Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0525 ATGAAACCCCGAAAAAGGACTAACTTCTTTCATCTTCATCTTCATCTTTTGCTTTTCTGCTTCGGTTTAAGATTCTGCATCGCTAGAAATATCATCACATCAACGAACTTCATCACAGACCCTTCAACTCTGTTATCTGAAAGCAGTTTCTTCGAGTTGGGATTTTTTAGCCCTGTTAATACAACGAGCCGATATGTCGGAATATGGCTCAATCAAGCTTCTAAGCTCACTGTCGTATGGGTAGCTAACAGACACAACCCTCTAAACCATACTTCTGGGGTTTTCACTATTTCCAAGGATGGAAATCTCGTTGTATTAGACGGAAAGAGTAACATTCTTTGGACTTCAAACATTCTAAACCCTACGATTAACTCGACTGCTCTGCTTTTAGATTCTGGTAATCTTATTTTACAAGACTCTGTTTCTGGGATGATTCTATGGGAGAGTTTCAAACATCCCTCTGATACATTCTTTCCAGCCATGAAAATTTTCACAAACACAAGAACTAAAGAGAAAATAGGGTTGACATCGTGGCAAAGCCCTTCTAATCCATCGAAAGGGCGTTTCTTCTTTGGCATCGATGTTCTGAATAACATTGCTGAAGCTTACATTTGGGAAGGAAGTGATCTGCGTTGGAGATCTGGTCCATGGAATGGCCAATCCTTCATTGGCATACCCCAGATGGATTCTGTTTATTATCTCCTTGGTTTCAGTCTCCTAATTGAAAACCAAACTTACTATCTCTCTGGTCCAAATAGAAATGAGCTGCTCAATTATGAGTTTTATCAGTTAACCTCACAGGGGAATTTTGAGCAATCGCATTGGGATGATACATTGAAGGACTGGAAACCTAGATGGTCAGCTCTAAAAACTCCGTGTGATTTCTATGGAACTTGTGGGGCGTTTGGAATCTGTGATCCAAAATCATTCCCTGTTTGCAGTTGTTTAAAAGGGTTTCAGCCAAAGAATGAGGAGGAATGGAATCAAGGAAATTGGGGAAGTGGGTGTTTGAGAAAGACATCATTGAAGTGTGAGAAAGTGAAAAACGTGAGTGTTGAACATGGCAAGGAAGATGGATTTTTGAAAGTGGGAACAGTTAATTTACCAAATTTTGCAGAGTCGTTGAATTCCTCTGTTTCAGCAGAGGATTGCGGGGTTAAGTGCTCGGATGATTGTTCATGTTCTGCTTATGCTTATGAAAGTGGCATTGGCTGCATGCTATGGAGTGGGGATTTGATCGACGCTCGAAAGCTCGATTTTGGTGGAGCTACTTTTTACCTTAGATTGACATATTCGGAATTAGAGAATGCTACAAAATGGTCGAAAGTGATCGTAATAGCTTCAGTGATAGCTGGAAGTGGATCACTAATCATCATCTTCATCATATTCGTCTCATGGAGAAGGATAATTGGCCGAAAAGCAAAGGAAGAGATCAGAAAAGGCAAGAAGACGATATTGTTAAAGGAGAGGAGGAAATTTTTGAACTTGGTGATGGATCACAGAATGGGAATCAATATGAATCAAGAATTACCAACTTATGACTTTGAGAAGCTGGCAATTGCAACAAACAATTTTCATTTAGATAACAAGCTTGGAAAGGGAGGATTTGGGCCAGTGTATAAGGGAAGATTGCTAGATGGACAAGAAATAGCAATAAAAAGGCTTTCAAGAGCTTCTAAACAAGGGTATGAAGAATTTATAAATGAAGTGATTGTGATTTCTAAACTACAGCATAGAAATCTTGTTCAGCTTCTCGGTTGTTGCATTGAAGGAGAAGAGAAGATGCTAATATATGAGTATATGCCCAACCTAAGTCTGGATGCATTCATTTTTGACTCTACCAAACAAAAACTCTTGGATTGGAGAAAAAGATTTAATATCGTTGATGGAATTGCTCGAGGTCTCCTTTACCTCCATAGAGATTCAAGATTGAGAATTATTCATAGGGATTTGAAGGCAAGTAATATTTTATTAGACAAAGATATGAACCCTAAAATTTCAGACTTTGGTATGGCAAGAATTTTTGGCAATAATGAAGTGGAAGCCAATACTATAAGGGTTGTTGGAACTTATGGATATATGTCGCCTGAGTATGCAATGCAAGGTCAATTTTCAGAGAAATCAGATGTTTTTAGTTTTGGAGTTTTATTACTTGAAATTATAAGTGGAAAAAGGAACACAGGATTCAATCGCCATGAACATGCTTTAAGCTTATTGGAATTTGCATGGAAGTTGTGGATAGAAGACAATCTTATTGCTTTGATCGATCCCACAATGCATGAGTTGTGTTATCAATCAGAAATTTTGCGGTGCATCCAAGTAGGACTCTTATGTGTTGAAGAATCTATAAATGATAGACCAAATGTTGTTGCCATTATTTCAATGCTGAACAGTGAAATTGTAGATCTTCCTATTCCAAAGCAGCCTAGCTTTATTGGCAGACCAACTCAAAGTAATACGAAAACAACACCAGTCATTTGGTCTTCAAATGTTACTTCTCCTACAGTCAACATAACCGCCCGAATTTTAGATTCAGGCAACCTTGTCTTGGAAGATCCTGCTTCCAGAGCGGTTATTTGGGAGAGTTTCAAACACCCTTCCAATATATTCTTGCCTTCCATGGAGCTTGTCACAAACAAAATAACTCAAGAGAAGCTTGAAATTACTTCATGGAAAACCCCTTCCGATCCATCTACAGGTAACTTTTTTTTAGCGTTGGATGTTGTTAATATTCCTGAAGCTGTGATTTGGAATAATGGAGGTAACCCATATTGGAGATCTGGTCCATGGAACGGTCATACTTTTATTGGAATACCCGAAATGATCTCTGTTTATCTCATTGGGTTTAATCTTGCTATCAAAAACCAAGTTTATTCTTTCTCAGTTTCTTACCATAACGACAATCAACTACTTTATAACATACGATTAAGCCCAAAAGGGAATCTAGTGCAGCAGTACTGGAATTCTTCGAAGAAAAATTGGGTTGGGACTTGGTCGGCTTTGAAAACACAATGCGATTATTACGGTGTTTGTGGTGCGTTTGGGCTCTGTAATGGCAAAGCGTCCCCTGTTTGCAGCTGTTTAACAGGGTTTAAACCAAAGGATGAAAAGGAATGGAAACGAGGGAATTGGAGTAATGGGTGTGTGAGAATTACGGCATTGCAGTGTGAGAAATCCAACAACCCCAACACCAGCGGTGAGGAAGATGGGTTTCTAAAAGTGGAATTTGTTAAAGTTCCATTTTTCTCAGAGTGGTCAAATTCCTCTACTTCAGCGGATAATTGCAAACAAAAGTGTTTTGAGAATTGCTTGTGTAGTGCTTATGCGTATGAAAATGGTATTGGTTGTATGCTATGGAGAAAAGACTTAATTGATGTACAGAAATTCGAAAGCCTTGGAGCCAATCTTTACCTTCGACTGGCTCATGCAGACTTGCAAACAATTTATGATGTACAAAGCAAGCGTGGAATCATTACAGTTATGGTGCTACTAGCAACGCCCATGATCGTCATCATTGCCATATACTTCCGGTGGAGATGGAAGGCTAGCCAAATTGAGGATTATAACAAAAACGGGAAAAGATTGAATTTGAGAAGGGATGACATGATTAGGGACAAAAGTAAATTTGAAGAACTACCTCTTTATGATTTTGAGAAGCTGGCCATCGCAACAAACAACTTTGATTTAAGTAAAATACTTGGACAAGGTGGCTTTGGTCCCGTATATAAGGGAAGATTGTTAGATGGACAGGAAATAGCAATAAAGAGGCTTTCAAGAGCTTCTAGTCAAGGGTATGAGGAATTTATAAATGAAGTGATGGTGATTTCCAAACTACAACATAGAAATCTTGTACAGCTTCTCGGTTGTTGCATCGAAGAAGAAGAGAAGATGCTAATATACGAGTACATGCCCAACCTAAGTTTGGATGCATTCATCTTTGACCCCAATAAACAAAAACTCTTGAATTGGAGAAAAAGATTTAACATCATCGATGGGATTGCTCGAGGTCTTCTTTACCGTCATAGAGATTCAAGATTGAGAATTATTCATAGGGATTTGAAGGCAAGTAACATTTTATTGGACAATGACATGAATCCTAAAATTTCAAACTTTGGTATGGCCAGAATATTTGGGAGTAATGAAGTGCAAGCCAATACTAGAAGGATTGTTGGAACTTATGGATATATGTCGCCTGAGTATGCAATGCAAGGTCAATTTTCAGAGAAATCAGATGTTTTTAGTTTTGGAGTTTTATTACTTGAAATTGTAAGTGGGAGAAGAAACACCACCGCCATGAACACGCTTTAA 4308 38.44 MKPRKRTNFFHLHLHLLLFCFGLRFCIARNIITSTNFITDPSTLLSESSFFELGFFSPVNTTSRYVGIWLNQASKLTVVWVANRHNPLNHTSGVFTISKDGNLVVLDGKSNILWTSNILNPTINSTALLLDSGNLILQDSVSGMILWESFKHPSDTFFPAMKIFTNTRTKEKIGLTSWQSPSNPSKGRFFFGIDVLNNIAEAYIWEGSDLRWRSGPWNGQSFIGIPQMDSVYYLLGFSLLIENQTYYLSGPNRNELLNYEFYQLTSQGNFEQSHWDDTLKDWKPRWSALKTPCDFYGTCGAFGICDPKSFPVCSCLKGFQPKNEEEWNQGNWGSGCLRKTSLKCEKVKNVSVEHGKEDGFLKVGTVNLPNFAESLNSSVSAEDCGVKCSDDCSCSAYAYESGIGCMLWSGDLIDARKLDFGGATFYLRLTYSELENATKWSKVIVIASVIAGSGSLIIIFIIFVSWRRIIGRKAKEEIRKGKKTILLKERRKFLNLVMDHRMGINMNQELPTYDFEKLAIATNNFHLDNKLGKGGFGPVYKGRLLDGQEIAIKRLSRASKQGYEEFINEVIVISKLQHRNLVQLLGCCIEGEEKMLIYEYMPNLSLDAFIFDSTKQKLLDWRKRFNIVDGIARGLLYLHRDSRLRIIHRDLKASNILLDKDMNPKISDFGMARIFGNNEVEANTIRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGKRNTGFNRHEHALSLLEFAWKLWIEDNLIALIDPTMHELCYQSEILRCIQVGLLCVEESINDRPNVVAIISMLNSEIVDLPIPKQPSFIGRPTQSNTKTTPVIWSSNVTSPTVNITARILDSGNLVLEDPASRAVIWESFKHPSNIFLPSMELVTNKITQEKLEITSWKTPSDPSTGNFFLALDVVNIPEAVIWNNGGNPYWRSGPWNGHTFIGIPEMISVYLIGFNLAIKNQVYSFSVSYHNDNQLLYNIRLSPKGNLVQQYWNSSKKNWVGTWSALKTQCDYYGVCGAFGLCNGKASPVCSCLTGFKPKDEKEWKRGNWSNGCVRITALQCEKSNNPNTSGEEDGFLKVEFVKVPFFSEWSNSSTSADNCKQKCFENCLCSAYAYENGIGCMLWRKDLIDVQKFESLGANLYLRLAHADLQTIYDVQSKRGIITVMVLLATPMIVIIAIYFRWRWKASQIEDYNKNGKRLNLRRDDMIRDKSKFEELPLYDFEKLAIATNNFDLSKILGQGGFGPVYKGRLLDGQEIAIKRLSRASSQGYEEFINEVMVISKLQHRNLVQLLGCCIEEEEKMLIYEYMPNLSLDAFIFDPNKQKLLNWRKRFNIIDGIARGLLYRHRDSRLRIIHRDLKASNILLDNDMNPKISNFGMARIFGSNEVQANTRRIVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIVSGRRNTTAMNTL 1435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5496720 5514676 + CePI673135_03g005250.1 Cec03g0525 198149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0525 1435 SUPERFAMILY Protein kinase-like (PK-like) 508 829 IPR011009 -
Cec03g0525 1435 ProSiteProfiles PAN/Apple domain profile. 1056 1141 IPR003609 -
Cec03g0525 1435 Gene3D - 26 151 IPR036426 -
Cec03g0525 1435 SUPERFAMILY Protein kinase-like (PK-like) 1207 1433 IPR011009 -
Cec03g0525 1435 Gene3D Transferase(Phosphotransferase) domain 1 1303 1435 - -
Cec03g0525 1435 Gene3D Transferase(Phosphotransferase) domain 1 601 802 - -
Cec03g0525 1435 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Cec03g0525 1435 FunFam receptor-like serine/threonine-protein kinase SD1-8 1200 1302 - -
Cec03g0525 1435 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 809 - -
Cec03g0525 1435 ProSiteProfiles Protein kinase domain profile. 1227 1435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0525 1435 Pfam D-mannose binding lectin 822 892 IPR001480 -
Cec03g0525 1435 Pfam D-mannose binding lectin 77 179 IPR001480 -
Cec03g0525 1435 Pfam S-locus glycoprotein domain 925 1034 IPR000858 GO:0048544(InterPro)
Cec03g0525 1435 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544(InterPro)
Cec03g0525 1435 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 184 IPR036426 -
Cec03g0525 1435 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 150 - -
Cec03g0525 1435 ProSiteProfiles Protein kinase domain profile. 525 868 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0525 1435 SMART serkin_6 525 868 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0525 1435 SMART serkin_6 1227 1433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0525 1435 CDD B_lectin 35 153 IPR001480 -
Cec03g0525 1435 SMART blect_4 35 153 IPR001480 -
Cec03g0525 1435 FunFam Os04g0303100 protein 68 211 - -
Cec03g0525 1435 CDD STKc_IRAK 531 797 - -
Cec03g0525 1435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0525 1435 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 804 - -
Cec03g0525 1435 ProSiteProfiles PAN/Apple domain profile. 344 430 IPR003609 -
Cec03g0525 1435 CDD PAN_AP_plant 1052 1141 - -
Cec03g0525 1435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1348 1360 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0525 1435 CDD PAN_AP_plant 355 429 - -
Cec03g0525 1435 SUPERFAMILY alpha-D-mannose-specific plant lectins 823 932 IPR036426 -
Cec03g0525 1435 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1303 1435 - -
Cec03g0525 1435 Pfam PAN-like domain 1066 1126 IPR003609 -
Cec03g0525 1435 Pfam PAN-like domain 356 414 IPR003609 -
Cec03g0525 1435 SMART ntp_6 1066 1140 IPR003609 -
Cec03g0525 1435 SMART ntp_6 355 429 IPR003609 -
Cec03g0525 1435 Gene3D - 816 907 IPR036426 -
Cec03g0525 1435 Gene3D Phosphorylase Kinase; domain 1 1190 1302 - -
Cec03g0525 1435 Pfam Protein tyrosine and serine/threonine kinase 526 743 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0525 1435 Pfam Protein tyrosine and serine/threonine kinase 1229 1431 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0525 1435 Gene3D Phosphorylase Kinase; domain 1 499 600 - -
Cec03g0525 1435 FunFam receptor-like serine/threonine-protein kinase SD1-8 499 600 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0525 Cec-Chr3:5496720 Cec03g0527 Cec-Chr3:5537018 3.60E-302 dispersed
Cec03g0524 Cec-Chr3:5488997 Cec03g0525 Cec-Chr3:5496720 3.40E-276 tandem
Cec03g0525 Cec-Chr3:5496720 Cec03g0526 Cec-Chr3:5523302 2.00E-292 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71826 PF07714 PK_Tyr_Ser-Thr 2.90E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0525 - - - 0.0