Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0596 ATGGATGAAGATGCTAATTCTTGGTTAAGAAGAACCAAGTTTTCTCACACAATATGTTATCGTTTAGAGTCCTTACGATTGGCTTCCTTTCCTGTGGTCACTCAGCCACCACTCAAATCAGTCGCACAATCAAGATCAACCCTTCCTAATAACCTAACCAAGCAGAGGTCTTTATCTCCTCCTCCACAAACTACACTCTCCGGCGCATTTAAGGATGCACGTACGGATCAAAAACGATTTTCAACTCCACAGCCTCAGAGGAAAGAACCTGTAAAAGAAAAGGGTAAAAGGCTATTTAGTAAAAAAGCTAAGGTGCAAAATTCCCTGAAGGAAGAGAAGTTAAAAGGACCTATGAGGCATCTTATATCTTTTAAAGGCAATGATAAGTTCAAATTCAAGGAGTCTTCTTGGACTAAATTTGGCGGAGGGAAGGTCACTGCTGTTGAAGCTGAAGACGAATCGTCTATTGACCTGTCTAAGTTGATGTTTGGACATAGATTTGCTTTTGGAGCTCATAGTCGGCTATACCATGGAATTTATGAAGATAAAGTTGTTGCTGTTAAGATGATCAATCTACCAGTCAATGATGAAAATGGCGATCTCGCAGCTCGCTTAATAAAGCAATTTGGTAGGGAAGTAACCCTTTTGTCTCGTCTCCATCATCGCAATGTTATAAAGTTAGTAGCAGCAGTGAAAAAGCCACCCGTTTATTGCATCATCACTGAGTATCTACCTCAGGGTTCCTTGAGGGCATATCTTCACAAACTTGAAAAAAAATCTCTCCCATTGCAAAAACAAATTGCCATTGCCTTAGACATTGCTCGTGGGATGGAATACATTCACTCGCAAGGCGTCATTCATCGGGATCTCAAACCTGAGAACATTCTTATTGATCAAGACTTTTGTCTAAAGATTGCCGATTTCGGCATTGCTTGTGAGGAGGCACATTGTGATACACTGGCCGAGGACCCCGGAACTTTTCGTTGGATGGCCCCCGAGATGATCAAACGTAAACCTTATGGGAGAAAGGTCGATATCTACAGCTTCGGACTTCTCCTATGGGAATTGGTAGCTGGAAAAATCCCTTATGAGGATATGACTCCAATCCAAGCAGCTTTTGCAGTTGTAGATAAGAATATTAGACCGGTCATCCCGGGGGAGTGTCCTCCAGTGATGCAGATGTTAATCGAGCAATGTTGGTGCGAGAAACCGGAGAAGAGGCCGGAGTTTTGGCAGGTGGTGAAAGTGTTAGAGCAACTTGAGAGTTGTGTTGGGGAAGATGGTACATTGATGACGAATGTAGAGGTACAGTTAGAGGGGAAGCCAAGTTGGGAAGATCACAAGAAAGGTTTAAAGCATTGGATACAGAAGTTTGGTCCTCTTCATTCTCATACTACTCTCACCTCCAAATCTAAATTCATATGA 1425 42.46 MDEDANSWLRRTKFSHTICYRLESLRLASFPVVTQPPLKSVAQSRSTLPNNLTKQRSLSPPPQTTLSGAFKDARTDQKRFSTPQPQRKEPVKEKGKRLFSKKAKVQNSLKEEKLKGPMRHLISFKGNDKFKFKESSWTKFGGGKVTAVEAEDESSIDLSKLMFGHRFAFGAHSRLYHGIYEDKVVAVKMINLPVNDENGDLAARLIKQFGREVTLLSRLHHRNVIKLVAAVKKPPVYCIITEYLPQGSLRAYLHKLEKKSLPLQKQIAIALDIARGMEYIHSQGVIHRDLKPENILIDQDFCLKIADFGIACEEAHCDTLAEDPGTFRWMAPEMIKRKPYGRKVDIYSFGLLLWELVAGKIPYEDMTPIQAAFAVVDKNIRPVIPGECPPVMQMLIEQCWCEKPEKRPEFWQVVKVLEQLESCVGEDGTLMTNVEVQLEGKPSWEDHKKGLKHWIQKFGPLHSHTTLTSKSKFI 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6357934 6359673 - CePI673135_03g005960.1 Cec03g0596 198220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0596 474 MobiDBLite consensus disorder prediction 39 100 - -
Cec03g0596 474 ProSiteProfiles Protein kinase domain profile. 161 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0596 474 Gene3D Phosphorylase Kinase; domain 1 150 244 - -
Cec03g0596 474 Gene3D Transferase(Phosphotransferase) domain 1 245 454 - -
Cec03g0596 474 Pfam Protein tyrosine and serine/threonine kinase 165 417 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0596 474 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0596 474 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0596 474 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0596 474 PRINTS Tyrosine kinase catalytic domain signature 325 335 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0596 474 PRINTS Tyrosine kinase catalytic domain signature 344 366 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0596 474 SMART serkin_6 161 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0596 474 MobiDBLite consensus disorder prediction 72 96 - -
Cec03g0596 474 PANTHER SERINE-THREONINE PROTEIN KINASE 59 420 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec03g0596 474 MobiDBLite consensus disorder prediction 39 71 - -
Cec03g0596 474 SUPERFAMILY Protein kinase-like (PK-like) 153 417 IPR011009 -
Cec03g0596 474 CDD STKc_MAP3K-like 168 417 - -
Cec03g0596 474 FunFam serine/threonine-protein kinase HT1 246 438 - -
Cec03g0596 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0596 Cec-Chr3:6357934 Cec04g1863 Cec-Chr4:37211515 6.10E-89 dispersed
Cec02g1918 Cec-Chr2:37007107 Cec03g0596 Cec-Chr3:6357934 1.90E-37 wgd
Cec03g0596 Cec-Chr3:6357934 Cec04g2011 Cec-Chr4:38272286 1.50E-167 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71831 PF07714 PK_Tyr_Ser-Thr 2.40E-60 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0596 - - - 0.0