Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0522 ATGCTTATGTGTTCTCCTCCTTGCTCGCTCACTCCTGTTCGTGCTCATGCTCTTTGCTTCGAAAAAAAAGGTCAAAATGACAAACTACATGCTTCGAATTTGAAAGAAGCCATGGGAGAACTGATTTACAGGTGCAAGCTTTCGGCTTTTCTCTTTCTCTTAACGATCATAGCTCTGTTTCCAACAAAATCATACGGAAATGACAGCATAAAAACAGGGGAATCCATCAATGGAAGTACCCAGATTTTAATTTCATCTGGACAAAACTTCGTGTTGGGAATTTTCACTCCCCAAGGCTCAAAATTTCAGTATTTGGGAATATGGTTCAACAACATCCCACAAACTATCGTGTGGATCGCAAACAGAGACAACCCACTTGTAAATTCCTCTGGAAAATTAGAATTCAGAAGAGGAAACATCGTTCTTCTCAACGAAACAGATGGAATTTTATGGTCTTCCACTTCTCCACGATCATCGAAAGAAACAGTAGCTCAGCTGCTAGATACAGGTAATTGGGTCTTAAGAGAATCTGGGTCTGAAGATTATCTATGGCAGAGTTTCGATTACCCCTCCGATACTCTGTTACCTGGGATGAAACTGGGTTGGAACTCCAAAACCGGTCTAAACCGGAAGTTAAGATCGTGGAAAAGCTCAAACGATCCGTCGTTTGGGGACTTCACTTACAGTGTGGATCTTAGTGGGCTTCCCCAATTGGTAACTCGCAAAGGACCCATCCTAAAGTACCGGGGCGGCCCATGGTACGGTAATAGGTTTAGCGGTAGCGCTCCTCTCAGAGATACCGCAGTTTATTCTCCGAAGTTTGAATATACAGCCGACGAAGTAACTTATTCAATCGTTGCGACGAATAGTCTCATTGTAAAACTTGCACTGGACGCGGCTGGAATATTGCATCAAGTTTATTGGGACGATGGTAGAAAAGATTGGTATCCTCTGTATACTTTGCCAGGGGATCGCTGCGACGACTATGGACTTTGCGGGAATTTTGGTATTTGTACCTTTTCCCTCACTCCACAATGCAATTGCATGGTTGGGTTTGAACCCAAATCGCCTGATGATTGGAAAAGGTTTAGATGGTCAGATGGCTGCGTTAGAAAGGACAATCAAACCTGTAGAAATGGAGAAGGGTTTAAAAGAATCCGCAGTGTGAAATTGCCAGATTCTTCAGGGTATTTGGTGAATGTTAATACAAGCATTCATGACTGCGAGGCGGCGTGCTTGAGCAACTGCTCTTGCTTGGCTTATGGAATAATGGAACTTTCTACAGGTGGCTATGGCTGTGTCACTTGGTTTCAGAAATTGATTGATGCTAGATTTGTTCCTGAAAATGGACAGGATATCTATGTGAGAGTGGCGGCTTCTGAATTAGACTCGAGCAACAGGAAGCTTGTAATTGCTGTTAGTGTGTCTGTGGCTTCACTGATAGCCTTCTTGGTTTTAGTGGTTTGTTTCATCCTGTGGCGTAGAAGGAAAGTTAGAGGCGAAATTCAAAGTCAAGAGAATGAGGTTGAGATGCCACTCTATGATTTTACCACGATTGAGATTGCCACAAATAATTTTTCTTTTTCCAATAAGATAGGGGAAGGTGGTTTTGGTCCTGTATACAAGGGAAAGCTTCCATGTGGGCAAGAAATTGCAGTGAAAAGGTTGGCAGAGGGCTCTGGTCAAGGACAAATCGAGTTCAAAAATGAGGTTTTATTGATTTCCCAACTTCAACATCGAAATCTTGTCAAGCTGCTTGGTTTCTGCATTCATCAAGAACAAACATTACTAGTTTATGAATACATGCCAAACAAAAGTCTAGACTACTTTCTCTTTGATGATGAGGGGCGATCTTTACTCAATTGGCAAAAGAGATTGGACATCATAATTGGAATAGCTCGAGGGCTTCTTTATCTTCACAGAGATTCTAGGCTTAGAATCATACATCGGGATCTTAAAGTGAGTAATATATTACTGGATAATGAAATGAATCCAAAAATTTCAGACTTTGGAATGGCACGAATGTTTCCCGAGGACCAAACTATGACAAAAACCCAAAGAGTTGTTGGAACCTTTGGCTATATGTCTCCTGAATATGCACTCGATGGATGTTTTTCATTGAAATCAGACGTTTTTAGCTTTGGAGTTATTCTTTTGGAAATAGTAAGTGGTAAGAAGAACAGAGGCTTCTTCCATACAGATCATCAACTTAATCTTCTTGGACATGCATGGAAGCTTTGGGATGAAGGAAATGCTTTGGAATTAGTGGATGAAACATTGCAGGATCAATTCCAACCTCACGAAGCACTGCAATGCATTCAAGTTGGGCTTTTGTGTGTTCAACAGAATCCAGATGAAAGACCAACTATGTGGTCAGTACTTTCAATGTTAGAGAGTGAAAATATGCTATTATCTCCTCCTCAACAACCTGGATTTTACACTGAACGAATGGTTTCGAAGACGGATAAATCGTCGACTGAGATCTCGTCTTCCAATGAAGTGACCGTTACACTACTACAAGCTCGTTAG 2529 41.48 MLMCSPPCSLTPVRAHALCFEKKGQNDKLHASNLKEAMGELIYRCKLSAFLFLLTIIALFPTKSYGNDSIKTGESINGSTQILISSGQNFVLGIFTPQGSKFQYLGIWFNNIPQTIVWIANRDNPLVNSSGKLEFRRGNIVLLNETDGILWSSTSPRSSKETVAQLLDTGNWVLRESGSEDYLWQSFDYPSDTLLPGMKLGWNSKTGLNRKLRSWKSSNDPSFGDFTYSVDLSGLPQLVTRKGPILKYRGGPWYGNRFSGSAPLRDTAVYSPKFEYTADEVTYSIVATNSLIVKLALDAAGILHQVYWDDGRKDWYPLYTLPGDRCDDYGLCGNFGICTFSLTPQCNCMVGFEPKSPDDWKRFRWSDGCVRKDNQTCRNGEGFKRIRSVKLPDSSGYLVNVNTSIHDCEAACLSNCSCLAYGIMELSTGGYGCVTWFQKLIDARFVPENGQDIYVRVAASELDSSNRKLVIAVSVSVASLIAFLVLVVCFILWRRRKVRGEIQSQENEVEMPLYDFTTIEIATNNFSFSNKIGEGGFGPVYKGKLPCGQEIAVKRLAEGSGQGQIEFKNEVLLISQLQHRNLVKLLGFCIHQEQTLLVYEYMPNKSLDYFLFDDEGRSLLNWQKRLDIIIGIARGLLYLHRDSRLRIIHRDLKVSNILLDNEMNPKISDFGMARMFPEDQTMTKTQRVVGTFGYMSPEYALDGCFSLKSDVFSFGVILLEIVSGKKNRGFFHTDHQLNLLGHAWKLWDEGNALELVDETLQDQFQPHEALQCIQVGLLCVQQNPDERPTMWSVLSMLESENMLLSPPQQPGFYTERMVSKTDKSSTEISSSNEVTVTLLQAR 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5467923 5474145 - CePI673135_03g005220.1 Cec03g0522 198146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0522 842 CDD PAN_AP_plant 374 458 - -
Cec03g0522 842 ProSiteProfiles EGF-like domain profile. 322 358 IPR000742 -
Cec03g0522 842 Pfam D-mannose binding lectin 115 216 IPR001480 -
Cec03g0522 842 SMART ntp_6 378 457 IPR003609 -
Cec03g0522 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 493 601 - -
Cec03g0522 842 Pfam S-locus glycoprotein domain 248 356 IPR000858 GO:0048544(InterPro)
Cec03g0522 842 SMART serkin_6 526 797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0522 842 ProSiteProfiles Bulb-type lectin domain profile. 67 187 IPR001480 -
Cec03g0522 842 ProSiteProfiles Protein kinase domain profile. 526 804 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0522 842 PIRSF SRK 40 842 IPR024171 GO:0004674(InterPro)
Cec03g0522 842 Pfam PAN-like domain 377 442 IPR003609 -
Cec03g0522 842 CDD STKc_IRAK 532 798 - -
Cec03g0522 842 SUPERFAMILY Protein kinase-like (PK-like) 509 819 IPR011009 -
Cec03g0522 842 CDD B_lectin 76 190 IPR001480 -
Cec03g0522 842 Pfam Protein tyrosine and serine/threonine kinase 527 796 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0522 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0522 842 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 55 811 - -
Cec03g0522 842 Pfam Domain of unknown function (DUF3403) 799 842 IPR021820 GO:0004674(InterPro)
Cec03g0522 842 Gene3D Transferase(Phosphotransferase) domain 1 602 805 - -
Cec03g0522 842 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 805 - -
Cec03g0522 842 Gene3D Phosphorylase Kinase; domain 1 491 601 - -
Cec03g0522 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 116 221 IPR036426 -
Cec03g0522 842 ProSiteProfiles PAN/Apple domain profile. 377 458 IPR003609 -
Cec03g0522 842 Gene3D - 63 187 IPR036426 -
Cec03g0522 842 SMART blect_4 67 190 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0517 Cec-Chr3:5430538 Cec03g0522 Cec-Chr3:5467923 1.70E-188 dispersed
Cec03g0519 Cec-Chr3:5446567 Cec03g0522 Cec-Chr3:5467923 0.00E+00 dispersed
Cec03g0520 Cec-Chr3:5460039 Cec03g0522 Cec-Chr3:5467923 2.90E-25 dispersed
Cec03g0522 Cec-Chr3:5467923 Cec05g1681 Cec-Chr5:27885745 2.60E-215 dispersed
Cec03g0521 Cec-Chr3:5460787 Cec03g0522 Cec-Chr3:5467923 0.00E+00 tandem
Cec03g0522 Cec-Chr3:5467923 Cec03g0523 Cec-Chr3:5476079 1.20E-260 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71823 PF07714 PK_Tyr_Ser-Thr 1.90E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0522 - - - 0.0