Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0526 ATGAGAAAATTAAGACATTCAATTTCTCTTCTCCTCCTTCTTTCATTGACATGCTTCTCTTCAAGATTTTGCTATGGCGACGATACGATTACATCAACAAATTTCATCAAAGACCCTGCAACTATTGTATCCAATGGCAGTGTCTTCAAATTGGGATTCTTCACACCTTTAAATTCTACCCACAGATATGTTGGAATTTGGTTTGACAAAATTTCTCCACAAACCATAGCATGGGTTGCAAACAGAGACAGCCCTTTGAATGATACTTCTGGGATTTTCACTATTTCCAAGGATGGGAATCTTGTGGTCTTAGATTCAAACAGCACCATCCTTTGGTCTTCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCAACCAACAACAAAATCGCTCAAATTCGAGATTCTGGAAACTTGGTTTTGAAAGATACTACTTCCGGGGTTATTATATGGGAGAGTTTCAAACACCCTTCTGATAAATTCTTGAATTCCATGAAGCTTATGACAAACACAAGAACAAATGAGCACGTGGACTTCATCTCATGGAGCTCGCCTTCCGATCCATCTACAGGTAACTTTTCATTTCTGCTGGATGTTCACAATATCCCTGAAGTTGTGGTTTTGAATGGTGGTAAAACTTATTGGCGATCTGGTCCATGGAACGGTCAGTCCTTTATTGGAATACCTGAAATGAATTCTGTTTATCTCTCTGGGTATAACCTTGCAATCCAAGATCAAACTTACACCCTCTCTCTTGCTTCCAATCTTGATACTCAACAAATTTTTTATTTGTTCATAAGCTCACAAGGGAACCTTGAGCAAAGTGATTGGGATCCTGAGAAGAAGCAATGGAATGTTAGTTGGGTTGCTGAAAAAACAGAGTGTGATTTCTATGGAACTTGTGGAGCGTTTGGGATTTGTAACGCAAAAGCATCCCCTGTTTGCAGTTGTTTAACAGGGTTTAAGCCAAAGCAGGAAAAGGAATGGAATCAAGGAAATTGGAGTAATGGGTGTGTGAGAAAGACGCCATTAAAATGTGAGAATCAGTTGAACAACAACACTGATGCTAAAGAAGATGGGTTTTTAAAATTGGGAATGATCAAAGTTCCATTTCTGGCAGAGTGGTCTACTTCCTCTGTTTCAATAGATGATTGCAAGCGCGAGTGCTTGGGAAATTGTTCCTGTAGTTCTTATGCATTTGAAAATGGCATTTGTATGCAATGGATAAATAACTTAATTGATATACAACAGTTTGAGAGCGCTGGAGCTGATCTTTACCTTCGAATCGCATTCGCAGATTTACCTACAACTACAAATAATGTAAGAGACAAGAAGGGAATTGTTATAGCCATAGCCATAGTGATACCTGCAACGATTGTCATCTTCATCATTGCCATATTCTTTCTCTGGAAATGGAAGACTAACAAACAAGATAAGAAGATAATTATGACGTCTAGCCAAAAAGAAAGGATTTTGAAACAAACAAGGAAAGAGGATAACATGATTGAGGATGAAATCAAACTTGAGGAGCAACCACTTTATGAATTTGAGCAGCTAGCAATTGCAACAGATTACTTTGATTTGAGCAACAAGCTTGGGCAGGGTGGATTTGGTCCAGTGTATAAGGGAAAATTATTAAATGGACAGGAAATAGCAGTAAAGAGGCTTTCAAGAGCTTCTAAACAAGGGTATGAAGAATTTATAAATGAAGTGAGAGTGATTTCAAAGCTACAACACAGGAATCTTGTAAGACTTTTGGGTTGTTGCATTGAAGGAGAAGAGAAGATGTTAATTTATGAGTATATGCCCAACCTAAGTTTGGATGCATTCATCTTTGGCTCTCCCAAACAAAAAATTTTCGACTGGGGAAAAAGATTCAATATTATCGATGGAATTGCTCGAGGTCTTCTTTACCTTCATAGAGATTCAAGATTGAAAATTATTCATAGAGATCTTAAGGTAAGTAATATTTTGTTAGACAAAGATTTGAACCCTAAAATTTCGGATTTTGGCATGGCAAGAATCTTTGGTGGCGATGAAGTTGAAGCAAACACTTTAAGAGTTGTTGGAACTTATGGATATATGTCTCCTGAATATGCGATGCAAGGTCAATTTTCAGAGAAATCAGATGTGTTTAGTTTTGGAGTTTTGTTACTTGAAATTATTAATGGGAGAAGAAATACAGGATTCTACCTCCATGAAAATTGCATAAGCTTACTGGGATTTGCATGGAAATTGTGGATGGAAGACAATCTTATTCCTTTGATTGAACCAACAATATATGAACTGTGCTACAAATCAAATATTTTGAGATGCATTCATGTGGGACTCTTATGTGTTCAAGAATTTATTAATGAGAGACCAAATATTTCCACCATCATTTCAATGCTTAATAGTGAAATTGTCGATCTTCCTTCTCCAAAGCAACCTGGCTTTGTGGGCAGACCACATGAAAGTAACACAGAATCTTCTCAACAAAATTTAGATCAATATTCTGTAAATAATGTTACACTTACAACAGTTATAGCACGCTAA 2541 36.88 MRKLRHSISLLLLLSLTCFSSRFCYGDDTITSTNFIKDPATIVSNGSVFKLGFFTPLNSTHRYVGIWFDKISPQTIAWVANRDSPLNDTSGIFTISKDGNLVVLDSNSTILWSSNVSSSSSSSSSSATNNKIAQIRDSGNLVLKDTTSGVIIWESFKHPSDKFLNSMKLMTNTRTNEHVDFISWSSPSDPSTGNFSFLLDVHNIPEVVVLNGGKTYWRSGPWNGQSFIGIPEMNSVYLSGYNLAIQDQTYTLSLASNLDTQQIFYLFISSQGNLEQSDWDPEKKQWNVSWVAEKTECDFYGTCGAFGICNAKASPVCSCLTGFKPKQEKEWNQGNWSNGCVRKTPLKCENQLNNNTDAKEDGFLKLGMIKVPFLAEWSTSSVSIDDCKRECLGNCSCSSYAFENGICMQWINNLIDIQQFESAGADLYLRIAFADLPTTTNNVRDKKGIVIAIAIVIPATIVIFIIAIFFLWKWKTNKQDKKIIMTSSQKERILKQTRKEDNMIEDEIKLEEQPLYEFEQLAIATDYFDLSNKLGQGGFGPVYKGKLLNGQEIAVKRLSRASKQGYEEFINEVRVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNLSLDAFIFGSPKQKIFDWGKRFNIIDGIARGLLYLHRDSRLKIIHRDLKVSNILLDKDLNPKISDFGMARIFGGDEVEANTLRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIINGRRNTGFYLHENCISLLGFAWKLWMEDNLIPLIEPTIYELCYKSNILRCIHVGLLCVQEFINERPNISTIISMLNSEIVDLPSPKQPGFVGRPHESNTESSQQNLDQYSVNNVTLTTVIAR 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5523302 5526500 + CePI673135_03g005260.1 Cec03g0526 198150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0526 846 CDD STKc_IRAK 534 800 - -
Cec03g0526 846 PIRSF SRK 1 846 IPR024171 GO:0004674(InterPro)
Cec03g0526 846 Pfam Domain of unknown function (DUF3403) 801 846 IPR021820 GO:0004674(InterPro)
Cec03g0526 846 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Cec03g0526 846 CDD B_lectin 33 159 IPR001480 -
Cec03g0526 846 SMART ntp_6 358 431 IPR003609 -
Cec03g0526 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 156 - -
Cec03g0526 846 Gene3D Transferase(Phosphotransferase) domain 1 604 806 - -
Cec03g0526 846 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544(InterPro)
Cec03g0526 846 SMART serkin_6 528 804 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0526 846 ProSiteProfiles Protein kinase domain profile. 528 804 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0526 846 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 813 - -
Cec03g0526 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 604 807 - -
Cec03g0526 846 Pfam Protein tyrosine and serine/threonine kinase 530 728 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0526 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 224 IPR036426 -
Cec03g0526 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 490 603 - -
Cec03g0526 846 Gene3D - 24 157 IPR036426 -
Cec03g0526 846 Pfam PAN-like domain 359 417 IPR003609 -
Cec03g0526 846 CDD PAN_AP_plant 344 432 - -
Cec03g0526 846 Pfam D-mannose binding lectin 75 184 IPR001480 -
Cec03g0526 846 SUPERFAMILY Protein kinase-like (PK-like) 510 799 IPR011009 -
Cec03g0526 846 Gene3D Phosphorylase Kinase; domain 1 486 603 - -
Cec03g0526 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0526 846 SMART blect_4 33 159 IPR001480 -
Cec03g0526 846 ProSiteProfiles Bulb-type lectin domain profile. 27 156 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1650 Cec-Chr1:31162003 Cec03g0526 Cec-Chr3:5523302 1.20E-95 dispersed
Cec02g0160 Cec-Chr2:1585626 Cec03g0526 Cec-Chr3:5523302 3.20E-168 dispersed
Cec03g0524 Cec-Chr3:5488997 Cec03g0526 Cec-Chr3:5523302 9.70E-284 dispersed
Cec03g0526 Cec-Chr3:5523302 Cec04g1949 Cec-Chr4:37796211 1.30E-193 dispersed
Cec03g0525 Cec-Chr3:5496720 Cec03g0526 Cec-Chr3:5523302 2.00E-292 tandem
Cec03g0526 Cec-Chr3:5523302 Cec03g0527 Cec-Chr3:5537018 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71827 PF07714 PK_Tyr_Ser-Thr 1.10E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0526 - - - 0.0