Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0575 ATGTATGACTGTATTGATTTTCGTTCTGCTGGAGAAGTTTACAGAATTACGGCCCCAAGTATGAGTTGCATCTGCTTCGGTTCCTCTACTGTGGAGAAGAAACGAATCTCAACACGTGCTGATAAGGAATTGGACATTGACTTGCTTGAGAATGTAAAACAAATCTCCTTCAATGAATTAAGATCTGCTTCGGACAATTTCCATTCAAACAATAGAATTGGACGGGGAGGTTTTGGAACTGTTTACAAGGGCACATTAAGGAATGGAGTACAAGTTGCAATAAAGAAGCTCTCCATAGAGTCTAAGCAAGGTGCTCACGAATTTTTGACAGAGATCAAAACCATTTCAAATGTTAGGCATCGAAACCTTGTCGAGTTGATTGGATGCTGTTCTCAAAAAGCTAACCGGATCTTGGTATATGAATATCTGGAGAATAATAGTCTCGACCATGCTTTGTTAGATCCTAAGAAAACAAGCGTGAACCTAGATTGGGGGAAGAGGTCCTCTATTTGCATTGGTACTGCGAGGGGTCTTCAATTTCTTCACGAGGAAGCTGTTCCACGTATTGTGCATAGAGACATCAAGGCTAGTAATATACTCCTTGATGGGGACTTCAATCCGAAAATTGGTGACTTTGGATTAGCCAAACTTTTCCCAGATGATATCACTCACATTAGCACAAGAATTGCAGGAACAACCGGTTATTTGGCTCCAGAGTATGCATTGGGAGGTCAGCTAACTCCAAAGGCTGATGTATATAGCTTTGGAGTCCTCATCCTTGAAATAGTTAGTGGTAGACGTAGCAGTACAGTTTTTGGGAGAGCAATATCAATACTCTTGCTGGAAAGGGTGTGGGAGCTATATGAAGAAGGAAAACTCTTAGAAATAGTTGATCCTAGACTAGAAGATTATCCTCAGGAAGAAGTGCTTAGGTACATGAAAGTGGCTCTTTTTTGCACACAAGCGGCTGCAAATCGGCGGCCAGCAATGAGCCAAGTCGTTGACATGCTTACAAAGAATATCAAGCTTAACGAGAAGCTACTTACCGCCCCGGGGTTCTATGGAGGCATGGGGCTTAGTGACATTCCTTCAGTGAGCAAGAAGACCTCGAACACTTCCACTAGCAACGAGATGAGCTCCGCCGTCGTCTCCATAACTCAAATCACCCCCAGATGA 1176 42.94 MYDCIDFRSAGEVYRITAPSMSCICFGSSTVEKKRISTRADKELDIDLLENVKQISFNELRSASDNFHSNNRIGRGGFGTVYKGTLRNGVQVAIKKLSIESKQGAHEFLTEIKTISNVRHRNLVELIGCCSQKANRILVYEYLENNSLDHALLDPKKTSVNLDWGKRSSICIGTARGLQFLHEEAVPRIVHRDIKASNILLDGDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTPKADVYSFGVLILEIVSGRRSSTVFGRAISILLLERVWELYEEGKLLEIVDPRLEDYPQEEVLRYMKVALFCTQAAANRRPAMSQVVDMLTKNIKLNEKLLTAPGFYGGMGLSDIPSVSKKTSNTSTSNEMSSAVVSITQITPR 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6093233 6103918 - CePI673135_03g005750.1 Cec03g0575 198199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0575 391 ProSiteProfiles Protein kinase domain profile. 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0575 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0575 391 SMART serkin_6 67 353 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0575 391 FunFam cold-responsive protein kinase 1 38 142 - -
Cec03g0575 391 FunFam Putative LRR receptor-like serine/threonine-protein kinase 143 349 - -
Cec03g0575 391 Pfam Protein tyrosine and serine/threonine kinase 69 337 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0575 391 Gene3D Transferase(Phosphotransferase) domain 1 143 349 - -
Cec03g0575 391 Gene3D Phosphorylase Kinase; domain 1 32 142 - -
Cec03g0575 391 SUPERFAMILY Protein kinase-like (PK-like) 49 337 IPR011009 -
Cec03g0575 391 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524(InterPro)
Cec03g0575 391 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 38 376 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cec03g0575 391 CDD STKc_IRAK 73 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0575 Cec-Chr3:6093233 Cec10g2200 Cec-Chr10:36442751 5.90E-114 dispersed
Cec03g0841 Cec-Chr3:10173671 Cec03g0575 Cec-Chr3:6093233 7.70E-16 transposed
Cec02g1927 Cec-Chr2:37128872 Cec03g0575 Cec-Chr3:6093233 2.00E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71829 PF00069 Pkinase 1.00E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0575 - - - 0.0