Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0514 ATGAATGGAGAGGAAATTGCAGTTAAAAGGCTGGCTAAGAATTCAGGGCAAGGAGTTGGAGAGTTCAAGAATGAAGTTACATTAATTGCAAAGCTCCAACATAGAAACCTCGTCAGAATTTTAGGCTATTGCGTTAAGAATGAAGAGAAAATGCTTGTATATGAATACTTACCAAACAAAAGCTTGGACTATTTCATCTTTGATGAAAGCAAGAGGGCTTTGCTCAATTGGAAAAAACGTTTTGAAATTATATGTGGCATCGCACGAGGAATCTTATATCTTCATCAAGATTCAAGGTTGAAAATCATTCATCGAGATTTGAAGGCCAGCAATATACTACTGGATGCTGATTTGGATCCCAAAATCGCAGATTTTGGCATGGCAAGGATAGTTGGCCAAGATCAAATTCAAGCAAACACAAATCGCATCGTGGGAACATATGGTTATATGTCACCAGAGTATGCAATGGAAGGCCTATTTTCAGTGAAATCTGATGTTTATAGCTTTGGAGTTTTGGTGCTAGAGGTGATTACAGGCAAAAAGAACACTGGCTGTATATCCAACTACGTAAATTTGGTTGGACAAGTTTGGGAGCTCTGGAACTTTGACAATGCAATGGAATTAGTGGACTCAAGTTTGGAAGAAGGATCAAGTTGTGAATACGAAATCATGAGATGCCTCCAAGTTGGGCTATTGTGTGTTCAAGAGGATCCGACTAACCGTCCGACCATGTCGAATGTGGTTTTCATGTTGGAGAATGAAGTGAGTCTTCCTCTCCAAAGAAACCTGCTTTCATTTTAA 801 39.2 MNGEEIAVKRLAKNSGQGVGEFKNEVTLIAKLQHRNLVRILGYCVKNEEKMLVYEYLPNKSLDYFIFDESKRALLNWKKRFEIICGIARGILYLHQDSRLKIIHRDLKASNILLDADLDPKIADFGMARIVGQDQIQANTNRIVGTYGYMSPEYAMEGLFSVKSDVYSFGVLVLEVITGKKNTGCISNYVNLVGQVWELWNFDNAMELVDSSLEEGSSCEYEIMRCLQVGLLCVQEDPTNRPTMSNVVFMLENEVSLPLQRNLLSF 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5419790 5420988 - CePI673135_03g005140.1 Cec03g0514 198138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0514 266 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 260 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec03g0514 266 FunFam Uncharacterized protein 1 56 - -
Cec03g0514 266 Gene3D Transferase(Phosphotransferase) domain 1 57 259 - -
Cec03g0514 266 Pfam Protein tyrosine and serine/threonine kinase 4 248 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0514 266 SUPERFAMILY Protein kinase-like (PK-like) 2 251 IPR011009 -
Cec03g0514 266 SMART serkin_6 2 250 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0514 266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 102 114 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0514 266 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 57 258 - -
Cec03g0514 266 PIRSF ILK 212 261 - -
Cec03g0514 266 PIRSF ILK 1 191 - -
Cec03g0514 266 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Cec03g0514 266 ProSiteProfiles Protein kinase domain profile. 1 257 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0514 Cec-Chr3:5419790 Cec03g0519 Cec-Chr3:5446567 8.80E-93 dispersed
Cec03g0514 Cec-Chr3:5419790 Cec03g0517 Cec-Chr3:5430538 3.80E-128 proximal
Cec02g0160 Cec-Chr2:1585626 Cec03g0514 Cec-Chr3:5419790 3.90E-94 wgd
Cec03g0514 Cec-Chr3:5419790 Cec04g1949 Cec-Chr4:37796211 7.90E-94 wgd
Cec03g0514 Cec-Chr3:5419790 Cec05g1681 Cec-Chr5:27885745 2.20E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71819 PF07714 PK_Tyr_Ser-Thr 2.10E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0514 - - - 0.0