Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0524 ATGAAACCCATCACCAACACCATTCCATTAATCCTTCTTCTCCTCTGCTTTGTTTTGAAATTTTCCAGCAGCATAGATACGATCACATCTACACAATTCCTCAAAGATCCCGAAGCTGTATTGTCCAATCGTGGCTTCTTCGAATTGGGTTTCTTCAGCCCTCCCAATTCCACCGATCGGTTCGTCGGAATTTGGGATAAACGAGTGCCTGTACGAACTGTTTTCTGGGTAGCTAACAGAGACAAGCCTCTCAACAACAAATCAGGGGTTTTCGCCGTATCCAACGACGGGAATCTCGTAGTATTAGATGAACACAATAAAATTCTTTGGAACTCCAATGTTTCTAACGCTGTAGTGAACTCCACCGCTCGTCTTCTTGATTCTGGAAACCTTGTTCTGCAGAACTCTGTTTCAGGGACCGTCATTTGGGAGAGTTTCAAAGACCCATCAGACAAATTCTTGCCAATGATGAAATTCATCACGAACTCAATCACAAACGAGAAAGTAGAAATCGTGTCGTGGAAAACCCCATCTGATCCATCTTCAGGAAATTTCTCCTTTGGAATCGACCCTCTGACGATCCCCGAAGTTATAATTTGGAAAAACAGCCGCCCGTATTGGAGGTCCGGTCCATGGGACGGCCATGTTTTCATCGGAATACCCGGTATGAACACTGACTATCTTTCTGGAGGTAATCTCGCAATCGAAAACAAAACTTACTCTCTCTCAATTGCCAATGCAAACGAAGCTCAGTTATTCTACTACTACTTGAACCCCAATGGTAGTTTGGAAGAGAATCGTTGGAATATTGAGGATAAAAAATACGAGATCGCTTGGTCAGCTCCTGAAACAGAGTGTGATGTTTATGGTGCTTGTGGAGCATTTGGGGTTTGCGATTCTCAAAGAACCCCAATTTGCAGTTGTTTGAGGGGTTTTAAGCCAGAGAAGGAAGAAGAATGGAACAGAGGAAATTGGAGAAATGGGTGTGTGAGGAATTCACCATTGGAGTGTGAAAAGAAGAACATCAATGTTGAAATAGGAAAACATGAGGATGGGTTTTTGAAAATGGGAATGGTTAAAGTTCCAGATTCTGCAGCTTGGATTTTAGCTTCGGAAAATGAGTGCAGAGTCCAGTGTTTGTCAAACTGTTCTTGTTCTGCATATGCATATAGAACAGGGATTGGTTGTATGATATGGAGAAGAGATTTAATTGACATTCAACAGTTCAAGAATGATGGAGCAGACATTTATGTTCGTGTGGCATATTCAGAAATAGCTGATGAAAGTGGAATCACCAAAGACATGAAATTAGTCATCATAACTTCTGTGGTAACAGGAAGCTTCATACTTATCTGCTGCATATATTGCTTATGGAAAAGGAAAAGGAAAAGGCAGATCAAGTTTTTGATGAACACTGGTGGTGATATGAAGCATGATAAAGTGAATGAAGTTAAGCTTCAGGAGCTGCCTCTTTTTGATTTTGAGAAGCTGGCAATTGCAACTAACCACTTTCATTTCAATAACAAGATTGGTCAGGGTGGGTTTGGGCCAGTGTACAAGGGAAAATTGGTAGATGGACAAGAAATAGCAGTAAAGAGACTTTCAAAGACCTCTGGACAAGGGCTTGAAGAGTTTACAAATGAAGTGATGGTGATTTCAAAACTACAACATAGAAATCTTGTGCAGCTTTTTGGTTGTTGTGTGGAGGGAGAAGAAAGAATGTTAGTTTACGAGTACATGCCAAATGGAAGCTTAGATTCAATTATTTTTGATTCAACTAAAGCCAAAGTGTTAGATTGGCGAAAAAGATTTAACGTCATTGAAGGAGTTGTTCGAGGGCTTCTTTATCTTCATAGAGATTCAAGGCTAAAAATCATTCATAGAGATCTAAAAGCTAGTAACATTTTACTAGATCGAGATTTAAATCCCAAAATTTCAGATTTTGGTACCGCTAGAATTGTTTACGGCAATGAAGCTCAAGCTAATACCACGAGAGTTATTGGTACATACGGCTATATGTCTCCGGAATACGTGTTGAATGGTCAATTTTCAGAGAAGTCAGATGTGTTTAGCTTTGGAGTTTTGTTGCTTGAAATTATTAGTGGAAGAAAAAATACAAGCTTCTATGATAATGAACACGCCTTGAGCCTTCTAGGATTTGCATGGAAATTATGGATGGAGGACAATTCAGTTGCTTTGATTGATCAAACAACGTTTGAATTGTGTTGTCAAGCAGAGATTTTGAGGTACATTCATGTAGGATTATTGTGTGTTCAAGAATTGGCAAAGGATAGACCAAATATGACGACAATTCTTTCGATGTTTCACAATGAGATCACAGATCTTCCAATACCAAAGCAACCTGGATTTAGTAGTAGGCAAATTGAGATTCATACTCAGGCATTCCAACAAAATCATGTTGGAGCTTGCTCGCCAAACATGATCACGCTTACCTCATTTGATGGTCGATAG 2472 39.77 MKPITNTIPLILLLLCFVLKFSSSIDTITSTQFLKDPEAVLSNRGFFELGFFSPPNSTDRFVGIWDKRVPVRTVFWVANRDKPLNNKSGVFAVSNDGNLVVLDEHNKILWNSNVSNAVVNSTARLLDSGNLVLQNSVSGTVIWESFKDPSDKFLPMMKFITNSITNEKVEIVSWKTPSDPSSGNFSFGIDPLTIPEVIIWKNSRPYWRSGPWDGHVFIGIPGMNTDYLSGGNLAIENKTYSLSIANANEAQLFYYYLNPNGSLEENRWNIEDKKYEIAWSAPETECDVYGACGAFGVCDSQRTPICSCLRGFKPEKEEEWNRGNWRNGCVRNSPLECEKKNINVEIGKHEDGFLKMGMVKVPDSAAWILASENECRVQCLSNCSCSAYAYRTGIGCMIWRRDLIDIQQFKNDGADIYVRVAYSEIADESGITKDMKLVIITSVVTGSFILICCIYCLWKRKRKRQIKFLMNTGGDMKHDKVNEVKLQELPLFDFEKLAIATNHFHFNNKIGQGGFGPVYKGKLVDGQEIAVKRLSKTSGQGLEEFTNEVMVISKLQHRNLVQLFGCCVEGEERMLVYEYMPNGSLDSIIFDSTKAKVLDWRKRFNVIEGVVRGLLYLHRDSRLKIIHRDLKASNILLDRDLNPKISDFGTARIVYGNEAQANTTRVIGTYGYMSPEYVLNGQFSEKSDVFSFGVLLLEIISGRKNTSFYDNEHALSLLGFAWKLWMEDNSVALIDQTTFELCCQAEILRYIHVGLLCVQELAKDRPNMTTILSMFHNEITDLPIPKQPGFSSRQIEIHTQAFQQNHVGACSPNMITLTSFDGR 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5488997 5492066 - CePI673135_03g005240.1 Cec03g0524 198148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0524 823 CDD STKc_IRAK 510 775 - -
Cec03g0524 823 CDD B_lectin 31 149 IPR001480 -
Cec03g0524 823 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544(InterPro)
Cec03g0524 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 790 - -
Cec03g0524 823 Gene3D Phosphorylase Kinase; domain 1 477 579 - -
Cec03g0524 823 Gene3D Transferase(Phosphotransferase) domain 1 580 782 - -
Cec03g0524 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 213 IPR036426 -
Cec03g0524 823 PIRSF SRK 2 823 IPR024171 GO:0004674(InterPro)
Cec03g0524 823 CDD PAN_AP_plant 334 421 - -
Cec03g0524 823 SMART ntp_6 348 420 IPR003609 -
Cec03g0524 823 FunFam receptor-like serine/threonine-protein kinase SD1-8 476 579 - -
Cec03g0524 823 SMART serkin_6 504 775 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0524 823 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Cec03g0524 823 ProSiteProfiles PAN/Apple domain profile. 337 421 IPR003609 -
Cec03g0524 823 SMART blect_4 31 149 IPR001480 -
Cec03g0524 823 ProSiteProfiles Protein kinase domain profile. 504 779 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0524 823 SUPERFAMILY Protein kinase-like (PK-like) 489 801 IPR011009 -
Cec03g0524 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Cec03g0524 823 Pfam PAN-like domain 348 406 IPR003609 -
Cec03g0524 823 Pfam Protein tyrosine and serine/threonine kinase 505 718 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0524 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0524 823 Pfam D-mannose binding lectin 73 175 IPR001480 -
Cec03g0524 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 146 - -
Cec03g0524 823 Gene3D - 21 146 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1180 Cec-Chr2:27763691 Cec03g0524 Cec-Chr3:5488997 2.00E-73 dispersed
Cec03g0524 Cec-Chr3:5488997 Cec03g0526 Cec-Chr3:5523302 9.70E-284 dispersed
Cec03g0523 Cec-Chr3:5476079 Cec03g0524 Cec-Chr3:5488997 3.40E-164 tandem
Cec03g0524 Cec-Chr3:5488997 Cec03g0525 Cec-Chr3:5496720 3.40E-276 tandem
Cec02g0155 Cec-Chr2:1554754 Cec03g0524 Cec-Chr3:5488997 5.60E-130 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71825 PF07714 PK_Tyr_Ser-Thr 2.90E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0524 - - - 0.0