Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0489 ATGTTCCACTCAAGCCTTCTCTTTTCTATCATCATCTTCTCCTTCTTCCTCTTCATCAGCCCTGCAATTCCTCAGCCAAATACCAATTGTTCAAACGACAATGACAATTGCACAGCCAGCAGCACCTACAGAGCCACAATTATTACACCCAAATGTAATCTTGGCTATGAGATTATCAATTTCTTTGACTCTGCAGCTGTTTCCAGAGTTTCTCGGTCGACCTCGCCGCCGACACCGTCATCCCCTCTCTTGCCACTCTCACCTACATCTCGTTCACCAAATACAACAACCAATGTCAAAGGTTTACAAGTGGATGACACTGCAGATTTTGAAACTTTGGTATTTGACACCAGTACTATAAGAACTGCAATAGATGACTTCTCAGATGAAAATTATATTGGAGAAGGTAGATTTGGAGCTGTTTACAAGGGAAGCCTTGTTAATGGACAAGAAATAGCAGTGAAGTTTCTCAAACAGAACCCCATGGAAGGAGAGGGTGAGTTTCAGAATGCAGTCCTGTCAATGGCCAAACTTCAACACTGGAATTTAGTTCGGTTTCTCGGTTTCTGCCTCCACAAAGACATGATGATTTTCGTGTCCGAGTTCGTGCAAAACTCAAGTCTTGATAAATTCATATTTGAGCCATTGAAAGGTCAAGATTTGGACTGGGGAACGCGCTACAAAATCATTCAAGGCATTGCTACAGGCCTTGTTTATCTTCATCAAGATTCTCAAATTAAAGTTGTTCATAGAGATCTCAAAGCTACAAATATTTTATTAGATGCACAAATGAATCCTAAAATTTCTGATTTTTTCATGGTATGGAGAAACTGGAGGGCAGGAACAATACTAAATGTTGTAGATCCTATATTGCGAGGTGGGTCAAGTAATGAAATAAAGAAATGTATCAACATTGGATTGCTTTGTGCTCAAGAAAATAAAGCTAACAGGCCAACTATGGAAACAGTACTTCTCATGCTTAATAGTGACACAATCACTCTACCAATACTTTCTCCGCTAGGTGATTACATGAATAGGAGTCCCAAATCGGACATGTCTTCTTCACAAGAGAGGTCTTCTTCCCATGTAATAGAGATAGAATGA 1104 39.95 MFHSSLLFSIIIFSFFLFISPAIPQPNTNCSNDNDNCTASSTYRATIITPKCNLGYEIINFFDSAAVSRVSRSTSPPTPSSPLLPLSPTSRSPNTTTNVKGLQVDDTADFETLVFDTSTIRTAIDDFSDENYIGEGRFGAVYKGSLVNGQEIAVKFLKQNPMEGEGEFQNAVLSMAKLQHWNLVRFLGFCLHKDMMIFVSEFVQNSSLDKFIFEPLKGQDLDWGTRYKIIQGIATGLVYLHQDSQIKVVHRDLKATNILLDAQMNPKISDFFMVWRNWRAGTILNVVDPILRGGSSNEIKKCINIGLLCAQENKANRPTMETVLLMLNSDTITLPILSPLGDYMNRSPKSDMSSSQERSSSHVIEIE 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5170258 5172328 + CePI673135_03g004890.1 Cec03g0489 198113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0489 367 SUPERFAMILY Protein kinase-like (PK-like) 107 327 IPR011009 -
Cec03g0489 367 MobiDBLite consensus disorder prediction 345 367 - -
Cec03g0489 367 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524(InterPro)
Cec03g0489 367 Gene3D Phosphorylase Kinase; domain 1 91 202 - -
Cec03g0489 367 MobiDBLite consensus disorder prediction 347 361 - -
Cec03g0489 367 SMART serkin_6 127 344 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0489 367 Pfam Protein tyrosine and serine/threonine kinase 131 273 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0489 367 FunFam Os07g0541700 protein 203 279 - -
Cec03g0489 367 Gene3D Transferase(Phosphotransferase) domain 1 203 273 - -
Cec03g0489 367 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 274 334 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec03g0489 367 ProSiteProfiles Protein kinase domain profile. 127 367 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0489 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0489 367 MobiDBLite consensus disorder prediction 72 100 - -
Cec03g0489 367 Gene3D Transferase(Phosphotransferase) domain 1 274 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0489 Cec-Chr3:5170258 Cec03g0492 Cec-Chr3:5195961 1.00E-67 dispersed
Cec03g0488 Cec-Chr3:5164961 Cec03g0489 Cec-Chr3:5170258 2.80E-116 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71816 PF07714 PK_Tyr_Ser-Thr 9.10E-29 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0489 - - - 0.0