Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0484 | ATGCTGAATTTGGCCAATATTTTCGTCTTCCTCCTCTGTTTCCATATCCATGGACACGCTCAAACTCTTTACATTTGCTTACCCAACAACAACTTCACTTCCAATAGCACCTACCAGTCCAGCCTTAATCTCCTCTTTTCAACTCTCTCCACCAACGCCCCAGGAACCAACGGATTCTTCAATTCTTCCGTCGTCCGTACACCAAGCGACACCGTTTACGGCGTCTTCCAGTGCCGTGGAGACACCACCGACGGCTCCTGCCGTGATTGCGTAATGGAAGCCACCAGAAACATAGCCCATCAATTCTGTCCCTTTAGGAAAAACGCTGTGGTTTGGTATGACGATTGTATGTTGCGTTATTCCGACCAATTTTTCTTTTCTCTTGTGTCCACTGAGCCAAATTACGTCTTAGATAGCCGCGTTAATATTGGGTTCGACACGGCCCGGTTTAACCAAGTGTTGATGGCCACGTTGACTGCCACGGCGGCTAATGCCTCCTCGTTGGTAGTGGGGGAAATGTTTGCAACACAAGAGGTGATTTTCACATCAAACACAACGCTTTACACGTTGGCACAGTGCAATTCGGATTTGTCAAATACGAATTGCCAAGATTGCTTAATGCGAGTAATTAGGGGTATTCCTCGTTGTTGTACTAATAGAAATGGTGGGAGAATTTTGTTTCCAAGCTGTTATGTTCGTTACGAACTTTATCCATTTTACCAACTCACTAGGACTAAACCGGTAACAACTGATCCTCCACCACCACCTCCTACCTCAGGGGGAAGCAAATCCTCGAAGATGATAATTATAGCCATCGTGGTTCCAATTACTGCTTCCATTCTACTCTTGGTTTTGGGCTTCAATGTCCTCCGTAGAGCAAAGAGGAAATACATTACAGTTAAGGAAGATATTGTTAATGAGATGACGACTGTGGAATCTCTGCAATTTGATTTCAAAACAATCGAAGCTGCTACTAACAAATTCTCAGAGGAAAACAGGTTGGGAGAAGGTGGATTTGGTGCTGTCTTCAAGGGTAGGCTTGAAAATGGACAAGAGATAGCAGTGAAGAGGCTGTCAAGAGGTTCTTTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTTATGTTGGTTGCTAAGCTTCAACATAGAAATCTTGTAAGGTTATTGGGATTCTGCTTGGAGGGGGAAGAAAAGATTCTCATCTATGAATACATTCCCAACAAAAGCCTTGACTTTTTCTTGTTTGATCTAGAGGGACAGAGGCAGTTGGATTGGTTGAAACGATATAAGATCATCAATGGAATTGCTCGAGGAATATTGTATCTGCACGAAGATTCTCGTCTTAGAATTATTCACCGTGATCTTAAAGCGAGTAACATCTTGTTAGACAAAGATATGAATGCAAAAATTTCAGACTTTGGTATGGCAAGGATTATTCAAATTGATCAAACCCAAGGAAATACAAGTAGGATTGTTGGTACCTATGGTTACATGTCTCCTGAGTATGCAATGCACGGAAATTTCTCAATGAAATCTGATGTGTATAGCTTTGGAGTATTAGTGTTAGAGATTTTAAGTGGTAAGAAAAACAACACCTTTTACTTGTCAGATCTTGCCGAAGACATTTTGACATATGCTTGGAAATTGTGGAAGGATGGAACGCCATTAGAGTTATTGGATCCAATGTTGAGAGATAACTACTCGAGAAATGAGGTGGTTAGATGCATTCATATTGCTTTATTATGTGTTCAAGAGGATCCTAACAGCAGACCTTCCATGGCTTCCATTGTTCTTATGCTTAATAGTTATTCCGTTACTTTGCCATTGCCTGAAGAGCCAGCGTTCTTCATGCGTAGTAAAGACAATCACATTACAATGGGCAGCGATCATTCTACTAATAAGTCTATTCAGTTTTCTGTCAATGAAACATCTATATCTGAGTTGCATCCACGATGA | 1953 | 41.58 | MLNLANIFVFLLCFHIHGHAQTLYICLPNNNFTSNSTYQSSLNLLFSTLSTNAPGTNGFFNSSVVRTPSDTVYGVFQCRGDTTDGSCRDCVMEATRNIAHQFCPFRKNAVVWYDDCMLRYSDQFFFSLVSTEPNYVLDSRVNIGFDTARFNQVLMATLTATAANASSLVVGEMFATQEVIFTSNTTLYTLAQCNSDLSNTNCQDCLMRVIRGIPRCCTNRNGGRILFPSCYVRYELYPFYQLTRTKPVTTDPPPPPPTSGGSKSSKMIIIAIVVPITASILLLVLGFNVLRRAKRKYITVKEDIVNEMTTVESLQFDFKTIEAATNKFSEENRLGEGGFGAVFKGRLENGQEIAVKRLSRGSLQGSEEFKNEVMLVAKLQHRNLVRLLGFCLEGEEKILIYEYIPNKSLDFFLFDLEGQRQLDWLKRYKIINGIARGILYLHEDSRLRIIHRDLKASNILLDKDMNAKISDFGMARIIQIDQTQGNTSRIVGTYGYMSPEYAMHGNFSMKSDVYSFGVLVLEILSGKKNNTFYLSDLAEDILTYAWKLWKDGTPLELLDPMLRDNYSRNEVVRCIHIALLCVQEDPNSRPSMASIVLMLNSYSVTLPLPEEPAFFMRSKDNHITMGSDHSTNKSIQFSVNETSISELHPR | 650 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5132788 | 5145609 | + | CePI673135_03g004840.1 | Cec03g0484 | 198108 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0484 | 650 | ProSitePatterns | Protein kinases ATP-binding region signature. | 334 | 356 | IPR017441 | GO:0005524(InterPro) | |
Cec03g0484 | 650 | FunFam | cysteine-rich receptor-like protein kinase 10 | 404 | 606 | - | - | |
Cec03g0484 | 650 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 449 | 461 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g0484 | 650 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 20 | 125 | - | - | |
Cec03g0484 | 650 | ProSiteProfiles | Gnk2-homologous domain profile. | 20 | 125 | IPR002902 | - | |
Cec03g0484 | 650 | Gene3D | Transferase(Phosphotransferase) domain 1 | 404 | 606 | - | - | |
Cec03g0484 | 650 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 291 | 403 | - | - | |
Cec03g0484 | 650 | Gene3D | Phosphorylase Kinase; domain 1 | 290 | 403 | - | - | |
Cec03g0484 | 650 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 134 | 239 | - | - | |
Cec03g0484 | 650 | CDD | STKc_IRAK | 334 | 600 | - | - | |
Cec03g0484 | 650 | ProSiteProfiles | Protein kinase domain profile. | 328 | 603 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0484 | 650 | Pfam | Protein tyrosine and serine/threonine kinase | 331 | 597 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g0484 | 650 | SMART | serkin_6 | 328 | 603 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0484 | 650 | Gene3D | - | 19 | 125 | IPR038408 | - | |
Cec03g0484 | 650 | Gene3D | - | 139 | 239 | IPR038408 | - | |
Cec03g0484 | 650 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 67 | 615 | - | GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER) | |
Cec03g0484 | 650 | Pfam | Salt stress response/antifungal | 148 | 236 | IPR002902 | - | |
Cec03g0484 | 650 | Pfam | Salt stress response/antifungal | 26 | 123 | IPR002902 | - | |
Cec03g0484 | 650 | SUPERFAMILY | Protein kinase-like (PK-like) | 313 | 632 | IPR011009 | - | |
Cec03g0484 | 650 | ProSiteProfiles | Gnk2-homologous domain profile. | 131 | 239 | IPR002902 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0179 | Cec-Chr2:1711749 | Cec03g0484 | Cec-Chr3:5132788 | 3.50E-30 | dispersed | |
Cec03g0484 | Cec-Chr3:5132788 | Cec04g1934 | Cec-Chr4:37698060 | 1.00E-142 | dispersed | |
Cec03g0486 | Cec-Chr3:5157377 | Cec03g0484 | Cec-Chr3:5132788 | 3.30E-48 | dispersed | |
Cec04g1737 | Cec-Chr4:36411106 | Cec03g0484 | Cec-Chr3:5132788 | 4.00E-06 | dispersed | |
Cec05g0456 | Cec-Chr5:3684278 | Cec03g0484 | Cec-Chr3:5132788 | 8.10E-13 | dispersed | |
Cec06g0755 | Cec-Chr6:8815306 | Cec03g0484 | Cec-Chr3:5132788 | 4.60E-13 | dispersed | |
Cec07g0655 | Cec-Chr7:10160294 | Cec03g0484 | Cec-Chr3:5132788 | 7.90E-10 | dispersed | |
Cec03g0484 | Cec-Chr3:5132788 | Cec03g0485 | Cec-Chr3:5153267 | 2.20E-42 | tandem | |
Cec07g0667 | Cec-Chr7:10948538 | Cec03g0484 | Cec-Chr3:5132788 | 3.40E-86 | transposed | |
Cec03g0484 | Cec-Chr3:5132788 | Cec04g1932 | Cec-Chr4:37671926 | 3.30E-125 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71814 | PF07714 | PK_Tyr_Ser-Thr | 2.00E-49 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0484 | - | - | - | 0.0 |