTGTCCACACAGTCCCAGAAGAAGAAAGATTTCTAGTAAAACGGATTGGACCTAAGAATTTTTGCATGTTTCGGTGTGTGGCTAGATATGGTTACAAAGACCTTCACAAGAAAGATGATGATTTTGAGAAGAAACTCTTTGATAGTATCTTCTTGTTTGTTCGACTCGAGTCATTGATGGATGGTGGATCTTCAGATTCGGACGTGTCTAGCCTACTTGATCAACAGGATGAAACAATTACAGAATATGCATTGAACACCATTAATTCAACTTGCTCAACTGTCGAATCAACAGGCCTACGAACAGCAGATTCGATTGAGCTTGCCAATTCTCCATTGCATCAGAACCAAGCCATCATAACACCTAGTCAAGAAAATGGTCAGACTGTGACAGACGAGTTAGAATTCTTGGTTAGCTGTAAAAATGTTGGAGTTGTACACATTCTTGGAAATACAGTAATGAAAGCTAGGAGGGACTCCAGATTATGCAAAAGGATCTCAATTGATTATATATATGCATTTCTTAGGAAGATCTGCAGGGAGAACAGCGTGATGTTCAATGTTCCTCATGAGAGTTTGCTTAATGTTGGCCAAACATTCTATGTATGA 2382 41.27 MASRIKTGEDSDDKDSSIWVLDHQMDQPMEEEASRLRNAHQEKGHSVFKILQLAFQSLGIVYGDLGTSPLYVFYNTFPDGIENTEDLIGALSLIIYSLTLITLIKYVFIVCKANDNGQGGTFALYSLLSRHAKILTIPNHDLSDEKLTTYSRSKYREQSFAAKTKRWLEGHHFKKHAILVLVLVGSCMVIGDGILTPAISVLSAVGGINVGHAKISNDVAVLVAIVILVFLFSMQRYGTDKVGWLFAPVVFLWFTLIGGIGIFNICKYDHSALRAFSPVYIYRYFKRGGKAGWTSLGGIMLSITGTEALFADLSHFPVSSIQIAFTVVVFPCLLLAYAGQVAYLMKNPDYVIGAFYHSIPESIYWPVFLVATTAAIVASQATISATFSLVKQALALGCFPRVKVVHTSTTFRNQIYIPDINWILMILCIAVTAGFKNQSQIGNASGTAVIIVMLVTTFLMTLIMILVWHSHWSLVLLFTCLSLLVEGFYLSSVIQKVYQGGWVPLVIATAFFIIMYIWHYGTAKRYEIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELASGVPHIFSHFVTNLPAIHSVVVFVCLKCLPVHTVPEEERFLVKRIGPKNFCMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESLMDGGSSDSDVSSLLDQQDETITEYALNTINSTCSTVESTGLRTADSIELANSPLHQNQAIITPSQENGQTVTDELEFLVSCKNVGVVHILGNTVMKARRDSRLCKRISIDYIYAFLRKICRENSVMFNVPHESLLNVGQTFYV 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4490342 4494745 - CePI673135_03g004080.1 Cec03g0408 198032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0408 793 Pfam K+ potassium transporter C-terminal domain 552 790 IPR053952 -
Cec03g0408 793 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 792 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cec03g0408 793 Pfam K+ potassium transporter integral membrane domain 53 540 IPR053951 -
Cec03g0408 793 NCBIfam potassium uptake protein 53 792 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0408 Cec-Chr3:4490342 Cec05g1406 Cec-Chr5:15896246 4.00E-202 dispersed
Cec03g0408 Cec-Chr3:4490342 Cec03g0410 Cec-Chr3:4499964 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0408 K03549 - csv:101217671 1375.92