Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0592 ATGGCCGTACTCAAACTCCCATTTCTCCTCCTCTCTTTCCCCCTTCTTCTTTTCTCCTCCATTTCCGCCGTCGATTTTCTCTTCAATGGCTTCAATTCCACCGCCGTCTCCCTCTACGGCAACGCCACCATCGAATCCCGTTTCATCGCTCTCACCAACCAAACCAATTTCTCCATCGGCCGCGCTCTGTACCCTTCCAAAATCCCCACTAAGCCTCCTAATTCCTCTTCCCCCTACCCTTTCTCCGCTTCTTTCATCTTCGCCATGGCCCCTTACAGAGATACCCTTCCTGGGCATGGCTTGGTTTTCATTTTCGTTCCCACCACCGGAATCGAGGGAACTGCCTCTGCTCAGAATTTGGGGTTTCTCAACTTCACACTTAATGGGAACCCCAATAACCATGTCTTCGGAATTGAGTTTGATGTGTTTGCTAATGAGGAATTCAGCGACCCCAACGATAATCATGTCGGAATCAACTTGAATTCCTTGACGTCTTTCGTCACCGGAGAAGCTGGGTTTTGGTCTGACGGTGGTGGCGCGGATTCTTTCAACAGGTTCAGGCTTAATAGCGGCGAAAATTATCAAGTCTGGGTTGACTATTCCGACTTTCAGATGAATGTTACGATGGCTCCGGTGGGGATGAAGAAGCCACGGCGGCCGTTGATTAATACCTCTCTGAATCTCTCTGGAATTTTCATGGATGAAATGTATGTGGGGTTCACGAGTTCAACAGGGCAGTTGGTTCAAGGCCATAACATTTTAGCTTGGAGTTTCAGTAACTCTAATTTTTCATTGAGTGAGAGTTTGATTACGACTGGTTTGCCCTCCTTCGTCCTCCCAAAAGACCCAATTACCAAATCGAAGTGGTTCATCGCCGGAGTGACGGCCGGCGGATTCCTCGTCGTTTGTTTCATCGCGATGATTTTGGGGATTTTGATCGCCGACCACCGGAGGAAAGCGAGATTGAGAGCCGAAATGGAAGACTGGGAATTGGAGTATTGGCCACACCGAATGACATATCAAGAAATCGAATCGGCAACGAAAGGTTTTGCAGAAGAAAATGTGATCGGAATCGGAGGGAATGGAAAAGTTCATAAAGGGATTTTGGCCGGGGGAGGATCTGAAGTTGCAGTGAAACGAATTTCTCACGATAACGACGGGATGCGTGAATTCTTAGCTGAAATCTCAAGCATAGGAAGATTAAAGCACAGAAATCTAGTGAGTTTGAGGGGTTGGTGTAAAAAAGAGAAGGGAAATTTCTTGCTTGTTTATGATTACATGGAAAATGGAAGCTTAGATAAATGGGTTTTTGATTGCGAGGAAAGAAACATGTTGAGTTGCGAGGATCGAATCCGAGTATTGAAAAACGTAGCCTCAGGGGTTTTGTATTTACACGAAGGATGGGAATCAAAGGTTCTTCATAGGGATATAAAAGCTAGCAACGTGTTGTTAGATAAGGATATGAATGGAAGGCTAGGAGATTTCGGGCTAGCTCGAGTCCATGGTCACGGTCAAGTGGCGAGCACGACTCGAGTTGTTGGCACCATGGGTTATATTGCCCCCGAGTTGATTCGAACTGGACGAGCCTCAGCTCAATCCGACGTATTTGGCTTTGGGGTTTTGATTTTGGAAGTGATGTGTGGGAGGAGGCCAATAGAGGAAGGGAAGCCACCGTTGGTGGATTGGGTTCGGCGGTTGGTGGTTGAAGGGGAGCTGACAGCAGCGCTCGATGAGAGGCTGAGGAAGAAGGGTGGGTGGAACGAGGAGGAAGTTGAGAGAGTAATGCATTTGGGATTGTTGTGTGCGCATCCTAACCCGAACACTCGGCCAACGATGAGGCAAATTGTGAAGGTTTTGGAAGGGAAGATTGAGTTGGATGAGAGTGAGAGTGAGAGTATGAATGCTTATTTGCTTCAAAGATTGAAGTCACAAGGAATTTGGTCTGATTCTGCTGTTGGTTTTGGGGATAGATTGCATCCTACATTTGAGGATTTTCTTCAGTCTTCTTCAACTTCCATATCTTGGTCTAGTTCCAATGTCCATGGCAGGTGA 2052 46.98 MAVLKLPFLLLSFPLLLFSSISAVDFLFNGFNSTAVSLYGNATIESRFIALTNQTNFSIGRALYPSKIPTKPPNSSSPYPFSASFIFAMAPYRDTLPGHGLVFIFVPTTGIEGTASAQNLGFLNFTLNGNPNNHVFGIEFDVFANEEFSDPNDNHVGINLNSLTSFVTGEAGFWSDGGGADSFNRFRLNSGENYQVWVDYSDFQMNVTMAPVGMKKPRRPLINTSLNLSGIFMDEMYVGFTSSTGQLVQGHNILAWSFSNSNFSLSESLITTGLPSFVLPKDPITKSKWFIAGVTAGGFLVVCFIAMILGILIADHRRKARLRAEMEDWELEYWPHRMTYQEIESATKGFAEENVIGIGGNGKVHKGILAGGGSEVAVKRISHDNDGMREFLAEISSIGRLKHRNLVSLRGWCKKEKGNFLLVYDYMENGSLDKWVFDCEERNMLSCEDRIRVLKNVASGVLYLHEGWESKVLHRDIKASNVLLDKDMNGRLGDFGLARVHGHGQVASTTRVVGTMGYIAPELIRTGRASAQSDVFGFGVLILEVMCGRRPIEEGKPPLVDWVRRLVVEGELTAALDERLRKKGGWNEEEVERVMHLGLLCAHPNPNTRPTMRQIVKVLEGKIELDESESESMNAYLLQRLKSQGIWSDSAVGFGDRLHPTFEDFLQSSSTSISWSSSNVHGR 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6277216 6279267 + CePI673135_03g005920.1 Cec03g0592 198216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0592 683 PANTHER - 31 625 IPR050528 GO:0005886(PANTHER)
Cec03g0592 683 CDD STKc_IRAK 356 621 - -
Cec03g0592 683 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524(InterPro)
Cec03g0592 683 CDD lectin_legume_LecRK_Arcelin_ConA 24 256 IPR001220 GO:0030246(InterPro)
Cec03g0592 683 Gene3D Transferase(Phosphotransferase) domain 1 427 642 - -
Cec03g0592 683 SMART serkin_6 350 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0592 683 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Cec03g0592 683 FunFam L-type lectin-domain containing receptor kinase S.4 22 266 - -
Cec03g0592 683 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 312 426 - -
Cec03g0592 683 SUPERFAMILY Protein kinase-like (PK-like) 328 620 IPR011009 -
Cec03g0592 683 Gene3D - 22 268 - -
Cec03g0592 683 FunFam L-type lectin-domain containing receptor kinase S.4 427 632 - -
Cec03g0592 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 266 IPR013320 -
Cec03g0592 683 Pfam Legume lectin domain 24 263 IPR001220 GO:0030246(InterPro)
Cec03g0592 683 Pfam Protein kinase domain 351 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0592 683 ProSiteProfiles Protein kinase domain profile. 350 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0592 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0592 Cec-Chr3:6277216 Cec04g0939 Cec-Chr4:29070372 1.80E-137 dispersed
Cec06g1930 Cec-Chr6:32685352 Cec03g0592 Cec-Chr3:6277216 6.20E-140 transposed
Cec03g0592 Cec-Chr3:6277216 Cec07g0324 Cec-Chr7:3179289 4.10E-211 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71830 PF00069 Pkinase 1.10E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0592 - - - 0.0