Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0527 ATGGTTATATCAAAATATGGCTCTGTTTTATGCATAGCTTTTTTCCACTCCGTTTGGTTCAGTAATTTGTATTCAGCCTCACCCATGAAACCTAAAAACAACTACGCCTCTTCATATCCTACTCCACTTCTTCTTCTTCTTTCATTTACTTTCTTCTCTCCAACATTTTGCTTTGGCAAAGATTCAATCACATCAGAAAATTTCATCAAAGACCCTGCTTCTGTTACTTCCAATGCCAGTTCCTTCCAGTTGGGCTTCTTCACACCGCCTAATTCCACCGCCCGATATGTCGGAATTTGGTACAACCAAATTTCCTTACAAACCATAGTCTGGGTGGCCAACAAAGACAATCCCCTCAAAGATTCTTCTGGGATTTTCACTATTTCTAAACAGGGACATCTCGTCGTCTTAGATGGAAACCACACCGTCCTCTGGTCTTCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCTACAACCAACACAATCGCTCGAATTTTAGATTCAGGTAACCTTGTTTTGGAAGATACTGCTTCTGGGAACATCATATGGGAGAGTTTTCAACACCCTTCTAATAAATTCTTGACTTCCATGAAACTGATCACGAACACAAGAACAAAAGAGAAGATGCAGCTTACCTCATGGAGCACCCCAGTTAATCCATCCACTGGAAACTTTTCCTTAGCACTAGAAGTTCTGACTATTCCTGAAGCTGTGATTTGGTCTAATGGTGGAAACCTTTATTGGCGATCTGGTCCATGGAACGGTCAGTCTTTTATCGGAATACCCGAAATGAACGCTGTTTATCTTTCTGGGTTTAACCTTGTAATTCAAGATCAAGAATACACTTTATCTGTTCCTTATAATTACACTATTCAAGAATTCGCTTATTTGTTTTTAACTTCGAGAGGGAATTTGGTGCAAACGTATTGGAATCCTCAAGTGAGGAATTGGGATGTTATTTGGTTTGCTATAAAAACAGAGTGTGATTTCTATGGAACTTGTGGGGCGTTTGGGATTTGTAATCCAAAGGCATCTCCTATTTGCAGCTGTTTAAAAGGGTTTAAGCCAAAGAATGAAGAGGAATGGAATCAAGGAAATTGGAGTGGTGGGTGTGTGAGAAGGACGCCATTGCAATGCATTAATGTCAGTTCTGAAGAAGATGGATTTCTAACAGTTGAAATGGTTAAATTGCCATATTTTGTAGAGTGGTCCATTTTCGCTGCTACAGAAGATAATTGCAAACAAGAGTGCTTGAGCAATTGTTCGTGTAATGCTTATGCATTTGAAAATGGTATTCGGTGTATGCTATGGAGAAGGGATGACTTAATTGATATACAAAAATTTGAGACTGGTGGGGCTTCTCTTTACCTTCGGTTGCCATATGCAGAATTAGATCATAATAATAATGTAAAAGATAAGAAAGGGATTATTATAGCAATTGTGCTACCAGTGACCTTTATCATCATGATCATCATCACCATATCATTTTGGTTGAAAAGGAAGACTCACAAAAAGAAAAAAACATCTGAAGAAATAGAAAGGACTTTGAAATTGACAAGGGAGGATGATATGATTGAGGATGGTATCAAACTTGAAGACCTACCTCTTTATGACTTTGAGCAGCTTGTAAGTGCAACAAACAATTTTGATATAAATAACAAACTTGGGCAAGGTGGGTTTGGTCCTGTATATAAGGGAAAATTGTTAAATGGACAAGAAATAGCAGTAAAAAGGCTTTCAAGAGCCTCCAATCAAGGGTATGAAGAATTTATAAATGAAGTGAGAGTGATTTCTAAACTACAACATAGAAATCTTGTAAGGCTCTTTGGTTGTTGCATGGAAGGAGAAGAGAAAATGTTGATATATGAGTACATGCCCCGCCTAAGTTTGGATGCTTTAATCTTTAGCTCTCCCCAGCCAGAATTTTTGGACTGGAGGCAGAGATTTAACATTATTGATGGAATTGCTCGAGGTCTTCTTTATCTTCATAGAGACTCAAGATTGAAAATCATTCATAGAGATCTCAAAGCAAGTAATATTTTGTTAGACCAAGATTTGAACCCTAAAATTTCCGACTTTGGCATGGCAAGGATTTTTTGTGGCAATGAAGTCCAAGCGAACACTTTAAGAGTTGTCGGAACTTATGGGTATATGTCTCCTGAATATGCAATGCAAGGTCGATTTTCAGAGAAATCAGATGTATTTAGTTTTGGAGTTCTATTGCTTGAAATTATCAGTGGGAGACGAAATACAGAGTTTTACTACCATGAACAAGCTATAAGCTTATTGGGATTTGTATGGAAGTTGTGGATGGAAGACAATCTTATTCCTACGATCGAACCAAGAATATATGAATTGTGCTATCAACTAGAGATTTTTAGATGCATTCAAGTGGGGCTCTTATGCGTTCAAGAATTTGCAAATGATAGGCCAAATGTTTCCACTATTATTTCAATGCTCAATAGTGAAATTGTAGATCTTCCTTCTCCAAAGGAACCTGGGTTTGTTGGTAGACCACATGAAATGGTGAAGAAGATGGGTTTGTATAAAGTGGAAATGGTTAAAGTAGCGTATTTTGTAGAGTGGTCTACTTTCTCTTTTACTTCAAGTGATTTCAAACAAGAGTGTTTGAACAATTGTTCTTGTAATGCTTATGCGTATGAAGATGGAATTCGGTGTATGCTTTGGAGAAGGGATGAGTTAATTGATATTCAAAAGTTTGAGAGTGGTGGAGCTTCTCTTTACCTACATCAGAAAAAGTTAACTTTGATGTCAAACGAAAAGGAGAAAACGATATTGAAACTGACAAGGGAGGATGATGTGATAATTGAGGATGGCATCACACTTGAAGAGCTACCTCTTTATGATTTTGAGAAGCTTGTAATTGCAACCAACAATTTTGATATAGATAACAAACTTGGGCAAGGTGGCTTTGGTCCAGTGTACAAGGGAAAATTGTTAAATGGACAAGAAATAACAACAAAGAGTCTTTCAGAGCCTCCAATCAAGGTGAAAAACAGGCAGATCTAA 3030 37.46 MVISKYGSVLCIAFFHSVWFSNLYSASPMKPKNNYASSYPTPLLLLLSFTFFSPTFCFGKDSITSENFIKDPASVTSNASSFQLGFFTPPNSTARYVGIWYNQISLQTIVWVANKDNPLKDSSGIFTISKQGHLVVLDGNHTVLWSSNVSSSSSSSSTTNTIARILDSGNLVLEDTASGNIIWESFQHPSNKFLTSMKLITNTRTKEKMQLTSWSTPVNPSTGNFSLALEVLTIPEAVIWSNGGNLYWRSGPWNGQSFIGIPEMNAVYLSGFNLVIQDQEYTLSVPYNYTIQEFAYLFLTSRGNLVQTYWNPQVRNWDVIWFAIKTECDFYGTCGAFGICNPKASPICSCLKGFKPKNEEEWNQGNWSGGCVRRTPLQCINVSSEEDGFLTVEMVKLPYFVEWSIFAATEDNCKQECLSNCSCNAYAFENGIRCMLWRRDDLIDIQKFETGGASLYLRLPYAELDHNNNVKDKKGIIIAIVLPVTFIIMIIITISFWLKRKTHKKKKTSEEIERTLKLTREDDMIEDGIKLEDLPLYDFEQLVSATNNFDINNKLGQGGFGPVYKGKLLNGQEIAVKRLSRASNQGYEEFINEVRVISKLQHRNLVRLFGCCMEGEEKMLIYEYMPRLSLDALIFSSPQPEFLDWRQRFNIIDGIARGLLYLHRDSRLKIIHRDLKASNILLDQDLNPKISDFGMARIFCGNEVQANTLRVVGTYGYMSPEYAMQGRFSEKSDVFSFGVLLLEIISGRRNTEFYYHEQAISLLGFVWKLWMEDNLIPTIEPRIYELCYQLEIFRCIQVGLLCVQEFANDRPNVSTIISMLNSEIVDLPSPKEPGFVGRPHEMVKKMGLYKVEMVKVAYFVEWSTFSFTSSDFKQECLNNCSCNAYAYEDGIRCMLWRRDELIDIQKFESGGASLYLHQKKLTLMSNEKEKTILKLTREDDVIIEDGITLEELPLYDFEKLVIATNNFDIDNKLGQGGFGPVYKGKLLNGQEITTKSLSEPPIKVKNRQI 1009
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5537018 5546070 + CePI673135_03g005270.1 Cec03g0527 198151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0527 1009 SUPERFAMILY Protein kinase-like (PK-like) 533 820 IPR011009 -
Cec03g0527 1009 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 52 834 - -
Cec03g0527 1009 SUPERFAMILY Protein kinase-like (PK-like) 951 1000 IPR011009 -
Cec03g0527 1009 ProSiteProfiles PAN/Apple domain profile. 379 460 IPR003609 -
Cec03g0527 1009 CDD PAN_AP_plant 375 460 - -
Cec03g0527 1009 SMART serkin_6 549 902 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0527 1009 Gene3D Transferase(Phosphotransferase) domain 1 625 827 - -
Cec03g0527 1009 ProSiteProfiles Protein kinase domain profile. 549 825 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0527 1009 ProSiteProfiles Bulb-type lectin domain profile. 60 186 IPR001480 -
Cec03g0527 1009 CDD B_lectin 67 189 IPR001480 -
Cec03g0527 1009 Pfam PAN-like domain 379 444 IPR003609 -
Cec03g0527 1009 Pfam PAN-like domain 847 903 IPR003609 -
Cec03g0527 1009 SUPERFAMILY alpha-D-mannose-specific plant lectins 104 254 IPR036426 -
Cec03g0527 1009 CDD PAN_AP_plant 846 916 - -
Cec03g0527 1009 Gene3D Phosphorylase Kinase; domain 1 508 624 - -
Cec03g0527 1009 Gene3D Phosphorylase Kinase; domain 1 929 1008 - -
Cec03g0527 1009 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 56 186 - -
Cec03g0527 1009 Pfam Protein tyrosine and serine/threonine kinase 551 757 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0527 1009 Gene3D - 58 187 IPR036426 -
Cec03g0527 1009 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 625 828 - -
Cec03g0527 1009 Pfam D-mannose binding lectin 108 214 IPR001480 -
Cec03g0527 1009 CDD STKc_IRAK 555 821 - -
Cec03g0527 1009 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 513 624 - -
Cec03g0527 1009 SMART ntp_6 384 459 IPR003609 -
Cec03g0527 1009 SMART ntp_6 843 918 IPR003609 -
Cec03g0527 1009 SMART blect_4 66 189 IPR001480 -
Cec03g0527 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0527 1009 Pfam S-locus glycoprotein domain 248 358 IPR000858 GO:0048544(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0525 Cec-Chr3:5496720 Cec03g0527 Cec-Chr3:5537018 3.60E-302 dispersed
Cec03g0527 Cec-Chr3:5537018 Cec04g1949 Cec-Chr4:37796211 3.70E-192 dispersed
Cec03g0526 Cec-Chr3:5523302 Cec03g0527 Cec-Chr3:5537018 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71828 PF07714 PK_Tyr_Ser-Thr 5.60E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0527 - - - 0.0