Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0484 ATGCTGAATTTGGCCAATATTTTCGTCTTCCTCCTCTGTTTCCATATCCATGGACACGCTCAAACTCTTTACATTTGCTTACCCAACAACAACTTCACTTCCAATAGCACCTACCAGTCCAGCCTTAATCTCCTCTTTTCAACTCTCTCCACCAACGCCCCAGGAACCAACGGATTCTTCAATTCTTCCGTCGTCCGTACACCAAGCGACACCGTTTACGGCGTCTTCCAGTGCCGTGGAGACACCACCGACGGCTCCTGCCGTGATTGCGTAATGGAAGCCACCAGAAACATAGCCCATCAATTCTGTCCCTTTAGGAAAAACGCTGTGGTTTGGTATGACGATTGTATGTTGCGTTATTCCGACCAATTTTTCTTTTCTCTTGTGTCCACTGAGCCAAATTACGTCTTAGATAGCCGCGTTAATATTGGGTTCGACACGGCCCGGTTTAACCAAGTGTTGATGGCCACGTTGACTGCCACGGCGGCTAATGCCTCCTCGTTGGTAGTGGGGGAAATGTTTGCAACACAAGAGGTGATTTTCACATCAAACACAACGCTTTACACGTTGGCACAGTGCAATTCGGATTTGTCAAATACGAATTGCCAAGATTGCTTAATGCGAGTAATTAGGGGTATTCCTCGTTGTTGTACTAATAGAAATGGTGGGAGAATTTTGTTTCCAAGCTGTTATGTTCGTTACGAACTTTATCCATTTTACCAACTCACTAGGACTAAACCGGTAACAACTGATCCTCCACCACCACCTCCTACCTCAGGGGGAAGCAAATCCTCGAAGATGATAATTATAGCCATCGTGGTTCCAATTACTGCTTCCATTCTACTCTTGGTTTTGGGCTTCAATGTCCTCCGTAGAGCAAAGAGGAAATACATTACAGTTAAGGAAGATATTGTTAATGAGATGACGACTGTGGAATCTCTGCAATTTGATTTCAAAACAATCGAAGCTGCTACTAACAAATTCTCAGAGGAAAACAGGTTGGGAGAAGGTGGATTTGGTGCTGTCTTCAAGGGTAGGCTTGAAAATGGACAAGAGATAGCAGTGAAGAGGCTGTCAAGAGGTTCTTTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTTATGTTGGTTGCTAAGCTTCAACATAGAAATCTTGTAAGGTTATTGGGATTCTGCTTGGAGGGGGAAGAAAAGATTCTCATCTATGAATACATTCCCAACAAAAGCCTTGACTTTTTCTTGTTTGATCTAGAGGGACAGAGGCAGTTGGATTGGTTGAAACGATATAAGATCATCAATGGAATTGCTCGAGGAATATTGTATCTGCACGAAGATTCTCGTCTTAGAATTATTCACCGTGATCTTAAAGCGAGTAACATCTTGTTAGACAAAGATATGAATGCAAAAATTTCAGACTTTGGTATGGCAAGGATTATTCAAATTGATCAAACCCAAGGAAATACAAGTAGGATTGTTGGTACCTATGGTTACATGTCTCCTGAGTATGCAATGCACGGAAATTTCTCAATGAAATCTGATGTGTATAGCTTTGGAGTATTAGTGTTAGAGATTTTAAGTGGTAAGAAAAACAACACCTTTTACTTGTCAGATCTTGCCGAAGACATTTTGACATATGCTTGGAAATTGTGGAAGGATGGAACGCCATTAGAGTTATTGGATCCAATGTTGAGAGATAACTACTCGAGAAATGAGGTGGTTAGATGCATTCATATTGCTTTATTATGTGTTCAAGAGGATCCTAACAGCAGACCTTCCATGGCTTCCATTGTTCTTATGCTTAATAGTTATTCCGTTACTTTGCCATTGCCTGAAGAGCCAGCGTTCTTCATGCGTAGTAAAGACAATCACATTACAATGGGCAGCGATCATTCTACTAATAAGTCTATTCAGTTTTCTGTCAATGAAACATCTATATCTGAGTTGCATCCACGATGA 1953 41.58 MLNLANIFVFLLCFHIHGHAQTLYICLPNNNFTSNSTYQSSLNLLFSTLSTNAPGTNGFFNSSVVRTPSDTVYGVFQCRGDTTDGSCRDCVMEATRNIAHQFCPFRKNAVVWYDDCMLRYSDQFFFSLVSTEPNYVLDSRVNIGFDTARFNQVLMATLTATAANASSLVVGEMFATQEVIFTSNTTLYTLAQCNSDLSNTNCQDCLMRVIRGIPRCCTNRNGGRILFPSCYVRYELYPFYQLTRTKPVTTDPPPPPPTSGGSKSSKMIIIAIVVPITASILLLVLGFNVLRRAKRKYITVKEDIVNEMTTVESLQFDFKTIEAATNKFSEENRLGEGGFGAVFKGRLENGQEIAVKRLSRGSLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKILIYEYIPNKSLDFFLFDLEGQRQLDWLKRYKIINGIARGILYLHEDSRLRIIHRDLKASNILLDKDMNAKISDFGMARIIQIDQTQGNTSRIVGTYGYMSPEYAMHGNFSMKSDVYSFGVLVLEILSGKKNNTFYLSDLAEDILTYAWKLWKDGTPLELLDPMLRDNYSRNEVVRCIHIALLCVQEDPNSRPSMASIVLMLNSYSVTLPLPEEPAFFMRSKDNHITMGSDHSTNKSIQFSVNETSISELHPR 650
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 5132788 5145609 + CePI673135_03g004840.1 Cec03g0484 198108
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0484 650 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524(InterPro)
Cec03g0484 650 FunFam cysteine-rich receptor-like protein kinase 10 404 606 - -
Cec03g0484 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0484 650 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 20 125 - -
Cec03g0484 650 ProSiteProfiles Gnk2-homologous domain profile. 20 125 IPR002902 -
Cec03g0484 650 Gene3D Transferase(Phosphotransferase) domain 1 404 606 - -
Cec03g0484 650 FunFam Cysteine-rich receptor-like protein kinase 10 291 403 - -
Cec03g0484 650 Gene3D Phosphorylase Kinase; domain 1 290 403 - -
Cec03g0484 650 FunFam Cysteine-rich receptor-like protein kinase 10 134 239 - -
Cec03g0484 650 CDD STKc_IRAK 334 600 - -
Cec03g0484 650 ProSiteProfiles Protein kinase domain profile. 328 603 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0484 650 Pfam Protein tyrosine and serine/threonine kinase 331 597 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0484 650 SMART serkin_6 328 603 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0484 650 Gene3D - 19 125 IPR038408 -
Cec03g0484 650 Gene3D - 139 239 IPR038408 -
Cec03g0484 650 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 67 615 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Cec03g0484 650 Pfam Salt stress response/antifungal 148 236 IPR002902 -
Cec03g0484 650 Pfam Salt stress response/antifungal 26 123 IPR002902 -
Cec03g0484 650 SUPERFAMILY Protein kinase-like (PK-like) 313 632 IPR011009 -
Cec03g0484 650 ProSiteProfiles Gnk2-homologous domain profile. 131 239 IPR002902 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0179 Cec-Chr2:1711749 Cec03g0484 Cec-Chr3:5132788 3.50E-30 dispersed
Cec03g0484 Cec-Chr3:5132788 Cec04g1934 Cec-Chr4:37698060 1.00E-142 dispersed
Cec03g0486 Cec-Chr3:5157377 Cec03g0484 Cec-Chr3:5132788 3.30E-48 dispersed
Cec04g1737 Cec-Chr4:36411106 Cec03g0484 Cec-Chr3:5132788 4.00E-06 dispersed
Cec05g0456 Cec-Chr5:3684278 Cec03g0484 Cec-Chr3:5132788 8.10E-13 dispersed
Cec06g0755 Cec-Chr6:8815306 Cec03g0484 Cec-Chr3:5132788 4.60E-13 dispersed
Cec07g0655 Cec-Chr7:10160294 Cec03g0484 Cec-Chr3:5132788 7.90E-10 dispersed
Cec03g0484 Cec-Chr3:5132788 Cec03g0485 Cec-Chr3:5153267 2.20E-42 tandem
Cec07g0667 Cec-Chr7:10948538 Cec03g0484 Cec-Chr3:5132788 3.40E-86 transposed
Cec03g0484 Cec-Chr3:5132788 Cec04g1932 Cec-Chr4:37671926 3.30E-125 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71814 PF07714 PK_Tyr_Ser-Thr 2.00E-49 CL0016 Cec PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0484 - - - 0.0